Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00472 ATGGAGAACGTTAAGCTCGACGGATATAAGAATGAATCGTCAGAGAACGGCTCATTGGGGAGCCTGTGCAAGAGCCGCGATCCGTTGAACTGGGGGGCTGCTGCGGAGGCGCTCAAAGGGAGCCATTTGGACGAGGTGAAGCGGATGGTGGCTGAGTATCGCCGGCCGGTGATCAATCTCGGAGGGGAAAGTTTGACCATTGCGCAGGTCGCTGCTGTTGCCGGACGGGACTCGGAAGTTTCCGTCGAGCTGTCTGAATCAGCGAGGGCTGGCGTGAAGGCAAGCAGTGACTGGGTGATGGATAGTATGAACAAAGGGACTGATAGCTATGGAGTTACTACTGGGTTTGGGGCAACTTCACACAGAAGAACTAAAGAGGGTGGAGCTCTACAGAAGGAGCTGATCAGATTCCTGAACGCCGGAATTTTCGGAAACGGAACGGAGTCTTGCCACACATTGCCGCACTCCGCCAGCAGAGCCGCGATGCTAGTAAGAATCAACACCCTCCTCCAGGGCTACTCCGGAATCAGATTCGAGATTCTGGAAGCCATAACCAAGCTTCTCAACAGCAATGTTACTCCATGTTTGCCTCTTCGCGGTACAATCACTGCCTCCGGCGACCTCGTACCCCTATCCTATATTGCCGGGTTACTCACCGGAAGACCCAACTCTAAAGCCGTTGGCCCCGACGGAGAGTCGCTGACTGCTACGGAGGCGTTCGAACGTGCCGGAATTACATCCGGGTTTTTCGACCTGCAGCCGAAGGAAGGGCTGGCACTGGTCAACGGCACTGCCGTGGGATCTGGGTTGGCTTCGGTGGTGCTCTTTGAGACTAACATTCTCGCTGTGCTGTCGGAGATCCTCTCTGCCATTTTCGCCGAGGTGATGCAGGGGAAGCCGGAGTTTACAGATCATTTGACCCATAAATTGAAGCACCATCCTGGTCAAATTGAAGCGGCCGCCATAATGGAGCACATTTTGGACGGAAGCTCATACATCAAAGCCGCAAAAAAGCTTCACGAATTGGATCCTCTGCAGAAGCCGAAACAGGATCGCTACGCTCTTCGAACTTCTCCTCAATGGCTCGGCCCTCTAATTGAAGTGATCCGATTCTCAACAAAATCGATTGAAAGAGAAATCAACTCTGTCAACGATAACCCCCTGATCGATGTTTCTCGCAACAAGGCATTACACGGCGGAAACTTCCAAGGAACTCCAATTGGAGTATCCATGGATAATACCCGTTTAGCCATTGCTTCAATCGGGAAGCTGATTTTCGCCCAGTTTTCTGAACTCGTCAATGATTTCTACAACAATGGATTACCCTCGAATCTCTCTGCAGGCAGAAACCCCAGTTTGGATTACGGGTTCAAAGGAGCTGAAATCGCTATGGCTTCGTATTGCTCTGAGCTTCAGTATCTCGCAAATCCAGTAACGAGCCATGTCCAAAGTGCTGAGCAGCATAATCAAGACGTTAACTCTCTCGGCCTAATTTCATCGAGAAAAACAGCCGAAGCTGTCGATATTTTGAAATTAATGTCCTCCACCTTCCTGATCGCTCTTTGCCAAGCGGTCGATTTGAGGCATTTGGAGGAGAACTTGAAGAGCACAGTGAAGAACACAATCAGTCAAGTTGCAAAGAAGGTTCTAACCACCGGCACTAGTGGACAACTCCACCCATCAAGATTTTGCGAGAAAGACTTACTCACAGTCGTCGACAGAGAATACGTTTTCGCCTACATTGACGATCCCTGCAGTGCAAATTACCCATTAATGCAGAAGCTCAGACAAGTCCTCGTCGAGCACGCGCTCACCAACGGAGAAAGCGAGAAGAACGAAAGCACTTCGATCTTCCAAAAGATCGCCTCGTTTGAAGAAGAGTTGCTGGCGATCTTGCCGAAAGAAGTGGAAGGGGCAAGGGTGGCAATCGAAAACGGAAGCGCAGCCATCGGAAACCAGATAAAGAACTGCAGATCGTACCCACTGTATAAGTTCGTGAGGGAAGAGCTGGGAACAGGACTGCTGACAGGGGAGAAAGTGAAGTCTCCGGGCGAAGAATGCGATGTCGTCTTCACGGCGATGTGCGAGGGAAAACTGATCGACCCTATTCTGGCCTGCTTGAGCGACTGGAATGGCGCGCCAATCCCAATCTGCTAG 2157 51.09 MENVKLDGYKNESSENGSLGSLCKSRDPLNWGAAAEALKGSHLDEVKRMVAEYRRPVINLGGESLTIAQVAAVAGRDSEVSVELSESARAGVKASSDWVMDSMNKGTDSYGVTTGFGATSHRRTKEGGALQKELIRFLNAGIFGNGTESCHTLPHSASRAAMLVRINTLLQGYSGIRFEILEAITKLLNSNVTPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPDGESLTATEAFERAGITSGFFDLQPKEGLALVNGTAVGSGLASVVLFETNILAVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHELDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLIALCQAVDLRHLEENLKSTVKNTISQVAKKVLTTGTSGQLHPSRFCEKDLLTVVDREYVFAYIDDPCSANYPLMQKLRQVLVEHALTNGESEKNESTSIFQKIASFEEELLAILPKEVEGARVAIENGSAAIGNQIKNCRSYPLYKFVREELGTGLLTGEKVKSPGEECDVVFTAMCEGKLIDPILACLSDWNGAPIPIC 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22294829 22297418 - BLOR04491 Blo12g00472 67733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00472 718 Gene3D Fumarase/aspartase (Central domain) 265 713 - -
Blo12g00472 718 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 27 707 IPR005922 GO:0005737|GO:0006559|GO:0016841
Blo12g00472 718 PANTHER HISTIDINE AMMONIA-LYASE 23 718 IPR001106 -
Blo12g00472 718 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 23 718 - -
Blo12g00472 718 SUPERFAMILY L-aspartase-like 27 718 IPR008948 GO:0003824
Blo12g00472 718 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 200 216 IPR022313 GO:0016841
Blo12g00472 718 Gene3D - 531 652 IPR023144 -
Blo12g00472 718 CDD PAL-HAL 63 528 IPR001106 -
Blo12g00472 718 MobiDBLite consensus disorder prediction 1 22 - -
Blo12g00472 718 Pfam Aromatic amino acid lyase 65 540 IPR001106 -
Blo12g00472 718 Gene3D - 20 264 IPR024083 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01172 Blo12g00472 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01172 Blo-Chr1:43104660 Blo12g00472 Blo-Chr12:22294829 0 wgd
Blo12g00472 Blo-Chr12:22294829 Blo04g00321 Blo-Chr4:2562592 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00472 K10775 - zju:107433056 1237.25