Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00468 ATGGCAGGTGGCTTCTCAGGCAAGGACTACCACGAGCCCCCGCCGACGCCACTGATAGACTCCGAAGAGCTCATTCGCTGGTCTTTATACAGAGCTGTAATCGCCGAATTCTTCGCCACTCTTTTGTTCCTTTACGTCACTGTAATGACGGTGATAGGATATAGTAGACAGACTGATAAAGCTCACGGCGGAGAAGATTGTGGCGGCGTTGGAATTCTGGGAATTGCCTGGGCCTTCGGCGGAATGATCTTCGTCCTCGTTTACTGCACCGCCGGAATCTCTGGCGGCCATATTAATCCCGCGGTCACTTTCGGCCTGTTTCTTGCTCGTAAGGTCACGTTAGTTCGAGCTATTCTGTATATGGTTGCACAGTGCTTAGGAGCCATTTGTGGTTGTGGGCTCGTGAGGGCGTTTCAGAATTCTTACTATGACAACTACCACGGCGGAGCTAACATGCTCTCCGCCGGTTACAACAAAGGCACTGGATTAGCCGCTGAAATCATCGGAACCTTCGTCCTTGTTTACACAGTTTTCTCTGCAACAGACCCGAAGAGAAATGCCAGAGATTCTCACGTTCCAGTTAGTAATCTCCTATCAAATTCCTAA 606 50.0 MAGGFSGKDYHEPPPTPLIDSEELIRWSLYRAVIAEFFATLLFLYVTVMTVIGYSRQTDKAHGGEDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVTLVRAILYMVAQCLGAICGCGLVRAFQNSYYDNYHGGANMLSAGYNKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVSNLLSNS 201
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22213838 22214443 - BLOR04487 Blo12g00468 67729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00468 201 ProSitePatterns MIP family signature. 97 105 IPR022357 -
Blo12g00468 201 PANTHER AQUAPORIN PIP2-4-RELATED 5 195 - -
Blo12g00468 201 Pfam Major intrinsic protein 25 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00468 201 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 5 195 IPR034294 -
Blo12g00468 201 SUPERFAMILY Aquaporin-like 23 193 IPR023271 -
Blo12g00468 201 Gene3D Glycerol uptake facilitator protein. 16 199 IPR023271 -
Blo12g00468 201 PRINTS Major intrinsic protein family signature 79 103 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00468 201 PRINTS Major intrinsic protein family signature 116 135 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00468 201 PRINTS Major intrinsic protein family signature 31 50 IPR000425 GO:0015267|GO:0016020|GO:0055085
Blo12g00468 201 PRINTS Major intrinsic protein family signature 165 183 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00468 Blo-Chr12:22213838 Blo13g01118 Blo-Chr13:33303294 1.11E-106 dispersed
Blo12g00468 Blo-Chr12:22213838 Blo13g00923 Blo-Chr13:31718196 1.24E-107 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00468 K09872 - jre:109020874 347.436