Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00469 ATGATTACATTTATGGAATCGACAGAGATGACAAAGGACACCGAAAAATGCTTAGATCCTCAACTATGGCACGCCTGTGCCGGAGGAATGGTTCAAATGCCACCATTAGACACCAAGGTGTTCTACTTTCCTCAGGGCCATGCAGAGCATGCCAGTGGGCCTGTTGATTTCCGTAATTCCCCAAGACTTCCACCGTTAATTGCTTGTAGAGTTTCGGCCATTAAATTCATGGCTGATCTGGAAACTGATGAGGTTTATTCCAAAATCAAATTGGTTCCTCTAAACAGGAGTGAGCTTGATTTTGAGGAAGATAGAATTTGTGGGCTTAATGTGGCTGAAGTTCAGGTTAAACCCGCATCGTTTGCAAAGACTTTGACTCAATCTGATGCAAATAATGGTGGAGGATTCTCTGTTCCAAGGTATTGTGCGGAGACGATATTTCCCGGATTGGATTACAATATGGACCCACCTGTTCAGAACATTCTTGCTAAGGATGTTCATGGGGAGACATGGAAATTCCGGCACATTTATAGGGGGACACCTAGAAGACATCTCTTGACGACTGGCTGGAGTACCTTTGTGAATCATAAGAAGCTCGTTGCTGGTGATTCTATTGTTTTCCTAAGAGCGGAAAATGGAGATTTATGCGTCGGAATTCGAAGGGCAAAGAGGGGAATAGGAGGTGGGCCAGAATTGTCATCTGGGTGGAATCTGTTAGGGGAATATGGTGGATATTCCGGCTATTTGAGAGAAGAAGAAGGCACGCTATTAAAGAAGACTAATGGTTTGAGCTCTGATGGGAGTTCATCAGCCGGAAATGGTAAAGTTAGACCGGAATTGGTCATCGAGGCTGCAATGCTTGCGGCTAATAAACAGCCATTTGAAGTCATATATTACCCTCGAGCTAGCATGCCTGAATTCTGTGTGAAGGCCTCTTCTGTGAAAGCGGCAATGCTGATCCGATGGAGCCCTGGATTGAGGTTTAAAATGGCCTTTGAAACCGAGGACTCGTCAAGAATAAGCTGGTTCATGGGAACTATTTCTTCTGTTCAAGTTGCTGATCCAATTCGCTGGCCGGAGTCTCCTTGGCGTCTTCTGCAGGTTACATGGGATGAGCCGGATTTACTACAGAACGTAAAATGTGTTAGCCCATGGCTGGTGGAGTTGGTATCAAGCATGTCAGCAATCAACCTCTCCCCTTTCCCACCTCCGAGGAAAAAGCCGAGATTGCCACCTCACCCCGAATTCCTGTTCGATGCCACCCAGTTTCTGGTCACAACACCTTTTTCCAATAACAATCACTCCGGGCCAAGTTTCCCCTTCGATTGTCTACCCGACAAAACTTCCCCTGCTGGCATGCAGGGAGCCAGGCATGCTCTTTACAATCAATCCTTCTTGGACCACCGTTTCGATAAACTTCACTCCTCCCATTTCCCCATTGGTTATACTACACCATTCGATCCCACTTCTGCTCTCCCTACTAGTACAATGATTCAAAAGCCTAGTATGACTAGTGATGAAGTCGCAGGCTTGTTGACAATGGGGCCTCTGAAAAAATCCGATGACTCGAAGCCACCCCAACTTGTGCTTTTTGGTCAAAGAATACTGACCGAACAGCAACTGTCGCAGAGCTCTGGCGAATCTGTCTCCCTAGGTATTACCGGAAATAGTTCGTCAGATGGTAATGTAGATAAAGTGGGGAATTTGTCTCATGAGTCTGTTCCGGCCCTTTTCAATGAGGAAACGGGTCATTGTAAAGTCTTCATGGAATCTGAAGATGTAGGCCGTACAATCGATCTCTCGTTGCTTGGGTCGTATGACAAACTTTGTAGAAAATTGGCTGATTGGTTTGGCATAGAAAACTCAGACATGTTAAACCATGTGCTCTATACAGACAGTTCTGGCGCAGTCAAACACATTGGCGACGAGCCATTCAGTGAGTTCATGAAATCAGCGAGGCGGGTGATGATTTTGACGGATTCAGCAAGTGCAAGTGCAAGTGCAAGTGCAAGTGCAGGTTTATAG 2025 45.98 MITFMESTEMTKDTEKCLDPQLWHACAGGMVQMPPLDTKVFYFPQGHAEHASGPVDFRNSPRLPPLIACRVSAIKFMADLETDEVYSKIKLVPLNRSELDFEEDRICGLNVAEVQVKPASFAKTLTQSDANNGGGFSVPRYCAETIFPGLDYNMDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGPELSSGWNLLGEYGGYSGYLREEEGTLLKKTNGLSSDGSSSAGNGKVRPELVIEAAMLAANKQPFEVIYYPRASMPEFCVKASSVKAAMLIRWSPGLRFKMAFETEDSSRISWFMGTISSVQVADPIRWPESPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSMSAINLSPFPPPRKKPRLPPHPEFLFDATQFLVTTPFSNNNHSGPSFPFDCLPDKTSPAGMQGARHALYNQSFLDHRFDKLHSSHFPIGYTTPFDPTSALPTSTMIQKPSMTSDEVAGLLTMGPLKKSDDSKPPQLVLFGQRILTEQQLSQSSGESVSLGITGNSSSDGNVDKVGNLSHESVPALFNEETGHCKVFMESEDVGRTIDLSLLGSYDKLCRKLADWFGIENSDMLNHVLYTDSSGAVKHIGDEPFSEFMKSARRVMILTDSASASASASASAGL 674
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22231390 22233997 - BLOR04488 Blo12g00469 67730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00469 674 Gene3D - 321 396 - -
Blo12g00469 674 Pfam B3 DNA binding domain 121 222 IPR003340 GO:0003677
Blo12g00469 674 SUPERFAMILY DNA-binding pseudobarrel domain 119 224 IPR015300 -
Blo12g00469 674 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Blo12g00469 674 Gene3D - 119 223 IPR015300 -
Blo12g00469 674 CDD B3_DNA 120 221 IPR003340 GO:0003677
Blo12g00469 674 ProSiteProfiles PB1 domain profile. 582 662 IPR000270 GO:0005515
Blo12g00469 674 Pfam Auxin response factor 284 367 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Blo12g00469 674 Gene3D - 579 665 - -
Blo12g00469 674 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 7 658 IPR044835 GO:0003677|GO:0006355|GO:0009725
Blo12g00469 674 PANTHER AUXIN RESPONSE FACTOR 7 658 - -
Blo12g00469 674 SMART B3_2 121 223 IPR003340 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01167 Blo12g00469 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00469 Blo-Chr12:22231390 Blo18g00211 Blo-Chr18:2065513 2.64E-107 dispersed
Blo01g01167 Blo-Chr1:42834256 Blo12g00469 Blo-Chr12:22231390 0 wgd
Blo12g00469 Blo-Chr12:22231390 Blo13g00924 Blo-Chr13:31721951 7.32E-176 wgd
Blo12g00469 Blo-Chr12:22231390 Blo14g00180 Blo-Chr14:1411907 0 wgd
Blo12g00469 Blo-Chr12:22231390 Blo04g00070 Blo-Chr4:598266 4.07E-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13001 PF02362 B3 5.90E-21 CL0405 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00469 - - fve:101313821 903.279