Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00417 ATGGCCAACTTTCAATTTCTCAGCTTCTTCTCTGCTATCATCTTCCTCACAGTGCCTTCTTTTTCCCAGCCCACCGACCTCTTCTATGCTGGATTCTCCAACGCCGGAGCAAATCTAACCTTAATCGGCATAGCGGAGATTGGGGACAATGGAATTTTGAAGCTGACTAACGAGACCAGTAGATTACTGGGTAGAGCTTTTTATGCTTCCCCTTTTCAGTTTAAGAACTCTTCAAATGGTAAAGTTTTCTCTTTTTCTTCCTCATTTGCTTTCGGAATAATTCCTCAGTACCCGAAGCTCGGTGGCCATGGATTGGCCTTCGCCATAGCTCCATCGAAGGACTTCAAAGCTCTTCCCGTTCAGTATCTGGGTCTCCTTAATTCCAACAACACGGGTGATTTCTCAAACCATCTCTTCGCCGTTGAGTTCGATACTGTTCAGGATTTTGAGTTCGGAGATATCAACGATAACCATGTCGGAATCGACATCAACAGTATGGAGTCGAATGCTTCCACCGCCGCCGGTTATTACACCGATGAATTGACGAAACAGGATCTGAATCTGAAAGGTGGGACAGCCATCAAAACTTGGATCGATTACGATTCAGTGAATTCTATTTTTAATGTGACGATTTCGCCATTTTCTACCAAGCCAAAGAAACCCATCTTGTCATTCAAGGTAGATCTCTCGCCCATTTTTAAGGATTACATGTATGTCGGATTCTCTGCTTCAACTGGTTTGCTCGCTAGCTCACATTATGTATTAGGATGGAGCTTCAAGATGAACGGACAAGCTCAAGAGCTCGATTTATCCTCTCTTCCGTCACTCCCAGTTGTAGAACCCCCGAAAAAGCAGACAACTTTAACAATTGGAGTTTCAGTTGTGGCTACCATCGTACTGGTTTTCGCAGTAATTTCCTTCGCTTATCTCGTAAGAAAAATCAAGAACGCTGATATAACCGAGCCATGGGAGCTTCAAGTGGGTCCACATAGATACTCCTACAAAGAGCTCAAGCAAGCGACCAGAGGTTTTAGAGACAAAGAGCTCCTCGGCCGTGGTGGATTCGGAAAAGTCTACAAAGGATTGTTACCGAAATCAAAAACCCAAATCGCAGTAAAGCGAATTTCCCGCGAATCAAAACAGGGTCTGCGCGAATTCGCCTCCGAAATAGGCACCATTGGCCGGCTTCGTCACCGGAACTTAGTTCAGCTCCTCGGATGGTGCCGTCGGGGCGGCGATCTTCTTCTTGTTTACGAGTTTATGGCGAACGGAAGCTTGGACCAGATCCTTTTCGACGACTCAAAAACGATTTTGAATTGGGAACAAAGATTTAAGATCATAAAGGACGTTGCTTCGGGGCTTTTATATCTGCACGAAGGTTTCGAACAGGTGGTGATTCACAGAGATGTAAAAGCAAGCAACGTTTTGCTCGATAGTGATTTGACGGCGAAAGTCGGAGATTTTGGGCTAGCTAGGCTCTACGAACACGGAGCAAATCCGAGCACGACGAGGGTCGTCGGAACTTTAGGGTATCTAGCTCCGGAAATACCGAGAACCGGTAAAGCCACCACCAGCACAGATGTATTCGCGTTCGGAGCTCTTCTGCTGGAAGTTGCGACGGGAAGAAGACCCATTGAGCAGAAAGCTAAGCCGGAGGAGGTAGTTTTGATCGATTCGGTGTGGGATAAGTACAAGGAGGGAGCTATTTTTGATGTGGTTGATCGGAAACTGAACGGCGACTACGACGAGGTTGGAATGGCTGTGGTTTTGAAGCTGGGGTTGATGTGTTCGAACAACTCTCCGGTGAAACGGCCGACCATGAGGCAGGTCGTGAGGTATTTGGAGGGGGAGATTGGTTTGGCGGACGATTTGATGGCTGCCGGCGGTTACGACGGCGGAAAGGACCGTCACGGCGATGGGTTTGATGAATTTATTAACTCTTTTGCTTCTTCTTCGTTCAACCCTGCTACCTCTGACTCCTTCGCTGCACATAGGGATATGGATAGTGGCTTTGATTCTCTTTCTCCTAGTCCTCTCATTTGTGGAGACTAA 2052 46.93 MANFQFLSFFSAIIFLTVPSFSQPTDLFYAGFSNAGANLTLIGIAEIGDNGILKLTNETSRLLGRAFYASPFQFKNSSNGKVFSFSSSFAFGIIPQYPKLGGHGLAFAIAPSKDFKALPVQYLGLLNSNNTGDFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSMESNASTAAGYYTDELTKQDLNLKGGTAIKTWIDYDSVNSIFNVTISPFSTKPKKPILSFKVDLSPIFKDYMYVGFSASTGLLASSHYVLGWSFKMNGQAQELDLSSLPSLPVVEPPKKQTTLTIGVSVVATIVLVFAVISFAYLVRKIKNADITEPWELQVGPHRYSYKELKQATRGFRDKELLGRGGFGKVYKGLLPKSKTQIAVKRISRESKQGLREFASEIGTIGRLRHRNLVQLLGWCRRGGDLLLVYEFMANGSLDQILFDDSKTILNWEQRFKIIKDVASGLLYLHEGFEQVVIHRDVKASNVLLDSDLTAKVGDFGLARLYEHGANPSTTRVVGTLGYLAPEIPRTGKATTSTDVFAFGALLLEVATGRRPIEQKAKPEEVVLIDSVWDKYKEGAIFDVVDRKLNGDYDEVGMAVVLKLGLMCSNNSPVKRPTMRQVVRYLEGEIGLADDLMAAGGYDGGKDRHGDGFDEFINSFASSSFNPATSDSFAAHRDMDSGFDSLSPSPLICGD 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21420963 21423014 + BLOR04436 Blo12g00417 67678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00417 683 CDD lectin_legume_LecRK_Arcelin_ConA 29 263 IPR001220 GO:0030246
Blo12g00417 683 Gene3D Transferase(Phosphotransferase) domain 1 421 624 - -
Blo12g00417 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Blo12g00417 683 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Blo12g00417 683 SMART serkin_6 344 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00417 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 279 IPR013320 -
Blo12g00417 683 SUPERFAMILY Protein kinase-like (PK-like) 326 616 IPR011009 -
Blo12g00417 683 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00417 683 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 8 668 - -
Blo12g00417 683 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Blo12g00417 683 Gene3D - 25 270 - -
Blo12g00417 683 Pfam Legume lectin domain 28 273 IPR001220 GO:0030246
Blo12g00417 683 PANTHER - 8 668 - -
Blo12g00417 683 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00417 683 CDD STKc_IRAK 350 616 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01103 Blo-Chr1:39310081 Blo12g00417 Blo-Chr12:21420963 0 dispersed
Blo12g00417 Blo-Chr12:21420963 Blo12g00422 Blo-Chr12:21588927 0 dispersed
Blo12g00413 Blo-Chr12:21258088 Blo12g00417 Blo-Chr12:21420963 0 proximal
Blo12g00417 Blo-Chr12:21420963 Blo12g00421 Blo-Chr12:21568192 3.73E-108 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84574 PF00069 Pkinase 8.60E-48 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00417 - - jre:109006813 952.97