Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00413 ATGTCGCAGTTTCAATTCCTCCTCTTCCTCTCTTTGGTTGTCTTCCTCTCCAACGAAGGTTTTTCACAGCCAAACGAGTTCTCTTACCCTGGATTCAAGGAGGGGGAACCTGGATTGAGCTTAGACGGAACGGTGCAGACGGTAAATGGTATTTTGAGGTTAACCAACGACACGCCTCGATTAGTGGGTCACGCATTTTATGCTTCTCCTTTTCAGTTCAAGAATTCCTCCAATGGCAGAGTTTTTTCTTTCTCTTCTTCGTTTGTTTTTGGTGTGGTTCCTCAATATCCCAATCTCGGCGGCCATGGATTGGCTTTCACTGTTGCTCCATCAAAGGTTTTTGAATCTCTGCCCAGTCAATTTTTGGGTCTCATGGAGGACGGCGACCTGGGTAATTCATCCAAGCACCTCCTCGCCGTTGAGTTCGACACTGTTCAGAACGATGAGTTCGGCGATATCAACGATAATCATGTCGGAATCAACATTAACAATTTGCGTTCGAATGTGTCGTCCCCCGCCGAGTATTTCTCCGATGAGTTTACGAAACATGATCTGCATCTGATTGGTGGAAAAGCCATTAAAGCTTGGATTGATTACGATTCCGAGACATTTGTTCTAAATGTGACGATTTCTCCATCGTCTACAAAACCATCCAAGCCGATTTTATCATTCATGGTAGATTTGTCGCCGATTTTGAAGGATTATATGTATGTTGGATTCTCCGCTGCAACTGGATTGCTTACTAGCTCTCACTATATTTTAGGGTGGAGCTTCAAGATGAACGGACAAGCCCAAGAGCTCGATATGTCCTCTCTTCCTCTACTTCCAGCTCCAGTTAAAGAAACCCAGGAAAAGCAGACAGCTTTAATAATTGGAATTTCATCAGTTTCGGCCATTCTACTACTTGTTTTCACAGTGACTATTATTGTTTATCTTGTGAGAAAAATCAAGAACGCTGATATAATCGAGCCATGGGAACTTCAAATGGGTCCACATAGATACTCCTACAAAGAGCTCAAGCAAGCGACAAAAGGTTTTAGAGACAAAGAGCTCCTCGGCTATGGCGGATTCGGAAGTGTCTATAAAGGAATTTTGCCGAATTCAACAAACCAAATCGCAGTTAAAAGAATCTCCCGAGAATCAAAACAGGGTTTGAGAGAATTCCTCTCCGAAATCGATACCATTGGCCGGCTTCGACACCGGAACTTAGTTCAACTGCTAGGATGGTGCCGCCGGCGAGGCGATCTTTTAATAGTATACGATTTCATGGCGAACGGAAGCTTGGATAAGATCCTTTTCGACAACCCTAAGACAATCTTGAGTTGGGAGCAACGATTCAAGATCATAAAGGACGTCGCTTCAGGACTTCTGTATTTACACGACGGGTATGAACGGTTGGTAATTCACAGAGACGTAAAAGCAAGCAACATCTTGCTCGACGGCGAGTTAACCGGAAAAGTTGGAGATTTTGGGTTAGCTAGACTGTCCGAACACGGCGCTAATCCTAGCACGACGAAGGTCGTTGGCACTTTAGGCTATCTAGCGCCGGAACTACCGAGAACGGGGAAAGCCACAACCAGTACAGACGTATTCGCGTTCGGAGCTCTACTGCTCGAAGTTGCAAGCGGAAGAAGACCCATCGAACAAAAAGCCATGCCGGAGGAGCTAGTTTTGGTGGATTGGGTGTTCGATAAGTACAGAGAAGGGGCCATTTTCGACGTGGTTGATCGGAAGCTCAACGGTGAGTACGACGAGGTTGAAATGGCGCTGGTTTTGAAACTGGGGCTGATGTGCTCTAGCAATTTGCCGGCGGCTCGGCCGAGCATGAGGGAGGTAGTAAGGTATTTGGACGGGGTGATTGGTTTGCCCGAAGAATTGATTTGCGCCTGTGGGTACGACGGATGGAAGAGCGGGCACGGCGACGGGTTCGATGATTTTTTCAACTGTCTTACATCTTCTTCATCCACTCGGGCGACCTTTTATTCCGTCTCTGCAAATAGAGACATGCACGCCAGCTTTGTTTCTCTATCAACTTCTCCGGGTCACTTCTGCAGTAGACATTGA 2064 46.32 MSQFQFLLFLSLVVFLSNEGFSQPNEFSYPGFKEGEPGLSLDGTVQTVNGILRLTNDTPRLVGHAFYASPFQFKNSSNGRVFSFSSSFVFGVVPQYPNLGGHGLAFTVAPSKVFESLPSQFLGLMEDGDLGNSSKHLLAVEFDTVQNDEFGDINDNHVGININNLRSNVSSPAEYFSDEFTKHDLHLIGGKAIKAWIDYDSETFVLNVTISPSSTKPSKPILSFMVDLSPILKDYMYVGFSAATGLLTSSHYILGWSFKMNGQAQELDMSSLPLLPAPVKETQEKQTALIIGISSVSAILLLVFTVTIIVYLVRKIKNADIIEPWELQMGPHRYSYKELKQATKGFRDKELLGYGGFGSVYKGILPNSTNQIAVKRISRESKQGLREFLSEIDTIGRLRHRNLVQLLGWCRRRGDLLIVYDFMANGSLDKILFDNPKTILSWEQRFKIIKDVASGLLYLHDGYERLVIHRDVKASNILLDGELTGKVGDFGLARLSEHGANPSTTKVVGTLGYLAPELPRTGKATTSTDVFAFGALLLEVASGRRPIEQKAMPEELVLVDWVFDKYREGAIFDVVDRKLNGEYDEVEMALVLKLGLMCSSNLPAARPSMREVVRYLDGVIGLPEELICACGYDGWKSGHGDGFDDFFNCLTSSSSTRATFYSVSANRDMHASFVSLSTSPGHFCSRH 687
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21258088 21260151 - BLOR04432 Blo12g00413 67674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00413 687 CDD STKc_IRAK 352 618 - -
Blo12g00413 687 ProSiteProfiles Protein kinase domain profile. 346 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00413 687 Pfam Legume lectin domain 26 272 IPR001220 GO:0030246
Blo12g00413 687 Pfam Protein tyrosine and serine/threonine kinase 349 615 IPR001245 GO:0004672|GO:0006468
Blo12g00413 687 SUPERFAMILY Protein kinase-like (PK-like) 328 624 IPR011009 -
Blo12g00413 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Blo12g00413 687 CDD lectin_legume_LecRK_Arcelin_ConA 26 262 IPR001220 GO:0030246
Blo12g00413 687 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Blo12g00413 687 Gene3D - 24 272 - -
Blo12g00413 687 SMART serkin_6 346 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00413 687 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Blo12g00413 687 PANTHER - 7 675 - -
Blo12g00413 687 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 7 675 - -
Blo12g00413 687 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 279 IPR013320 -
Blo12g00413 687 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Blo12g00413 687 Gene3D Transferase(Phosphotransferase) domain 1 423 624 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g01406 Blo-Chr7:34097301 Blo12g00413 Blo-Chr12:21258088 3.33E-135 dispersed
Blo09g00547 Blo-Chr9:16767372 Blo12g00413 Blo-Chr12:21258088 9.84E-132 dispersed
Blo12g00413 Blo-Chr12:21258088 Blo12g00422 Blo-Chr12:21588927 0 dispersed
Blo12g00413 Blo-Chr12:21258088 Blo12g00417 Blo-Chr12:21420963 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84573 PF07714 PK_Tyr_Ser-Thr 1.60E-44 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00413 - - jre:109006813 886.715