Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00580 | ATGGCTCACTCCCATCAACACGCGCCCAGCATATTCGAAGTTATGAGTGGCCATTCTCCAGTCTATAACGGCGAGTACCCAGCCTTCTCTACTCCCGGCGATGCTCCCACTCCAAAACCAGTAGTTGGATCTTGTCGGCCAGAGAGCCAGTTCTCATCTACCATTCATAACTCGCGACGTCATTTTCTTTCTGAACATATTAGTTGGCTTGATATCTTCGATTTCTTCTTAGTTTTGTTCTGGATGTCTTTTTTCCCCCTTCAGGCAAAGGCATCAAAGCAGATCGGCGGACGTCAAGTTTGCCAAATCTGCAGCGACTCTGTCGGAAAAACTGTTGATGGGGAGCCGTTTGTTGCGTGCAATGTTTGTAATTTTCCTGTTTGTAGACCCTGCTATGAGTATGAAAGAAAGGATGGAAATAAGTCCTGTCCTCAATGCAAGACTAAATACAAGTGGCTTAAAGGAAGCCCTCTACTTAATGGGGAAGAAGGAGACGATTCTGATGTTAATGGAGGGGCGAATGCTCCCAATTACAATTCTAGTGAGCGAGATATGAAGTATAAGCTACCTGAACGTACGCTTAGTTGGGATACAAACTATGATAAAGAAGGAGCCTTCAATCATATTCCTTTGCTCACCACTGGACGTTCTGTTTCTGGCGACCTATCAGCTGCATCCCCTGAACGCCTTTCAATGGCGTCTCCAGAAAGCTTGAGCAGGACTAATTATAGAGTGATGGACCCTTCGAGAGAGGCTGGGTCGAATGGACTTGGCGGTGTTGCCTGGAAAGAGAGAATTGATGGTTGGAAGATGAAGCAGGAGAAGAGTCATCCTCCAATGAGTAGCCATGCTCCTTCTGAAGGTAGAGGAGGCGCAGACTTTGATGCCAGTACTGATATTGTTATGGATGATTCTTTGCTAAATGATGAAGCGCGCCAGCCTTTATCAAGGAAGGTTTCGGTTCCATCCTCCAGGATCAATCCTTACAGGATGGTTATAGTTCTACGTCTCGCTATTCTTTCCATCTTCCTCCACTACCGTTTGACAAACCCAGTTCCCAATGCATATGCTTTGTGGTTGATATCTGTCATTTGTGAGATATGGTTTGCATTTTCATGGATTTTGGATCAATTCCCCAAGTGGCTCCCTGTGAACCGCGAGACATATCTTGATAGGCTAGCACTGAGATACGATAGAGAAGGAGAACCTTCTCAGTTGGCGGCTGTAGACATTTTTGTGAGTACGGTTGACCCTCTAAAGGAACCTCCTCTTGTCACGGCCAATACTGTTTTGTCTATTCTTGCAGTGGACTACCCAGTCGACAAAGTTTCTTGCTATGTCTCAGACGATGGAGCTGCTATGTTGACATTTGAAGCTTTGTCTGAAACATCCGAATTTGCAAGAATATGGGTTCCTTTCTGCAAAAAATATAACATTGAGCCAAGAGCTCCAGAGTGGTATTTTTCAAAGAAGATTGACTATTTGAAAGATAAGGTTCAACCATCATTTGCCAAAGATCGAAGGGTGATGAAGAGAGAGTACGAGGAGTTTAAAATACGAATCAATGTACTTGTTGCAAAGGCGCAAAAGATTCCAGATGAGGGGTGGATCATGCAAGATGGAACCCCTTGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGACATAGTGGAGGGCTCGACAGTGAGGGTAATGAGCTACCCCGGCTAGTGTATGTATCTCGTGAGAAGCGGCCTGGATTTCAGCACCACAAGAAGGCTGGTGCCATGAACGCACTTGTTCGTGTGTCGGCCGTGCTTACAAATGGACCCTTCTTATTAAATCTCGATTGTGATCATTACATAAACAACAGCAAGGCATTGAGGGAAGCTATGTGTTTTCTAATGGATCCTAATCTTGGCAAGTCTGTTTGTTATGTTCAATTTCCTCAGAGATTTGATGGAATTGATAGGAACGATCGATATGCAAATCGAAACACTGTGTTCTTTGATATCAATTTAAGGGGCTTGGACGGCATCCAAGGTCCAGTTTACGTCGGAACGGGATGTGTTTTCAATCGAACTGCCTTGTATGGTTACGAGCCACCTGTCAAGTCTAAGCATAAGAAACGAGGACTATTCTCTTTTGGTGGGAAAAAGAGTTCGAAATCAAGTCGGAAGGGCTCTGACGGTAAAAATTCGAGCACGCATGCCGACCCCACCGTCCCAATATTCAATCTAGAGGATATCGAAGAAGGAGTTGAAGGTTCTGGGTTTGACGATGAGAAGTCACTGCTTATGTCACAGATGAGCCTGGAGAAGAGGTTTGGTCAATCGGCCGTTTTTGTCGCTTCGACATTGATGGAGAATGGTGGGGTTCCACAGTCCGCCATTGCTGAATCTCTCCTCAAAGAAGCTATTCACGTCATTAGTTGTGGATATGAAGACAAGACAGAGTGGGGAACTGAGATAGGATGGATCTATGGCTCTGTTACAGAGGATATTCTAACGGGTTTTAAGATGCATGCTCGTGGATGGAGATCGATCTACTGCATGCCAAAGCTTGCGGCATTTAAAGGATCAGCTCCGATAAATCTTTCCGACCGTCTAAATCAAGTGCTACGATGGGCTTTAGGTTCAGTTGAAATTCTTTTCAGTCGTCACTGTCCTATATGGTATGGCTATGGAGGAAGGCTCAAATGGCTTGAGAGATTTGCTTACATTAATACCACCATTTACCCAATAACATCCATCCCTCTTCTTGCCTACTGCACGTTGCCGGCCATATGTCTCCTCACTGGCCAGTTCATCATTCCACAGATTAGTAACGTTGCCAGTATCTGGTTCATTTCTCTCTTTCTTTCCATCTTCGCCACCGGAATATTGGAAATGAGATGGAGCGGCGTTGGTATCGACGAATGGTGGAGAAACGAACAATTCTGGGTCATCGGTGGTGTGTCTGCCCATCTCTTCGCCGTTTTCCAAGGCCTGCTCAAAGTCCTCGCCGGAATCGACACAAATTTCACTGTCACCTCCAAAGCTTCCGACGAAGAGGGCGATTTTGCAGAGCTCTACATGTTCAAATGGACAACTCTCCTCATCCCTCCGACAACTCTACTCATCTTCAACTTAGTCGGAGTAGTCGCGGGAATCTCTTATGCCGTTAACAGTGGTTACCAATCATGGGGTCCTCTTTTTGGGAAGCTGTTTTTTGCTTTCTGGGTGATCATCCATCTTTATCCATTCCTTAAAGGTCTGATGGGGAGTCAGAATCGAACACCCACTATTGTTGTAGTCTGGTCTATTCTCCTTGCTTCCATTTTCTCGTTGTTGTGGGTTCGAATTGATCCTTTCACCACCCAAGTTACCGGTCCTGATGTTCAACAATGTGGCCTGCTCCCAAACGGGGATTTTGAGGTTTCACCCAACCCAGCAAACCTCAAAAAAACAGTGATTATAGGTAGACACTCGCTGCCCAAATGGGAGATCAACGGCTTGGTCGAGTACGTGTCAGGTGGGCCACAGCCACGTGGATATTTCCTAGCCGTTCCTCGCGGGGTCCATGCGGTGAGGCTGGGAAATGAGGCTTCCATTTCTCAGAGTGTGAGAGTGGAGAAAGGTTCAGTCTATGCCGTCACATTTGGAGCCACTAGGACTTGCGCGCAAGATGAGGTGATAAGGATATCAGTGGGCGGCCACTCGGCTGATCTGCCTATTCAGACCTTGTATAGCAGCGATGGAGGCGATACTTATGGTTGGGCTTTTAGGGCCATTGATGGAGTTGTTAAGCTCACTTTTCATAACATTGGAGTTCAGGAGGATCCTACTTGTGGACCCCTTTTGGATGCTGTTGCCATCAAACAGATCTTGCCTCTTGGGTACGCTAAAGGAAACCTTGTTAAAAATGGAGGGTTTGAAACAGGTCCTCATACTTTCAAAAACTTCTCAACGGGAGTTCTTCTTCCTCCTAAAAAACAAGACCTGATTTCTCCACTTCCAGGATGGATAATAGAATCCCTCAAACCAATTAAATTCATCGACAGAAAATACTTCTTCGTCCCCAGTGGAAACTATGCTGTCGAACTCGTTGCAGGAAGAGAAAGCGCCATTGCCCAGGTCATAAACACACTTCCCAACAAGTTTTACAACCTCAGTTTCACAATTGGCGATGCAAACAACAACTGCCATGGCGCCATGGAAATCCAAGCTTTTGCAGGCGTGGAAACTTTCAAGCTTCCTTACGTTTCTACAGGAAAAGGTGGCTCAAAAACTGGGAGTTTCAAGTTCAAAGCAACTTCGGCTCAAACAAAGATAACATTTTTCAGTCCGTACTATCACACAAAGCTCAAAGACTTCGGCCATTTGTGTGGTCCTGTATTGGATAATGTTGGGGTTTTTCCATTGCCTTAG | 4407 | 45.65 | MAHSHQHAPSIFEVMSGHSPVYNGEYPAFSTPGDAPTPKPVVGSCRPESQFSSTIHNSRRHFLSEHISWLDIFDFFLVLFWMSFFPLQAKASKQIGGRQVCQICSDSVGKTVDGEPFVACNVCNFPVCRPCYEYERKDGNKSCPQCKTKYKWLKGSPLLNGEEGDDSDVNGGANAPNYNSSERDMKYKLPERTLSWDTNYDKEGAFNHIPLLTTGRSVSGDLSAASPERLSMASPESLSRTNYRVMDPSREAGSNGLGGVAWKERIDGWKMKQEKSHPPMSSHAPSEGRGGADFDASTDIVMDDSLLNDEARQPLSRKVSVPSSRINPYRMVIVLRLAILSIFLHYRLTNPVPNAYALWLISVICEIWFAFSWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARIWVPFCKKYNIEPRAPEWYFSKKIDYLKDKVQPSFAKDRRVMKREYEEFKIRINVLVAKAQKIPDEGWIMQDGTPWPGNNTRDHPGMIQVFLGHSGGLDSEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKSKHKKRGLFSFGGKKSSKSSRKGSDGKNSSTHADPTVPIFNLEDIEEGVEGSGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSAIAESLLKEAIHVISCGYEDKTEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKLAAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPITSIPLLAYCTLPAICLLTGQFIIPQISNVASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEEGDFAELYMFKWTTLLIPPTTLLIFNLVGVVAGISYAVNSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGSQNRTPTIVVVWSILLASIFSLLWVRIDPFTTQVTGPDVQQCGLLPNGDFEVSPNPANLKKTVIIGRHSLPKWEINGLVEYVSGGPQPRGYFLAVPRGVHAVRLGNEASISQSVRVEKGSVYAVTFGATRTCAQDEVIRISVGGHSADLPIQTLYSSDGGDTYGWAFRAIDGVVKLTFHNIGVQEDPTCGPLLDAVAIKQILPLGYAKGNLVKNGGFETGPHTFKNFSTGVLLPPKKQDLISPLPGWIIESLKPIKFIDRKYFFVPSGNYAVELVAGRESAIAQVINTLPNKFYNLSFTIGDANNNCHGAMEIQAFAGVETFKLPYVSTGKGGSKTGSFKFKATSAQTKITFFSPYYHTKLKDFGHLCGPVLDNVGVFPLP | 1468 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 24105551 | 24115794 | - | BLOR04599 | Blo12g00580 | 67841 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00580 | 1468 | MobiDBLite | consensus disorder prediction | 704 | 740 | - | - | |
Blo12g00580 | 1468 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 87 | 175 | IPR013083 | - | |
Blo12g00580 | 1468 | SUPERFAMILY | RING/U-box | 96 | 167 | - | - | |
Blo12g00580 | 1468 | Gene3D | - | 1293 | 1447 | - | - | |
Blo12g00580 | 1468 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 423 | 929 | IPR029044 | - | |
Blo12g00580 | 1468 | PANTHER | CELLULOSE SYNTHASE | 92 | 1131 | - | - | |
Blo12g00580 | 1468 | ProSiteProfiles | Zinc finger RING-type profile. | 101 | 147 | IPR001841 | - | |
Blo12g00580 | 1468 | MobiDBLite | consensus disorder prediction | 272 | 294 | - | - | |
Blo12g00580 | 1468 | Pfam | Cellulose synthase | 409 | 1127 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Blo12g00580 | 1468 | MobiDBLite | consensus disorder prediction | 161 | 184 | - | - | |
Blo12g00580 | 1468 | Pfam | Protein of unknown function (DUF642) | 1297 | 1463 | IPR006946 | - | |
Blo12g00580 | 1468 | Pfam | Protein of unknown function (DUF642) | 1130 | 1286 | IPR006946 | - | |
Blo12g00580 | 1468 | CDD | mRING-HC-C4C4_CesA_plant | 99 | 149 | - | - | |
Blo12g00580 | 1468 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 526 | 700 | IPR029044 | - | |
Blo12g00580 | 1468 | Pfam | Zinc-binding RING-finger | 98 | 167 | IPR027934 | - | |
Blo12g00580 | 1468 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 92 | 1131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo02g00152 | Blo-Chr2:1331598 | Blo12g00580 | Blo-Chr12:24105551 | 1.50E-131 | dispersed | |
Blo05g00462 | Blo-Chr5:6861799 | Blo12g00580 | Blo-Chr12:24105551 | 8.68E-150 | dispersed | |
Blo06g00601 | Blo-Chr6:28735117 | Blo12g00580 | Blo-Chr12:24105551 | 0 | dispersed | |
Blo12g00580 | Blo-Chr12:24105551 | Blo16g00915 | Blo-Chr16:37045354 | 0 | dispersed | |
Blo18g00036 | Blo-Chr18:240944 | Blo12g00580 | Blo-Chr12:24105551 | 9.06E-117 | dispersed | |
Blo12g00580 | Blo-Chr12:24105551 | Blo12g01081 | Blo-Chr12:28512601 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00580 | K10999 | - | csv:101211779 | 1905.95 |