Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00428 ATGGGAAATCGTATCGGGAGAATTGGCCACTGTTTCGCCGAAGACGGAGATATTTCCAGGCGATATGAAGTCGGAAGCTCTGTGTTCTTACCGGACCCGCTCGACGAGGGTTACGGTCATTCTTTCTGCTACATACGACCCGAACCGGATCGTGTATCGTCTTCCCACAAAGTTTTCTCCGAGGATGACATACCTCCAATGACGACGTTCAGATCAATCTCTGGCGCCTCTGTTAGCGCCAACAACTCGACACCCCTTTCCACCTCCCTCGCCGATCTTTATCCCTACAGTACGACGTTCGATCGGGCTGCTGCTTTCGACTGTTCGAATTCCTTCGCTTCCATCCCTCTCCAACCAGTTCCTCGCTATTCAATTTCCGGCAATTCCGGCGGAGTTCTGGGTTCGGGTCCGATCGAGAGAGTGTTTCTTTCGGGTCCTATGGAACGAAGCCTTACTTCCGGGCCCCTCGATCGCGGGTTAAATTCGGGTTTGATTGCAAAGGGGCTCGATAAACTAGAAAGGAGTTTCTCTCATAATGGATTCGGAGCGAAACCCAGATTAAAGAAGCGCAGTTTAATTCGAATTTTGAAGAGAGCTTTATCAAAAACAATATCTCGGGGCGGCCCAAAACCTCCAATCCTGCCGACGACAGAAATCGGTTCAGCTAAAGAATCAGATTCATACAAGGACAACGAAAATTTTGTTGCTCAAAATACTACCAATATGAGAAGCCATGTGAGCTTAATGGATGTCGATGAAGAGGGCGATTACTTAATGGGCTGTAAAACGCTTCAGTGGGCGCAAGGAAAAGCCGGCGAGGATCGAGTTCACGTCGTGATTTCTGAAGAGAACGGCTGGGTTTTTGTCGGGATTTATGACGGATTTAATGGTCCAGATGCTCCTGATTATTTACTCGCTAATCTCTATACTTCAGTTCGCAAGGAACTCAAGAGATTGCTCTGGAATGATAAGAATGAATCCACAGATACTTCATCGACATCGATGAATTCGTCAAATTCAAATTCAAATTCAAATTCAGTTGAAGAGAATTATACGCCCCAATCGAGTAATGGCAATCCGGATTCGGAAATCGATTCAAACAGGAAAACCAGCGGAATTACGAAGAGGAATCAAATTAATGGAGTGGAGGAGAAAGGCGAGGGCAATCCAAAAGTTTGTAAGTGTGAATGGGAAAGGGAAAGATTGGAGCACGAGAAACGATCAATGTGGGACGAATCATCGGCCATTAGTAAATCTGAAGTTCTGAATGCTCTGTCTCAGGCATTGAGGAAGACGGAGGATGAGTATTTAGAGATTGCAGATGAGAAAGTAACGGTTCTTCCAGAGCTAGCTTTGATGGGGTCATGTGTTTTAGTCATGTTGATGAAGGGAGAAGAAGTTTACGTGATGAACGTTGGAGATAGCCGAGCGGTTCTAGCTCAGCAACTAGAACCCGATTTCTCAGTTGGAAATCCTTACAGAGATTTCGAACGGATCAACGAGGGAACTCAACGATCGATCGAATCACTCGAATCGTGTGGCTTGACTGCGATTCAGCTCACAATGGATCACAGCACAGACGTTGACGAAGAAGTGAAGCGGATAAAGAAGGAACACCCGGATGATGCTGATGCAGTAATGAACGGCAGAGTAAAAGGGTATTTGAAGATCACAAGAGCATTCGGAGCCGGGTTTCTCAAACAGCCAAAGTGGAACGATGCACTTTTGGAGATGTTCAGAATAGACTACATCGGAAACTCCCCTTACATAACTTGTAATCCATCGCTCTATCACTACAAACTGAAGCCAAGAGACAGATTCATAATACTATCCTCCGATGGACTCTTCCAATACTTCACCAACGAACAAGCCATCGCCGAGGTCGAGGCCTTCCTCACCGCATTTCCCGAAGGAGATCCGGCTCAGCACCTCATCGAAGCCGTCTTGTTCAGAGCTGCTCGAAAAGCTGGTATGGACTTCCATGAACTGCTTGAAATCCCACAAGGCGAGAGGAGGAAATACCACGACGATGTTTCTGTCATCATCATATCTTTGGAGGGAAGAGTATGGCGGTCACTACTGTAA 2085 46.47 MGNRIGRIGHCFAEDGDISRRYEVGSSVFLPDPLDEGYGHSFCYIRPEPDRVSSSHKVFSEDDIPPMTTFRSISGASVSANNSTPLSTSLADLYPYSTTFDRAAAFDCSNSFASIPLQPVPRYSISGNSGGVLGSGPIERVFLSGPMERSLTSGPLDRGLNSGLIAKGLDKLERSFSHNGFGAKPRLKKRSLIRILKRALSKTISRGGPKPPILPTTEIGSAKESDSYKDNENFVAQNTTNMRSHVSLMDVDEEGDYLMGCKTLQWAQGKAGEDRVHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYTSVRKELKRLLWNDKNESTDTSSTSMNSSNSNSNSNSVEENYTPQSSNGNPDSEIDSNRKTSGITKRNQINGVEEKGEGNPKVCKCEWERERLEHEKRSMWDESSAISKSEVLNALSQALRKTEDEYLEIADEKVTVLPELALMGSCVLVMLMKGEEVYVMNVGDSRAVLAQQLEPDFSVGNPYRDFERINEGTQRSIESLESCGLTAIQLTMDHSTDVDEEVKRIKKEHPDDADAVMNGRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYIGNSPYITCNPSLYHYKLKPRDRFIILSSDGLFQYFTNEQAIAEVEAFLTAFPEGDPAQHLIEAVLFRAARKAGMDFHELLEIPQGERRKYHDDVSVIIISLEGRVWRSLL 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 21779449 21781879 + BLOR04447 Blo12g00428 67689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00428 694 MobiDBLite consensus disorder prediction 325 390 - -
Blo12g00428 694 CDD PP2Cc 399 685 IPR001932 -
Blo12g00428 694 SUPERFAMILY PP2C-like 269 686 IPR036457 -
Blo12g00428 694 MobiDBLite consensus disorder prediction 325 378 - -
Blo12g00428 694 MobiDBLite consensus disorder prediction 206 226 - -
Blo12g00428 694 Coils Coil 422 442 - -
Blo12g00428 694 Pfam Protein phosphatase 2C 420 633 IPR001932 -
Blo12g00428 694 Gene3D - 231 690 IPR036457 -
Blo12g00428 694 ProSiteProfiles PPM-type phosphatase domain profile. 258 685 IPR001932 -
Blo12g00428 694 SMART PP2C_4 257 683 IPR001932 -
Blo12g00428 694 PANTHER PROTEIN PHOSPHATASE 2C 17 692 IPR015655 GO:0004722|GO:0006470
Blo12g00428 694 PANTHER PHOSPHATASE 2C, PUTATIVE-RELATED 17 692 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00508 Blo-Chr2:8020658 Blo12g00428 Blo-Chr12:21779449 3.57E-81 dispersed
Blo12g00428 Blo-Chr12:21779449 Blo13g00497 Blo-Chr13:26208463 3.50E-37 dispersed
Blo12g00428 Blo-Chr12:21779449 Blo13g01076 Blo-Chr13:32921604 0 wgd
Blo12g00428 Blo-Chr12:21779449 Blo14g00118 Blo-Chr14:854121 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00428 - - bhj:120069881 853.588