Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00467 ATGAAGGTTCTGGCGCCACTTCCGATTGGTTTTGCGGTGTTTATGGTTCATCTAGCGACCATTCCGATAACCGGCACTGGAATAAACCCAGCTCGAAGCTTTGGAGCTGCTGTGATTTACAACAAAGATAAAGCCTGGGATGATCAATGGATGTTCTGGCTAGGGCCATTCGTGGGAGCCGCCATTGCTACATTTTATCACCAGCACATTCTGCGAGCCGGCGCAGTGAAAGCGTTGGGGTCTTTCAGGAGCTCCTACTAA 261 50.19 MKVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKDKAWDDQWMFWLGPFVGAAIATFYHQHILRAGAVKALGSFRSSY 86
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22213450 22213793 - BLOR04486 Blo12g00467 67728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00467 86 Gene3D Glycerol uptake facilitator protein. 1 86 IPR023271 -
Blo12g00467 86 Pfam Major intrinsic protein 4 67 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00467 86 PRINTS Major intrinsic protein family signature 10 32 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00467 86 PRINTS Major intrinsic protein family signature 50 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00467 86 SUPERFAMILY Aquaporin-like 3 72 IPR023271 -
Blo12g00467 86 PANTHER PLASMA MEMBRANE INTRINSIC PROTEIN 2,4-RELATED 1 84 - -
Blo12g00467 86 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 84 IPR034294 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00467 Blo-Chr12:22213450 Blo04g00573 Blo-Chr4:4927713 9.19E-46 dispersed
Blo01g01165 Blo-Chr1:42789605 Blo12g00467 Blo-Chr12:22213450 7.99E-53 wgd
Blo12g00467 Blo-Chr12:22213450 Blo13g00923 Blo-Chr13:31718196 1.31E-45 wgd
Blo12g00467 Blo-Chr12:22213450 Blo13g01118 Blo-Chr13:33303294 9.30E-48 wgd
Blo12g00467 Blo-Chr12:22213450 Blo14g00177 Blo-Chr14:1386783 1.68E-48 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00467 K09872 - egr:104432876 167.162