Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00557 | ATGCAGTCCGATAACTCGGAGCTCTACAGATTGCTCGCCGGAAATGGATTCTTTGACGTCGGACGGAAAAGCTTCTGCAGTTCTTCCTCGTACTACCCTCTCGATCAAATTTCTGGAACGCCAGACACGCTTCCATCTGCGCATGAAAGAGCTCTCGCTGCTCTCAGAAATCATAAGGAAGCTGAGAAGAGGAGGAGAGAGAGAATTAATTCGCACCTCGACAAGCTTCGGAATCTTCTTTCCTGTAATTCCAAAACAGACAAAGCTTCTCTTCTTGCAAAAGTTGTTCAACGCGTGAAAGAACTAAAGCAACAAGCTTCTGAAATCTCTGGAATCGAGACTTTCCCATCAGAAACCGATGAAATCTCTGTGCTATCCGGCGATTTATCCGGCGACGGGAGATTGATTTTCAAAGCCTCTTTGTGCTGCGAAGATCGCTCCGACCTCATACCAGACCTCATCGAAATCCTCCACTCTCTCCACTTGAAGACTCTAACAGCTGAAATGGCGACCCTTGGAGGAAGAACCAGAAACATTCTCGTTGTTGCCCCCGACAAAGATTGCAGCGTTGAATCGGTGCATTTCCTGCAAAACTCATTGAAATCTCTGCTTGAAAGTTCCAATCCTAGCGAAAGATCGAAGAGAAGGCGGATTTCAGATGGCCATGACCGATCTTGA | 678 | 46.9 | MQSDNSELYRLLAGNGFFDVGRKSFCSSSSYYPLDQISGTPDTLPSAHERALAALRNHKEAEKRRRERINSHLDKLRNLLSCNSKTDKASLLAKVVQRVKELKQQASEISGIETFPSETDEISVLSGDLSGDGRLIFKASLCCEDRSDLIPDLIEILHSLHLKTLTAEMATLGGRTRNILVVAPDKDCSVESVHFLQNSLKSLLESSNPSERSKRRRISDGHDRS | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 23600040 | 23601240 | + | BLOR04576 | Blo12g00557 | 67818 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00557 | 225 | Coils | Coil | 59 | 79 | - | - | |
Blo12g00557 | 225 | MobiDBLite | consensus disorder prediction | 206 | 225 | - | - | |
Blo12g00557 | 225 | CDD | bHLH_AtAIG1_like | 49 | 124 | - | - | |
Blo12g00557 | 225 | Pfam | Helix-loop-helix DNA-binding domain | 57 | 102 | IPR011598 | GO:0046983 | |
Blo12g00557 | 225 | SMART | finulus | 59 | 108 | IPR011598 | GO:0046983 | |
Blo12g00557 | 225 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 53 | 102 | IPR011598 | GO:0046983 | |
Blo12g00557 | 225 | PANTHER | TRANSCRIPTION FACTOR BHLH106-RELATED | 4 | 220 | - | - | |
Blo12g00557 | 225 | Gene3D | - | 49 | 111 | IPR036638 | GO:0046983 | |
Blo12g00557 | 225 | PANTHER | TRANSCRIPTION FACTOR BHLH30 | 4 | 220 | IPR045847 | GO:0003700|GO:0006355 | |
Blo12g00557 | 225 | MobiDBLite | consensus disorder prediction | 208 | 225 | - | - | |
Blo12g00557 | 225 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 56 | 111 | IPR036638 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo11g00122 | Blo-Chr11:913347 | Blo12g00557 | Blo-Chr12:23600040 | 1.06E-110 | dispersed | |
Blo12g00557 | Blo-Chr12:23600040 | Blo16g01050 | Blo-Chr16:38996030 | 1.01E-43 | dispersed | |
Blo12g00557 | Blo-Chr12:23600040 | Blo06g00953 | Blo-Chr6:32757026 | 1.37E-47 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13015 | PF00010 | HLH | 1.60E-09 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00557 | - | K22484 | qsu:111998080 | 315.849 |