Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00379 ATGCTTCTCTGCTCTCCCAGTGACCAATGCCACCCAGCTTGTAATGCTCTGGCATACACAGACTCGACTCTTACCATATCTATCACGAAACTTCCTCCCTCCTCCATTTCTCTTGAGAAGCGCAGAATCACTGCTTGCATTTTGGTTTGGATCTTGGCTCCCACCACATACATTTTTTTTGCATCAGCAATTCCCGTTATTTCATTCGGAGAACAATTGGAAAGAGATACTGATGGAGTTCTCACAGCAGTTCAAACATTAGCTTCTACTGCATTATGTGGAATTATACACTCTGTTATAGGAGGTCAGCCTTTGTTGATTCTCGGTGTCGCAGAGCCTACTGTCCTTATGTATACTTTCATGTTCAATTTTGCTAAAGATCGACCAGAACTGGGATCAAAGCTTTTTCTAGCCTGGGCTGGATGGGTATGTGTATGGACTGCATTATTGCTTTTCCTGTTGGCTATCTTAGGTGCTTGCTCCATCATCAATAGATTCACTCGTGTTGCGGGAGAGCTGTTTGGCCTTCTCATTGCAATGCTTTTCATGCAACAAGCTATCAAAGGACTGGTGGATGAGTTTGGTATACCAGAAAGGGAAAATCCAAAACTAACTGAGTTTCAACCTTCATGGAGATTTGCAAATGGGATGTTTGCTTTGGTTCTCTCATTTGGTCTGCTGATTACTGGATTAAAAAGCAGAAAAGCTCGGTCTTGGCGTTATGGATCTGGTTGGATGCGAGGCTTCATTGCTGATTATGGCGTCCCTCTGATGGTTTTGGTATGGTCAGCCATTTCCTATCTACCATCTGGAAATGTTCCTGCAGGAATTCCAAGGCGTCTCTTCAGTCCAAATCCATGGTCTGTTGGTGCATACGATAATTGGACAATTATCAAGGCATTTATAACTTCACAGGAAATGCTAAATGTGCCCGTTCTTTACATAGTAGGAGCTTTCATTCCAGCGACGATGATTGCCGTGCTATACTATTTTGACCACAGTGTAGCTTCTCAACTTGCTCAGCAAAAGGAATTCAACTTGAGAAAGCCGCCTTCTTTCCATTATGATTTGCTTCTTTTGGGGTTCATGGTTATCTTGTGTGGGCTAATTGGGATTCCTCCAGCAAACGGTGTCATTCCACAGTCTCCCATGCATACAAAAAGTCTGGCTACACTGAAGCATCAGTTACTCCGCCGTCGCCTTGTGGAAACGGCATGGAAAGGTATGAAACAAAATGCAAGCTTGGAGCAAGTGTATCAAAGTATGCAAGAAGCCTACCAACAAATGCAGACTCCATTGTTTGGCCAGGAACCTTCAGCTCGTGGATTAAAGGAAATGAAAGAATCAACAATCCAAATCGCTTCTTGTACTGGAAACATAGATGCCTCAATTGACGACACTATGATTGACGTTGAGAAAGAGATTGATGACTTGTTGCCTGTTGAGGTGAAAGAACAGCGGCTAAGTAACTTGCTTCAAGCTACAATGGTGGGAGCATGTGTTGCACTCATGCCCTTCCTTAAAAAGATCCCAACCTCCATACTTTGGGGCTATTTTGCCTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTTTGGGAAAGGATTCTATTGCTTTTCACTGCTCCAAGCAGACGATACAAGGTTCTAGAGGATTGCCATGCCACTTTTGTGGAGACAGTACCTTTCAAGACAATTGCCATATTTACGGCTTTTCAAACTGCTTACTTGTTGGTTTGTTTTGGGATTACATGGGTTCCGATAGCTGGAGTTCTGTTCCCCTTAATGATCTTGCTCTTGGTTCCTGTCAGACAATACATTTTGCCCAAGTTTTTTAAAGGGGTTCACCTCCAAGATTTAGATGCTGCTGAATATGAAGAGGCTCCAATGCTTTCCTTCAACCTGAGTCGTGTGAGAGAGATGGGGAGCAATGCATCATTTGCTGACAGTGGAGAGATGTTTGATGGTATAATCACTCGAAGCCGAGGAGAGATAATCCGCACATGGAGTCTCAAGATATTGAGCTCCCCTGCAACACCGAGAGAAATGAAAAGTCCAGACTTCAATCAGAGTCCTCGACTTGTAGGACGAAGTCCTTTAAGTACAATGGATGCAGACTAA 2121 43.66 MLLCSPSDQCHPACNALAYTDSTLTISITKLPPSSISLEKRRITACILVWILAPTTYIFFASAIPVISFGEQLERDTDGVLTAVQTLASTALCGIIHSVIGGQPLLILGVAEPTVLMYTFMFNFAKDRPELGSKLFLAWAGWVCVWTALLLFLLAILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVDEFGIPERENPKLTEFQPSWRFANGMFALVLSFGLLITGLKSRKARSWRYGSGWMRGFIADYGVPLMVLVWSAISYLPSGNVPAGIPRRLFSPNPWSVGAYDNWTIIKAFITSQEMLNVPVLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPANGVIPQSPMHTKSLATLKHQLLRRRLVETAWKGMKQNASLEQVYQSMQEAYQQMQTPLFGQEPSARGLKEMKESTIQIASCTGNIDASIDDTMIDVEKEIDDLLPVEVKEQRLSNLLQATMVGACVALMPFLKKIPTSILWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDCHATFVETVPFKTIAIFTAFQTAYLLVCFGITWVPIAGVLFPLMILLLVPVRQYILPKFFKGVHLQDLDAAEYEEAPMLSFNLSRVREMGSNASFADSGEMFDGIITRSRGEIIRTWSLKILSSPATPREMKSPDFNQSPRLVGRSPLSTMDAD 706
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 20242750 20247391 + BLOR04398 Blo12g00379 67640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00379 706 MobiDBLite consensus disorder prediction 678 706 - -
Blo12g00379 706 Pfam HCO3- transporter family 481 571 IPR011531 GO:0006820|GO:0016021
Blo12g00379 706 Pfam HCO3- transporter family 47 194 IPR011531 GO:0006820|GO:0016021
Blo12g00379 706 Pfam HCO3- transporter family 216 394 IPR011531 GO:0006820|GO:0016021
Blo12g00379 706 PANTHER BORON TRANSPORTER 3-RELATED 50 685 - -
Blo12g00379 706 MobiDBLite consensus disorder prediction 682 697 - -
Blo12g00379 706 PANTHER ANION EXCHANGE PROTEIN 50 685 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00091 Blo-Chr10:894939 Blo12g00379 Blo-Chr12:20242750 0 dispersed
Blo12g00379 Blo-Chr12:20242750 Blo16g00228 Blo-Chr16:5098290 0 dispersed
Blo12g00379 Blo-Chr12:20242750 Blo04g00732 Blo-Chr4:6791446 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00379 K24194 - qsu:112032787 1078.16