Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00337 ATGGGTAACTCGGACTGCGAGAGTTTCAAACATGGAGTCCAAATTCCTCCATCTAAACCATTTCTAAAGTCTCTCAAATCGTCCCTCAAAGAGACTTTATTCCCTGATGATCCTTTCAGACAGTTCAAGAATCAGCCATTCTCCAGGAAGATTTTTCTCGGACTTCAGTACTTCGTGCCGATTTTTGAATGGGGTCCTCGCTATTCTTTTCACTTCTTTAAGAGTGATGTTGTTTCGGGAATCACCATCGCCAGTTTGGCTGTTCCACAGGGTATCAGCTATGCAAATTTGGCGAGCATTCCTCCCATTATTGGACTCTATTCAAGCTTTGTTCCTCCATTGATTTATGCAATGCTTGGAAGTTCAAAGGATATTGCTGTAGGAACTATTGCAGTTGTGTCTCTTCTCATGACTGCCATGCTAGGAAAAGTTGCTAACCCTAAGCAGAACCCCATCGAATATGTTCACTTGGTTTTCACTGCAACTTTCTTTGCTGGTGTCTTTCAAGCTGCCCTCGGCTTCTTAAGGCTAGGGTTTGTGGTGGATTTTCTATCGCATGCGACAATAGTAGGTTTCATGGGAGGGGCAGCTACAGTTATATGTCTTCAACAGCTGAAAGGGATTCTTGGTTTGGTTCATTTCACTCATGAAACTGATATTGTATCAGTCTCAACGTCTATTTTCTCCCAAGTTCACCAATGGAGATGGGAGACTGTCCTAATGGGCTGTTGCTTCCTTTGCTTCCTCGTCGTCTCTAGAATTTATAGCAAGAAGAAGCAATTGTTCTTCTGGATAAACGCTTTGGCTCCATTGATATCTGTGATTCTTGGAAGCCTTTTTGTCTATCTCACTCATGCTGAAAAGCATGGCGTTCGAGTTATTGGAGAGCTGAAGAAGGGGCTCAATCCAATTTCGTTGAATGACTTGGCATTTGGGTCACCATTTCTAACGACTGCCATTAAAACTGGAATCATCTCTGGTACCATTGGCCTTGCTGAAGGAGTTGCAGTGGGAAGAAGCTTTGCCACATTTAAGAACTACCACATCAATGGCAATAAAGAGATGATAGCTTTTGGGATGATGAACATCATAGGCTCTTTCACTTCTTGCTACCTAACTGGAGGACCATTCTCACGCACTGCGGTGAATTTTAATGCGGGATGCAAAAGTGCGATTTCAAATATTGTCATGGCATTTGGAGTGATGATGACTTTGTTATTTTTGACACCACTCTTCTATTACACTCCTCTTGTGGTGCTCTCTACCATAATCATCACTGCAATGCTAGGTCTAATAAACTACGAAGCTGTCATCCATCTTTGGAAGGTAGACAAATATGATTTTATGGTCTGCGTTTGCGCCTATGTCGGCGTCGTTTTCGGGAGCATCGAAATCGGCTTAATTGTAGCAAAACAGGTTTCACTTTCCATGCTAAGAGTAGTCATGTTTGTGGCAAGACCAAAGACTCTCACACTAGGAAAAATCCCCAATTCCACAATTTACCGAAGTACAAATCAATACCCAAATACAGATTCCGTACCTGGAATTCTTATTCTGCAAATTGATGCGCCAATCTACTTCGCCAACGCAAACTACCTCAGAGAAAGGGTCTTGAGGTGGATCTCCGAGGAGGAGGATCGACTCAAGTGTTTGGGAAAAACCAGCTTACAATATGTAATTCTCGATACTAGCGTTGTTAGCAGCATCGATACGAGCGGGATTAGCTTCCTCAAAGAGCTAAAGAACAATGTTGACAGGAAAGACATCAAGATTGCATCCGAAGGACTCAAGCACAGGGTTTTTGAGGTTTCATTGGCTGATCTTCAAGACGATGAAGAACACGCTTACAGAAAGATTCGATTGAGAGCTGAAGATGTTCAAGGAAGAAATGTTCTGACAAACTTCTGGGGAATGAACTTCACAACTGACAAATTAAGGTCACTGGTAAGAAAGTGGCAGACCTTGATAGAAGCCCATGTTGATGTGAAGACCACTGATAACTATACCCTGAGGATGTTTTGCATTGGATTTACCAAACGACGTCCAAATCAGGTTAAGAGGACATGTTACGCACAATCCAGCCAAATCAGACAGATTCGAGGCAAGATGAGGGAGATCATGGTAAAGCAGGCAACATCTTGTGATCTTAAGGAATTGGTTCGTAAGTTTATTCCTGAATCAATTGGTAAGGAGATTGAGAAGGCGACTTCAAGCATCTACCCTTTACAGAATGTATTTATCAGGAAAGTTAAAATCCTGAAAGCACCAAAATTTGATTTGGGAAAATTGATGGAGGTTCATGGTGATTACACAGAAGATGTTGGTGTGAAGCTGGAGAGGCCAGTCGATGAAACAATGGCCGATGCTCCAACTGAGATTGTTGGAGCTTAA 2391 42.41 MGNSDCESFKHGVQIPPSKPFLKSLKSSLKETLFPDDPFRQFKNQPFSRKIFLGLQYFVPIFEWGPRYSFHFFKSDVVSGITIASLAVPQGISYANLASIPPIIGLYSSFVPPLIYAMLGSSKDIAVGTIAVVSLLMTAMLGKVANPKQNPIEYVHLVFTATFFAGVFQAALGFLRLGFVVDFLSHATIVGFMGGAATVICLQQLKGILGLVHFTHETDIVSVSTSIFSQVHQWRWETVLMGCCFLCFLVVSRIYSKKKQLFFWINALAPLISVILGSLFVYLTHAEKHGVRVIGELKKGLNPISLNDLAFGSPFLTTAIKTGIISGTIGLAEGVAVGRSFATFKNYHINGNKEMIAFGMMNIIGSFTSCYLTGGPFSRTAVNFNAGCKSAISNIVMAFGVMMTLLFLTPLFYYTPLVVLSTIIITAMLGLINYEAVIHLWKVDKYDFMVCVCAYVGVVFGSIEIGLIVAKQVSLSMLRVVMFVARPKTLTLGKIPNSTIYRSTNQYPNTDSVPGILILQIDAPIYFANANYLRERVLRWISEEEDRLKCLGKTSLQYVILDTSVVSSIDTSGISFLKELKNNVDRKDIKIASEGLKHRVFEVSLADLQDDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRGKMREIMVKQATSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTEDVGVKLERPVDETMADAPTEIVGA 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19137569 19149662 - BLOR04356 Blo12g00337 67598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00337 796 PANTHER SULFATE TRANSPORTER 9 591 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo12g00337 796 Hamap 40S ribosomal protein S1 [RPS3A]. 482 793 IPR027500 GO:0003735|GO:0005840|GO:0006412
Blo12g00337 796 ProSiteProfiles STAS domain profile. 506 603 IPR002645 -
Blo12g00337 796 TIGRFAM sulP: sulfate permease 60 600 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo12g00337 796 ProSitePatterns Ribosomal protein S3Ae signature. 596 608 IPR018281 GO:0003735|GO:0005840|GO:0006412
Blo12g00337 796 SMART Ribosomal_S3Ae_2 563 756 IPR001593 GO:0003735|GO:0005840|GO:0006412
Blo12g00337 796 Pfam STAS domain 507 600 IPR002645 -
Blo12g00337 796 SUPERFAMILY SpoIIaa-like 507 603 IPR036513 -
Blo12g00337 796 ProSitePatterns SLC26A transporters signature. 102 123 IPR018045 GO:0008271|GO:0008272
Blo12g00337 796 PANTHER BNAA04G05880D PROTEIN 9 591 IPR030311 GO:0008272|GO:0009507|GO:0015116
Blo12g00337 796 Pfam Sulfate permease family 73 453 IPR011547 GO:0016021
Blo12g00337 796 Pfam Ribosomal S3Ae family 591 756 IPR001593 GO:0003735|GO:0005840|GO:0006412
Blo12g00337 796 CDD STAS_SulP_like_sulfate_transporter 507 603 - -
Blo12g00337 796 Gene3D STAS domain 486 620 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00525 Blo-Chr2:8656446 Blo12g00337 Blo-Chr12:19137569 4.64E-141 dispersed
Blo11g00047 Blo-Chr11:377552 Blo12g00337 Blo-Chr12:19137569 0 dispersed
Blo12g00337 Blo-Chr12:19137569 Blo12g00695 Blo-Chr12:25205369 0 dispersed
Blo10g00016 Blo-Chr10:175019 Blo12g00337 Blo-Chr12:19137569 0 transposed
Blo01g00118 Blo-Chr1:1622316 Blo12g00337 Blo-Chr12:19137569 6.76E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00337 K17471 - jre:108989479 887.871