Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00363 ATGAATGATCAAAACAGTCGAGAAGAAGATGAAGACGAGAGAGAAAATGGATCAGACGAGCCCAAAGAAGGAGCCGTGGAGATCGGCAATCGAAGACCAAGAGGCCGCCCTCCAGGATCCAAAAACAAGCCGAAACCACCGATTTTCGTGACTCGAGACAGCCCAAACGCCCTCCGCAGCCACGTAATGGAAGTAGCCGGTGGGGCTGACGTCGCAGAGAGCGTCGCTCAGTTCGCTAGGCGTAGGCAGCGCGGCGTGTGCGTGCTGAGCGCTAGCGGCTCAGTCACTAACGTCACTCTCCGACAGCCAGCAGCACCTAGTGCTGTGGTGGCGCTGCATGGACGGTTCGAGATTTTGTCACTGACCGGAGCTTTCTTGCCCGGACCAGCCCCACCAGGGTCGACGGGTATGACCATTTATCTCGCCGGAGGACAAGGGCAGGTGGTTGGTGGTTGTGTAGTTGGGTCATTAGTTGCAGCTGGGCCAGTAATGGTGATTGCTGCAACTTTTTCTAACGCCACTTACGAAAGATTACCCCTCGAAGAAGACGATGATCATGAAGGTGGTATTGGCAGTACCGGAGCTGGAACCTCTCCGCCTTCTATTGGAGGCAGTGGAGGGAGTTTTCAGCCGAATTCGGCTAATCTTTCTGCACTTCCTGTTTATAATTTGCCTCCTAATCTTCTCCCCAATGGAGGTCAGCTTGGACATGATCAGGCTGCATATGCTGCATGGGCTTCGCATGGGAGACCTAGCTTCTGA 762 54.33 MNDQNSREEDEDERENGSDEPKEGAVEIGNRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSASGSVTNVTLRQPAAPSAVVALHGRFEILSLTGAFLPGPAPPGSTGMTIYLAGGQGQVVGGCVVGSLVAAGPVMVIAATFSNATYERLPLEEDDDHEGGIGSTGAGTSPPSIGGSGGSFQPNSANLSALPVYNLPPNLLPNGGQLGHDQAAYAAWASHGRPSF 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 19811216 19811977 - BLOR04382 Blo12g00363 67624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00363 253 PIRSF ESCAROLA 1 253 IPR014476 GO:0003680
Blo12g00363 253 Pfam Plants and Prokaryotes Conserved (PCC) domain 59 172 IPR005175 -
Blo12g00363 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 1 252 - -
Blo12g00363 253 ProSiteProfiles PPC domain profile profile. 55 191 IPR005175 -
Blo12g00363 253 SUPERFAMILY AF0104/ALDC/Ptd012-like 55 184 - -
Blo12g00363 253 CDD DUF296 59 142 IPR005175 -
Blo12g00363 253 MobiDBLite consensus disorder prediction 194 209 - -
Blo12g00363 253 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 252 IPR014476 GO:0003680
Blo12g00363 253 MobiDBLite consensus disorder prediction 1 54 - -
Blo12g00363 253 MobiDBLite consensus disorder prediction 1 17 - -
Blo12g00363 253 MobiDBLite consensus disorder prediction 182 209 - -
Blo12g00363 253 Gene3D - 58 187 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00266 Blo-Chr4:2021023 Blo12g00363 Blo-Chr12:19811216 6.16E-78 dispersed
Blo12g00363 Blo-Chr12:19811216 Blo04g00121 Blo-Chr4:1017347 1.35E-70 dispersed
Blo01g00096 Blo-Chr1:1373199 Blo12g00363 Blo-Chr12:19811216 1.64E-139 wgd
Blo12g00363 Blo-Chr12:19811216 Blo07g00251 Blo-Chr7:3091540 1.39E-62 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00363 - - mesc:110601522 309.686