Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00494 ATGGCAGAAGAGCACCGATGCGAAGCGTCTGAAGGCCACCGTCTCTGCGCTAACAACTGTGGCTTCTTCGGCAGTCCAGCGACGATGGACCTTTGCTCCAAATGCTACAGAGACTACCGTCTTAAAGAGCAACAAGACGCCTCAACCAAATCCACCATCGAAGCTGCTTTCTCAGCCTCCTCATCATCTTCTTCCTCTACTCCGATCGAAACTGTTTTCGATGAATATGTTCCGCCGCCGCCCATAACCCCACCGGAGATAGCCAAAGATTCGAGAATCGCCTCCGTGGTAGGCGACGTTCCGGAGGGGGAGAGGCAGCCGAAGCGGTGCACAGCGTGCAGAAAACGCGTCGGGTTGACCGGCTTCCGGTGCAGGTGTGGCACCACGTTTTGCGGGGTCCACAGGTACCCGGAGAAGCACGGGTGCACGTTCGATTTCAAGAAAGTGGGGAAGGAGGAGATAGCTCGTGCTAATCCCCTCGTGAAAGGCGATAAGTTGACCAAGATTTGA 510 55.49 MAEEHRCEASEGHRLCANNCGFFGSPATMDLCSKCYRDYRLKEQQDASTKSTIEAAFSASSSSSSSTPIETVFDEYVPPPPITPPEIAKDSRIASVVGDVPEGERQPKRCTACRKRVGLTGFRCRCGTTFCGVHRYPEKHGCTFDFKKVGKEEIARANPLVKGDKLTKI 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 22735088 22735597 - BLOR04513 Blo12g00494 67755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00494 169 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 169 - -
Blo12g00494 169 SMART A20_3 13 37 IPR002653 GO:0003677|GO:0008270
Blo12g00494 169 ProSiteProfiles Zinc finger AN1-type profile. 104 150 IPR000058 GO:0008270
Blo12g00494 169 Gene3D - 1 69 - -
Blo12g00494 169 ProSiteProfiles Zinc finger A20-type profile. 10 44 IPR002653 GO:0003677|GO:0008270
Blo12g00494 169 Gene3D - 88 165 IPR035896 -
Blo12g00494 169 Pfam AN1-like Zinc finger 110 146 IPR000058 GO:0008270
Blo12g00494 169 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 15 59 - -
Blo12g00494 169 SUPERFAMILY AN1-like Zinc finger 99 164 IPR035896 -
Blo12g00494 169 Pfam A20-like zinc finger 14 37 IPR002653 GO:0003677|GO:0008270
Blo12g00494 169 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 169 - -
Blo12g00494 169 SMART AN1_Zf_4 110 147 IPR000058 GO:0008270
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo03g01369 Blo-Chr3:40138310 Blo12g00494 Blo-Chr12:22735088 2.46E-44 dispersed
Blo12g00494 Blo-Chr12:22735088 Blo14g00276 Blo-Chr14:2728436 1.38E-44 dispersed
Blo08g00041 Blo-Chr8:347988 Blo12g00494 Blo-Chr12:22735088 5.03E-46 transposed
Blo19g00294 Blo-Chr19:18475417 Blo12g00494 Blo-Chr12:22735088 3.52E-45 transposed
Blo01g01195 Blo-Chr1:44357674 Blo12g00494 Blo-Chr12:22735088 1.43E-75 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00494 - - bhj:120073734 230.72