Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00457 ATGGAGAGTCGTGACCCAAAGGCTGCTGAAATTTTGGATTCAACGCTGAATGATAATCAAGCATGCAGTTCAGTTGAGTTCAAGCCAAGTTCATCAAATTCATCTATACAAACACATCTGGCTTCAACAAATTCTCATCCTGAAACCCGTGATCATGATGTGGAAACTTCATCCTCTGCTTCAGCATCTAGTCGGTCAGATATAGATACTGAGAAAGATTCTTATGGGTCATGTGACTCTGATGATGCAGAGCAAAGGCAAAACCATTACAAAATTTATCAGAGTGGAAGTTGGGCTGGTGATCATGGAAGGATGATGAGGATTGTGATGCAATTGAGTGACGAAACAGACCCTTCAGGGCAATTATCTTTGCTCACTGAGCTATGTGAGGTTCTGTCATTTTGCACAGAAAATTCACTTCCCAGCACTACGTCGGAGTTATCAGCTCAGCTACTTGTAAAACTTGCAAACCATGATGATAATCCTAACATTATGTTGTTTGCTATAAGGGCTATTACTTATCTATGTGATGTGCATCCTCAGTCCTCCGAGTTTCTTGTTCAACATCAAGCCGTTGAGGTTCTTTGCCAAAGGTTAATGGCTATTGAGTACTTGGATGTCGCTGAGCAGTGTCTCCAAGCACTGGATAAAATATCACGGGAACAACCTCTTGTGTGCTTACATGGTAGAGCGACCATGGCTGTTCTAAAATATATAAATTTCTTTTCAACGAGTGTACAAAGAGTTGCTCTTTCCACTGTGATGAATATGTGTAAAAAATTCCCTTCTGAATGTCCTTCATCTTTCATGGAAGCCATTCCCTTATTGTGCAATCTTCTCAAGTATGAGGATGAACAGATTGTTGAAGATGTAGCTGTCTGCATAATAAAGATTTCTAAGCGAGTTAGTAAGTCCTCTGCTATACTGGAAGAATTTTGTAGACATGAGCTGATTCATGAAGTCACACGTCTATTGAACTTGAATAGCCGAAGTACTTTGTCCCAACCAGTATATACTGATTTGATTAGACTTCTTGCAGAACTTTCTTCCCGTTCAATGTTTTCTTTTACAACTCTTTATAAGCTGAACATAAGCAATGTACTTAAGGAGATGCTATCTACTTTTATTCGCTCCCAAGGAATGTATTCTTTGCACACTGTTGACGGACAATACAATCAGGCATGTGAACTTCTAAAATTTCTTCATGAGCTTCTCCCTACATTTCTTGGAGATGAAAAGGTTCAACTAGCATCAGAGAAAGAATCTTATTTGATAAATCATCCTGATGTTTTCCAAAATTTTGGAACGGATATATTGCCCTTGATGATTCAGGTGGTCAATTCTGGTGCAAGTATTTCTGTTTGCTATGGATGCCTAATCGTTGTTTACAACCTAGTCTATTTGAGCAAATCAGAAGTGCTTGCTGTACTGCTTAAGGATGCTAAAATTGCTAGTTTCCTGGCTGGAGTGTTCACTCGTAAAGACCATCATGTGCTAATATTATCCATGAAAATCGCTGACATGCTTCTGCAAAAGCTTCCTGATATTTTTATGAACTCATTTATCAAAGAAGGTGTATTCTTTGCAATCGAAGTGCTCAAAAATGACTCTGTTCGTGATCTTGCGGAGAAAATAAGAAGTAATTATTTTGCATCTGATATATATGATTTGGCTGGAGGAGTGACTGACATTCTCCAAATGCTCCAAACATCATCCGTTGCACTAGACGAATTATCAAACGATGTGTCAAATCAAAAGGAAGATAAAGTGCATCATATATTGCTTGAACTTGTATCTAAGCTTAAGGGCAGTGAATTCATATCGACTTTTGAATTTATAGAAAGTGGAATTGTAAAAGCATTGATGAACTGCCTGTCCAATGGTCAGTATATGATGAAAAACCAACAACTGAATGATGTTTATGGGCACTATTTTGTAGTGGAAAAAAGATTTGAGGTATTTGCTAAGTTGTTTCTGTCTTATTCTGATCCAACTTCTGGGGAGTTGCTGTTATCATTATTGTTAAGGAAATTACAGAATATCTTATCATCTTTGGAAAAATTTCCTGTTGTCCTGAACCAAGGTCAAGGACTTAAACAAAGAAACTGCTTTGCTGCTGTTCCAAATGGACGTCGAATTTCATATCCATGTCTACGAGTTCGTTTTGTGAAAGGAGATGGAGAACCATACCTTTGTGACTACTCAGAAGACGTTCTAACTGTTGACCCTTTATCTTCTTTGGATGCCATTATAGAGTTTTTGTGGCCTAAAGTTAGCACAAAACGAACCAAGCACATCAGATCATCTTCGACATCTGAAGCAAGGGACCAAACAGAAAATCAACCTCTTAAGTTATCGCCAATGGTAAGTCCTGATTCTGTGAAGGAAGATGAGAAGAACTTGCCCCGGTCTTCATCTGATGAACCAGTGAATTTGACTCCTTCAAGTACGAGTGAAAGAACACATTTGGATTGCGTTTTGCCTCAGATTTCTCCAGAGTCAAATAACAGTTTGCAATCTGAGCATCCCTCAGCTTGTAGCAATGATGATGCTTCTCCAAGACTGTTACTTTACCTTGACGGGCAGCGGTTGGACAGCTCATTGACTTTTTACCAAGCAATTCTTAAACAACAAATAAAGGAAGATGAAATATTCAACTGTACAAAATTGTTGGATCAAGTATACACATTAACGTATAGAAGAGACCAGGATTCAAGAGACATTTGTTCTCCAGCATGTTGCCCTGTGTCTGTACCAGAATCAAATTCAGCATACATGCAATGTGCTTCAGCTTTTTCTAACATCTTCGATTCTGATCTTACTTCTGACTTAGAAAAGCATAGTCCTACTTATGATGTTCTATTTCTGCTTAAAAGCTTGGAAGGGATGAACAGATTAACTTTTCATCTTCTGTCACATCAGAGGATACATGCTTTTGCTGAAGGGAGAAGTGATAGCTTTGATGACATGGAAATTTCAGTTCCTTCAGTATCACAGAATGAGTTTATAAGCAGTAAATTGACAGAAAAGTTAGAGCAACAGATGGGTGACTCTTTGGCGATGTCTACTTTGGGCATGCCTTTATGGTGTAATCAACTGATGGTTTCATGTCCATTTTTATTCAGTTTCGAGGCAAGACGTAAATACTTTCATTTGTCAGCATTTGGTCCACTCCAAGTTCTTAATCACACACGTTCTAACAGTAGCTCAGGGACCCCCGGCGACAGGCGAATGAGCTCAGGTAGCTTCCCTCGTAAGAAAGTTTTAGTATTCCGCAACCGTATTTTGGACTCTGCTGCTGAAATGATGGAGAAGCATGTTCAACATAAAGTTCTCCTTGAAGTTGAATTTAATGATGAAGTTGGCAGTGGACTTGGTCCAACACTGGAGTTTTATACTCTTATTAGTCGAGAGTTTCAAAAATCTGCCCTAGGAATGTGGAGAGAGGATCTTAGTTCATTTAGCCCTCGACAAGGCTTGGAGGCTGAGAATGATGAAATTTCAAGGTTTCCTTTCGGTCTTTTCCCACGGCCATGGTCATCAACTTTACATGCATCAGTTGGATTGGAGTTCAGTGAGGTGACCAAAAAGTTTGTCCTCTTAGGCCAAGTTGTAGCAAGAGGTATTCAAGATGGACGGGTTTTGGATCTTTGCTTCTCCAAAGCCTTCTATAAACTTATTCTGGGGCAGGAGATTAATCTCTTTGACATCCAGTCATTTGATCCGGAGCTTGGTAGAACATTGCTCGAGTTTCAGGCTCTTGTCGAGAGGAAAAAGTTTTTGGAGTCTTCTTGTGGAGAAAATTTATCTAATTTGGACCTAAGTTATCGAAATACCAACATAGAGGATCTTTGCATAGATTTTACTCTTCCTGGTTATCCAGAATACATTCTGACTTCCGGGCCTGATCATGCATTGGTAAATATGGACACCTTGGAGGATTATATTTCCCTAACAGTGGATGCTACTATAAATACTGGAATTGCGAGACAAGTGGAAGCATTTAAATCTGGGTTTAATAAGATTTTTCCCATTGAGCATCTTCGAGCTTTTACTGCTGAAGAACTCGAGCGATTATTATGCGGAGAACAAGACTCTTGGACTCATTCTATTGATCTTCTAGATCATATCAAGTTTGATCATGGATACACTGCCAGCAGTCTTCCCATCATTAATTTACTGGAAATCATTCGAGAGTTCAACAATGAACGACAACGATCATTTCTTCAGTTTGTGACGGGTGCACCTAGGCTTCCTCTTGGAGGTTTGGCATCTCTGAATCCAAAGCTAACCATTGTTCGGAAGCTTTCGAGCAACCAGCCAGATTCAGATTTACCCAGTGTAATGACTTGTGCAAATTACCTCAAGCTTCCACCTTATTCTTCAAAAGAGAGGATGAAAGAGAAGATCTTGTATGCCATTGAAGAAGGACAAGGATCATTTCATCTTTCTTAG 4455 39.28 MESRDPKAAEILDSTLNDNQACSSVEFKPSSSNSSIQTHLASTNSHPETRDHDVETSSSASASSRSDIDTEKDSYGSCDSDDAEQRQNHYKIYQSGSWAGDHGRMMRIVMQLSDETDPSGQLSLLTELCEVLSFCTENSLPSTTSELSAQLLVKLANHDDNPNIMLFAIRAITYLCDVHPQSSEFLVQHQAVEVLCQRLMAIEYLDVAEQCLQALDKISREQPLVCLHGRATMAVLKYINFFSTSVQRVALSTVMNMCKKFPSECPSSFMEAIPLLCNLLKYEDEQIVEDVAVCIIKISKRVSKSSAILEEFCRHELIHEVTRLLNLNSRSTLSQPVYTDLIRLLAELSSRSMFSFTTLYKLNISNVLKEMLSTFIRSQGMYSLHTVDGQYNQACELLKFLHELLPTFLGDEKVQLASEKESYLINHPDVFQNFGTDILPLMIQVVNSGASISVCYGCLIVVYNLVYLSKSEVLAVLLKDAKIASFLAGVFTRKDHHVLILSMKIADMLLQKLPDIFMNSFIKEGVFFAIEVLKNDSVRDLAEKIRSNYFASDIYDLAGGVTDILQMLQTSSVALDELSNDVSNQKEDKVHHILLELVSKLKGSEFISTFEFIESGIVKALMNCLSNGQYMMKNQQLNDVYGHYFVVEKRFEVFAKLFLSYSDPTSGELLLSLLLRKLQNILSSLEKFPVVLNQGQGLKQRNCFAAVPNGRRISYPCLRVRFVKGDGEPYLCDYSEDVLTVDPLSSLDAIIEFLWPKVSTKRTKHIRSSSTSEARDQTENQPLKLSPMVSPDSVKEDEKNLPRSSSDEPVNLTPSSTSERTHLDCVLPQISPESNNSLQSEHPSACSNDDASPRLLLYLDGQRLDSSLTFYQAILKQQIKEDEIFNCTKLLDQVYTLTYRRDQDSRDICSPACCPVSVPESNSAYMQCASAFSNIFDSDLTSDLEKHSPTYDVLFLLKSLEGMNRLTFHLLSHQRIHAFAEGRSDSFDDMEISVPSVSQNEFISSKLTEKLEQQMGDSLAMSTLGMPLWCNQLMVSCPFLFSFEARRKYFHLSAFGPLQVLNHTRSNSSSGTPGDRRMSSGSFPRKKVLVFRNRILDSAAEMMEKHVQHKVLLEVEFNDEVGSGLGPTLEFYTLISREFQKSALGMWREDLSSFSPRQGLEAENDEISRFPFGLFPRPWSSTLHASVGLEFSEVTKKFVLLGQVVARGIQDGRVLDLCFSKAFYKLILGQEINLFDIQSFDPELGRTLLEFQALVERKKFLESSCGENLSNLDLSYRNTNIEDLCIDFTLPGYPEYILTSGPDHALVNMDTLEDYISLTVDATINTGIARQVEAFKSGFNKIFPIEHLRAFTAEELERLLCGEQDSWTHSIDLLDHIKFDHGYTASSLPIINLLEIIREFNNERQRSFLQFVTGAPRLPLGGLASLNPKLTIVRKLSSNQPDSDLPSVMTCANYLKLPPYSSKERMKEKILYAIEEGQGSFHLS 1484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22133149 22140038 + BLOR04476 Blo12g00457 67718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00457 1484 ProSiteProfiles HECT domain profile. 1099 1484 IPR000569 GO:0004842
Blo12g00457 1484 MobiDBLite consensus disorder prediction 773 787 - -
Blo12g00457 1484 MobiDBLite consensus disorder prediction 66 83 - -
Blo12g00457 1484 CDD HECTc 1087 1482 IPR000569 GO:0004842
Blo12g00457 1484 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL4 1 533 - -
Blo12g00457 1484 Pfam HECT-domain (ubiquitin-transferase) 1133 1484 IPR000569 GO:0004842
Blo12g00457 1484 MobiDBLite consensus disorder prediction 805 822 - -
Blo12g00457 1484 Gene3D Hect, E3 ligase catalytic domains 1030 1261 - -
Blo12g00457 1484 MobiDBLite consensus disorder prediction 1 83 - -
Blo12g00457 1484 SUPERFAMILY Hect, E3 ligase catalytic domain 1082 1477 IPR035983 GO:0004842
Blo12g00457 1484 SUPERFAMILY ARM repeat 111 549 IPR016024 -
Blo12g00457 1484 Gene3D Hect, E3 ligase catalytic domain 1370 1481 - -
Blo12g00457 1484 MobiDBLite consensus disorder prediction 765 822 - -
Blo12g00457 1484 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL4 533 1484 - -
Blo12g00457 1484 MobiDBLite consensus disorder prediction 13 44 - -
Blo12g00457 1484 Gene3D - 102 551 IPR011989 -
Blo12g00457 1484 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 1 533 IPR045322 GO:0006511|GO:0061630
Blo12g00457 1484 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 533 1484 IPR045322 GO:0006511|GO:0061630
Blo12g00457 1484 SMART hect_3 1096 1484 IPR000569 GO:0004842
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo09g00525 Blo12g00457 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00457 Blo-Chr12:22133149 Blo13g00505 Blo-Chr13:26382024 1.17E-20 dispersed
Blo12g00457 Blo-Chr12:22133149 Blo04g00566 Blo-Chr4:4867342 9.14E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00457 K10590 - qsu:112028328 1719.52