Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00345 ATGGAGGCCGAATGCAATGGAGGTAACTCCAACGCACAAAGTTTTAGTTTAGCTGAAAATTCTCAACATCCCCAAGAAGAACGAATAGCAAGAACATGGGGTACTATAGGCCCTGGTCTACCCTATGTTGACGATGCCATTGTCAAAGACAAAAATTGGCTTGTGGGAGGTGATTTAGAAGTTATCAAGCCAATCAAGTACAATGACGGCCTTGATCGTTTTAGATTATCACCTAAAGAACTTCGAGACGAGTTTATGAGACGCAAAGCAGATGCGGTTTTTGCTTTTCAGTTGAGGAATCCTGTGCACAATGGCCATGCTTTACTGATGAATGACACTCGCCGACGGCTCCTTGAAATGGGATATGAAAACCCGATTCTCTTGCTCCATCCATTGGGCGGATATACAAAGGCTGATGATGTTCCGCTTAGCTGGCGAATGAAGCAGCATGAGAAGGTGCTTGAGGATGGTGTTCTTGATCCAGAAACGACAGTTGTTTCCATCTTTCCGTCTCCTATGCTCTATGCGGGCCCAACTGAGGTTCAGTGGCATGCGAAGGCTCGGATAAATGCAGGGGCTAACTTTTACATAGTCGGTCGGGATCCAGCTGGCATGGCCCATCCAAGAGAGAAGAGGGACCTTTATGATGCTGATCATGGGAAGAAAGTACTGAGCATGGCTCCTGGGCTTGAGCGATTGAACATCCTCCCTTTCAAGGTAGCTGCATATGATAAAACTCAGGGGAAAATGGCATTTTTTGATCCCGCAAAAGCTCAGGATTTCATTTTCATTTCTGGGACCAAGATGAGAACACTGGCGAGGAACAGCGAGAAGCCTCCGGACGGGTTTATGTGTAGGGGCGGGTGGAATGTGCTGGTTGAATACTATGATAGTTTGGGTGTTGCAAACAATGGCAGAATTCCTTTCTTAAGATCTCAGATAACTTTTGTTATGGAACAAAGAAAGAAGAACCCTGGTGTCATGTTTTGGTCTTCAATTTTATTAGATTCCTGTTTTCTGGATATGACTCTGGTGTTAGACTCCACTTTCGACAACATCCAAGGGTTTCTTGATGCATTTTCCCGCAAAAATGATAGTGGTTTGAGTGTTTGTTGTAAACCCGGAATCTCAAAACTTCGATCTGTTTTCATCGGCGTTTATTTCTCTAATGCTCTTTTGCATCGCTCTCTCAGAAGGATTAAAAAAAGTTTGTCACCTGAAATCATTCTTCTTGTTGATGAAGACGACCATGGCTTCCGCGTCGACCAGGCCACCCTCAGTGCTCTCGTCAAGGAAAGGAATCTTCAAAAGCTTGCCGAAAATGGGGGAGTGAAGAAAATAGCGTCGGATTTGAAAACGGAACTGGAGATCGGAATCAATGGGGACGAAGTGGAAATGGACCGTCGGGTGAATGCATTCGGTTCAAACACTTACAGAACGCCGCCGGCGAAGAGCTTCTTCTTCTTCGCTTGGGAAGCTCTAAAAGATCTGACGATTCTGATTCTCCTCGGTTGCGCTGCTCTTTCTCTCGGATTCGGAATCAAACAACACGGTATCAAAGAAGGATGGTACGATGGAGGAAGCATATTCGTGGCAGTTTTCATCGTAATCTTTTTTTCTGCAATTAGTAATTACAGACAAAACAAACAGTTCGAGAAATTATCAAAACTCAGTGATGATATCCAAATCGAAGTTTTTCGGCGAGGAAGACGACAACCAGTTTCCATTTTCAACATCGTCGTCGGAGACATTGTTTGTCTGAAGATTGGAGATCAGATTCCGGCCGACGGGCTGTTCGTCGACGGGTATGGTTTGCAAGTTGACGAATCGAGTATGACCGGAGAAAGTGATCCCGTGGAAGTAAATCGCACTGAGAATCCATTTTTGATTTCTGGTACTAAAGTGGTTGATGGATTTGGACAAATGATCGTCACTTCGGTAGGGATGAATACTACCTGGGGAGAAATGATGAGCTCGATTAGTAGAGATATGGCGGAACAGACGCCATTACAAGCAAGGTTGGATAAGCTTACCTCCTCGATCGGAAAGGTAGGTCTAACAGTGGCGTCTTTAGTTCTTGTGGTTTTGTTAGTACGATATTTTACCGGAAATACAGAAGACGAGAATGGAAATCCGGAGTTTGTTAGAGGGACAACAAAGTCCGACGATGTCATTAATGGCGTTATCGCAATTATTGCTGCGGCTGTAACTATCGTCGTCGTTGCGATTCCGGAAGGGCTACCACTGGCTGTGACGTTAACTCTTGCTTATTCGATGAAGAGAATGATGGCAGATCAGGCTATGGTGAGAAAGCTTTCTGCCTGCGAAACTATGGGGTCGGCTACCACAATTTGTACCGACAAAACGGGGACTCTAACGATGAACAAGATGAAGGTGACGAAATTCCTAGTCGGTGGAGATCAGTCAATGACGGCGGCGAATATTTCTCAAGCTCTTCTAGAGATTCTTCATCAAGCGGTAGGATTAAACACTACGGGAAGCGTTTACAAGGCTGTTTCGTCGGAATCGGAGATTGAGTTCTCCGGGAGTCCGACGGAGAAAGCTATTCTTTCTTGGGCTGTCATGGAGATGAAGATGAAAATGGAAGAAATTACAAAAAACCATACAACACTCCACGTGGAAACCTTCAATTCGAAGACGAAAAGAAGCGGGGTTTTGATAAAAAGGAACATACAGAGCTTTAACAATGGCGGTCATGTCCATTGGAAAGGAGCAGCAGAAATGATACTAGCGATGTGTTCGAGCTACTACGACATTAATGGAGCAAAAAAGGATCTCAAAGAAGACGAAAAGGTGAATTTCGAGCGAATAATTCAAGGAATGGCCGCCAGTAGTCTCAGATGCATAGCTTTTGCACATACAGAAATTGCAGAGCTAGAGATTGAGGATGGACCAGATCGCCAGAAACTGAAAGAAGAGGGCTTGACCCTTATCGGTTTCGTTGGAATTAAAGACCCATGTAGGTCGGGGGTGAGAGACGCCGTCGAGGGCTGCCAGTACTCTGGCGTGAATGTGAAAATGATCACCGGAGACAACATTTTTACGGCGAAAGCAATTGCCACAGAGTGTGGAATTCTCCGGCCAAACATGGGAGAAGAAGCGGTGGTCGAAGGAGCAGAATTCAGAAACTACACACCGGAAGAAAGATTACGGAAAGTAGATCAAATCCGCGTAATGGCAAGATCTTCACCCTTCGACAAACTTCTAATGGTGCAGTGCCTGAAACAGAAAGGCCACGTCGTCGCCGTCACTGGCGACGGAACGAACGACGCTCCGGCGCTGAAAGAAGCCGACATCGGACTCTCTATGGGAATCCAAGGAACAGAAGTGGCAAAAGAAAGCTCCGACATAGTAATAATGGACGACAACTTCTCCTCCGTCGTAACAGTTCTAAAATGGGGAAGATGCGTCTATACCAACATTCAAAAATTCCTCCAGTTCCAACTCACCGTCAACGTCGCCGCGCTCGTTATAAACTTCATTGCCGCAGTCTCCGCCGGAGAAGTACCATTAACGGCAGTCCAACTTCTCTGGGTAAACCTAATAATGGACACTCTAGGAGCTCTAGCTCTAGCCACAGAAGGACCCACAAAAGATCTAATGGACAAAAAACCAGTGGGTCGAACTGAGCCTCTAATAACAAACGCAATGTGGAGAAACCTTCTAGCCCAAGCTTTTTACCAGATCGCTATTCTTCTAGTTCTGCAGTTTGAAGGGGAAGCCATTTTTGGGGTGAGCAAGAAGGTGAAGGAGACGTTGATCTTCAACACCTTCGTCTTGTGTCAAGTTTTCAACGAGTTTAATGCGAGGAAGATAGAGAAGAGGAATGTTTTCAAGGGAATTCTGAAGAATAAGCTGTTCTTGGGGATCGTCGGGTTTACAGTTGCTCTTCAGGTGGTGATGGTGGAGTTTCTGAAGAGATTTGCAGGCACTGAGAGGCTGACTTTCAGGGAGTGGGGAGTTTGTGTGGCGATGGCTTCCGTGACTTGGCCGATTGGTTGGGTTGTTAAGCTTATTCCTGTCCCGGATAGGCCTGTCCTCAGTTATCTTAATATGGGAACAACACTCACGCACTTGTTTAGGTAG 4107 45.68 MEAECNGGNSNAQSFSLAENSQHPQEERIARTWGTIGPGLPYVDDAIVKDKNWLVGGDLEVIKPIKYNDGLDRFRLSPKELRDEFMRRKADAVFAFQLRNPVHNGHALLMNDTRRRLLEMGYENPILLLHPLGGYTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMAHPREKRDLYDADHGKKVLSMAPGLERLNILPFKVAAYDKTQGKMAFFDPAKAQDFIFISGTKMRTLARNSEKPPDGFMCRGGWNVLVEYYDSLGVANNGRIPFLRSQITFVMEQRKKNPGVMFWSSILLDSCFLDMTLVLDSTFDNIQGFLDAFSRKNDSGLSVCCKPGISKLRSVFIGVYFSNALLHRSLRRIKKSLSPEIILLVDEDDHGFRVDQATLSALVKERNLQKLAENGGVKKIASDLKTELEIGINGDEVEMDRRVNAFGSNTYRTPPAKSFFFFAWEALKDLTILILLGCAALSLGFGIKQHGIKEGWYDGGSIFVAVFIVIFFSAISNYRQNKQFEKLSKLSDDIQIEVFRRGRRQPVSIFNIVVGDIVCLKIGDQIPADGLFVDGYGLQVDESSMTGESDPVEVNRTENPFLISGTKVVDGFGQMIVTSVGMNTTWGEMMSSISRDMAEQTPLQARLDKLTSSIGKVGLTVASLVLVVLLVRYFTGNTEDENGNPEFVRGTTKSDDVINGVIAIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMADQAMVRKLSACETMGSATTICTDKTGTLTMNKMKVTKFLVGGDQSMTAANISQALLEILHQAVGLNTTGSVYKAVSSESEIEFSGSPTEKAILSWAVMEMKMKMEEITKNHTTLHVETFNSKTKRSGVLIKRNIQSFNNGGHVHWKGAAEMILAMCSSYYDINGAKKDLKEDEKVNFERIIQGMAASSLRCIAFAHTEIAELEIEDGPDRQKLKEEGLTLIGFVGIKDPCRSGVRDAVEGCQYSGVNVKMITGDNIFTAKAIATECGILRPNMGEEAVVEGAEFRNYTPEERLRKVDQIRVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVIMDDNFSSVVTVLKWGRCVYTNIQKFLQFQLTVNVAALVINFIAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEGPTKDLMDKKPVGRTEPLITNAMWRNLLAQAFYQIAILLVLQFEGEAIFGVSKKVKETLIFNTFVLCQVFNEFNARKIEKRNVFKGILKNKLFLGIVGFTVALQVVMVEFLKRFAGTERLTFREWGVCVAMASVTWPIGWVVKLIPVPDRPVLSYLNMGTTLTHLFR 1368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19397056 19404560 + BLOR04364 Blo12g00345 67606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00345 1368 Gene3D HUPs 69 302 IPR014729 -
Blo12g00345 1368 SUPERFAMILY Calcium ATPase, transduction domain A 563 659 IPR008250 -
Blo12g00345 1368 Pfam ATP-sulfurylase 73 295 IPR024951 GO:0004781
Blo12g00345 1368 Pfam E1-E2 ATPase 562 763 - -
Blo12g00345 1368 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 1062 1171 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00345 1368 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 727 839 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00345 1368 SFLD p-type atpase 767 1144 IPR044492 -
Blo12g00345 1368 SMART Cation_ATPase_N_a_2 438 514 IPR004014 -
Blo12g00345 1368 MobiDBLite consensus disorder prediction 1 23 - -
Blo12g00345 1368 Gene3D - 464 661 - -
Blo12g00345 1368 Pfam Cation transporting ATPase, C-terminus 1176 1346 IPR006068 -
Blo12g00345 1368 Gene3D - 782 1136 IPR023214 -
Blo12g00345 1368 MobiDBLite consensus disorder prediction 1 26 - -
Blo12g00345 1368 ProSitePatterns E1-E2 ATPases phosphorylation site. 787 793 IPR018303 -
Blo12g00345 1368 PANTHER CATION TRANSPORTING ATPASE 382 1335 - -
Blo12g00345 1368 SUPERFAMILY Calcium ATPase, transmembrane domain M 441 1348 IPR023298 -
Blo12g00345 1368 CDD P-type_ATPase_Ca_PMCA-like 467 1224 - -
Blo12g00345 1368 PANTHER CALCIUM-TRANSPORTING ATPASE 382 1335 - -
Blo12g00345 1368 SUPERFAMILY PUA domain-like 21 69 IPR015947 -
Blo12g00345 1368 SUPERFAMILY HAD-like 783 1196 IPR036412 -
Blo12g00345 1368 Gene3D - 492 1345 - -
Blo12g00345 1368 Pfam haloacid dehalogenase-like hydrolase 782 1105 - -
Blo12g00345 1368 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 791 998 IPR023299 GO:0000166
Blo12g00345 1368 Gene3D Sulfate adenylyltransferase 10 68 - -
Blo12g00345 1368 SUPERFAMILY Nucleotidylyl transferase 73 296 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 785 799 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 1008 1018 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 1091 1110 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 1115 1127 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 608 622 - -
Blo12g00345 1368 PRINTS P-type cation-transporting ATPase superfamily signature 986 997 - -
Blo12g00345 1368 SFLD C1.7: P-type atpase like 767 1144 - -
Blo12g00345 1368 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 423 1348 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Blo12g00345 1368 Gene3D - 795 993 IPR023299 GO:0000166
Blo12g00345 1368 PRINTS H+-transporting ATPase (proton pump) signature 941 959 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00345 1368 PRINTS H+-transporting ATPase (proton pump) signature 1123 1148 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00345 1368 PRINTS H+-transporting ATPase (proton pump) signature 1091 1107 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00345 1368 Pfam Cation transporter/ATPase, N-terminus 441 509 IPR004014 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00593 Blo-Chr2:11397055 Blo12g00345 Blo-Chr12:19397056 1.74E-180 dispersed
Blo02g00768 Blo-Chr2:25797009 Blo12g00345 Blo-Chr12:19397056 6.21E-26 dispersed
Blo06g00423 Blo-Chr6:24479555 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo07g00236 Blo-Chr7:2970799 Blo12g00345 Blo-Chr12:19397056 1.05E-175 dispersed
Blo10g00304 Blo-Chr10:4545456 Blo12g00345 Blo-Chr12:19397056 2.01E-159 dispersed
Blo10g00305 Blo-Chr10:4574950 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo10g00944 Blo-Chr10:28508262 Blo12g00345 Blo-Chr12:19397056 0 dispersed
Blo16g00829 Blo-Chr16:34712797 Blo12g00345 Blo-Chr12:19397056 2.39E-164 dispersed
Blo12g00345 Blo-Chr12:19397056 Blo12g00987 Blo-Chr12:27907713 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00345 K01537 - vvi:100254571 1357.43