Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00421 ATGGCTAACGGAAGCTTGGACCAGATCCTTTTCGACGACTCAAAAATGATTTTGAATTGGGAGCAACGATTTAAGATCATAAAGGACGTTGCTTCGAGGCTTTTATATCTACACGAAGGCTTCGATCAGGTGGTTATTCACATAGATGTAAAAGCAAGAAACGCTTTGCTCGATAGTGATTTGACGGCAAAAGTCGGAGATTTTGGGCCAGCTAAGCTCTACAAACAAGGAGCAAATCTGAGAATGACGAGGGTCGTCAGAACTTTAGGGTATCTAGCTCCGGAGCTACCGAGAACGTGTAAAGCCACCACCAGCACAAATGTATTCGCGTTCGGAGCTCTTTTGATCAAAGTTGCGACAGGAAGAAGACCCATTGAGCAAAAAGCTAAGCCGGAAGAGGTTGTTTTGATCGATGCGGTGTGGGATAAGTACAAGGAGGGAGCTATTTTTGATGTGGTTGATCGAATACTGAACGGCGACTACGACGAGGTTGGAATGGCTGTGGTTTTGAAGCTGGGGTTGCTGTGTTCAAACAGCTCTCCGTGGATCGGCCGACCATGA 561 46.35 MANGSLDQILFDDSKMILNWEQRFKIIKDVASRLLYLHEGFDQVVIHIDVKARNALLDSDLTAKVGDFGPAKLYKQGANLRMTRVVRTLGYLAPELPRTCKATTSTNVFAFGALLIKVATGRRPIEQKAKPEEVVLIDAVWDKYKEGAIFDVVDRILNGDYDEVGMAVVLKLGLLCSNSSPWIGRP 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21568192 21568752 + BLOR04440 Blo12g00421 67682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00421 186 Gene3D Transferase(Phosphotransferase) domain 1 1 183 - -
Blo12g00421 186 SUPERFAMILY Protein kinase-like (PK-like) 1 164 IPR011009 -
Blo12g00421 186 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00421 186 PANTHER - 1 182 - -
Blo12g00421 186 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 1 182 - -
Blo12g00421 186 Pfam Protein kinase domain 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01103 Blo12g00421 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00421 Blo-Chr12:21568192 Blo12g00423 Blo-Chr12:21610255 2.75E-105 dispersed
Blo12g00417 Blo-Chr12:21420963 Blo12g00421 Blo-Chr12:21568192 3.73E-108 proximal
Blo12g00421 Blo-Chr12:21568192 Blo12g00422 Blo-Chr12:21588927 4.28E-103 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84575 PF00069 Pkinase 2.70E-21 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00421 - - hbr:110647823 261.536