Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00592 ATGGCTACTTCACCCTTCTCTCCTCCATTGTTTCTCTCCCTGTCTTTTACCTTCTTCCTCCTCGCCTCAGCTTCTTCGGAGTCTGATTTTCTGCTGACTTTCAAATCTTCCATCGAGGACCCCGGTAACTTCCTCTCATCCTGGTCCAATACCTCAGCTACCCATTTGTGTAATTGGACTGGAATCCTTTGTAAGTCCTCTCTCTCCCCATTTTCTGTTACCTCCATCGATCTTCAAAGTTTCAATCTTTCTGGTGAAATTTCTTCGTCAGTTTGCCAACTTTTGAATCTAGCTCATCTTAACTTGGCTGACAATCAGTTCAACCAGCCTATTCCTCTTCATCTCTCAATGTGTTCTTCTTTGGAAACTTTAAATCTGAGTAATAATCTCATTTGGGGTACAATTCCTGATCAGATTTCTGGGTTTCTTTCCTTGAGAGTGCTTGATTTAAGTATGAATCACGTTGAGGGAAAGATTCCTTCCAGCATTGGATTGTTGAAGAATCTTCAAGTTTTGAACTTGGGGAGCAATTTGCTTTCAGGTAATGTAGATAAGGTGTTTGAGAACTTGACTGAGTTAATAATTGTTAATTTCTCACATAACTTATACTTGGTTAGTGAAATTCCTTCTGATATTGGAAAACTCGAGAAGCTCGAACAGCTTTTACTTCAAAACTCTGGTTTTCACGGTTCAATCCCTGATTCTTTGGTGGATTTGCAGAGTTTGATCATTTTAGACCTTTCCCAAAATAATCTAAGTGGTCGTCTTCCTCAGACTTTAGGCTCTGCCCTGAGTAAACTGATGCATTTGGATGTTTCACAGAACAAGCTTTTTGGGTCATTTCCGGATGGAATTTGTAAAGGAAAAAGCCTGATTAACCTCGGTCTACACACCAATTCCTTCAGCGGGCCAATTCCCGCCTCCATTACTGAATGCTCCAATCTCGAAAGGTTTCAAGTGCAGAACAATGCTTTTTCTGGTGATGTGCCAATCGGGTTTTGGTCATTACCGAAAATTAAGCTTATTAGAGTGGAAAACAATAGACTTTCTGGAGAACTCCCTGAGATGATATCGATGGCTACTCAACTGGAGCAGATTCAGTTAGATAACAACAGTTTGAGTAGTACAATACCTGAGGGTCTAGGATTGTTAAACAGTTTATATAGATTTTCTGCTTCCCTTAATCACTTCCATGGCGAACTGCCCCTGAATTTCTGCGACTCGCCAGTGATGAGCATAATTAACCTCTCCCACAATTCGCTTTCCGGCAGGATTCCTGACCCGAGAAACTGCAGGAGACTAGTTTCTTTGTCTCTGGCAGACAACAGTTTTAGTGGATCCATCCCCTCATCTCTTGCAGATTTACCAGTACTAACTTATCTTGATCTTTCTGATAACAATCTCACTGGTCCAATCCCTCAAGGGCTGCAAAATTTGAAGCTTGCTCTCTTCAATGTGTCCTTCAATCAACTGTCGGGGGAAGTCCCAAGTGCCTTAATTTCTGGTTTACCGGCTTCGTTTTTGCAAGGAAATCCTGAGCTTTGTGGGCCGGGATTGGAAAAGCCTTGTTCGGAAGGTCAATTGAAACACCATTCAACTGGTTTTACAACACTGGTATTTGTCCTCATCTCCATAGCTTTGGTTTTAGGAGTTGTGATTGTTCTTACTGGTTTTATCGCCTACAATCGATCAAACAAGCAGAAATCTCGAGATGGCGGTATTAGATCAGTGTTCTTCTATCCGCTACGCCTCAATGAACTCGATTTGACGTTAGGAATCGATGAAAAAAGCGCGAGAGGAAGTGGCGGAGCGTTTGGTAGAATTTACGTTCTAAGTTTAAGGAGTGGCGAACTAGTGGTGGTGAAGAAATTGGTGAATTTCGGGTCCCAATCGGCAAAAGCGTTGAAGGTCAAGATCAAGAACTTAGCCAAGATAAGGCATAAAAACATCACAAAGATTCTTGGGTTTTGCCACTCGGACCAGTCTCTTTTTCTCATCTATGAATTTTTACAGAAGGGAAGCCTGGGGGACTTGATTTGCAGAGGTGATTTCTGTCTCGATTGGAATGCTAGACTGAGAATTGCCATTGGAGTTGCTCAAGGCCTAGCATACCTTCACAAGGACTATGTCCCGCATTTGCTTCATCGAAATCTCAAATCATCGAACGTACTTCTCGATGCAGATTATGCCCCCAAGCTCACTGATTTTGCTCTTGATCACGTTCTTGGCGAATCTCCATTTCAGTTGACACTGGATTCGGAATCTTCATGCTCGTGCTACATTGCACCAGAGTGCCGATATTCTAAGATGGCAACCGAGCAAATAGATGTCTACAGCTTCGGCGTCGTGTTGTTAGAGCTAGTGACGGGGAGACAGGCTGAGAGGTCAGAATCGAAAGACTTTTTAGATATAGTGCAGTGGGTTCGCCGGAAAGCAAATATAATGAATGGAACTTTGCAAATCTTTGACCGGAAAATCCCAGTTTCGTTTCATCAAGGGATGGAAGAGGCGCTAAACATAGCTCTTGATTGCACTTCTGTGATGCCGGAAAAACGACCGACCATGCCTGAAGTTGTGAAAGCACTACAATCACTCATGGTAATGCCAAATGAGTTGGAGGAAGGCGGCTTAGTTTCGGAGGAAAACCTGACTTGA 2655 42.82 MATSPFSPPLFLSLSFTFFLLASASSESDFLLTFKSSIEDPGNFLSSWSNTSATHLCNWTGILCKSSLSPFSVTSIDLQSFNLSGEISSSVCQLLNLAHLNLADNQFNQPIPLHLSMCSSLETLNLSNNLIWGTIPDQISGFLSLRVLDLSMNHVEGKIPSSIGLLKNLQVLNLGSNLLSGNVDKVFENLTELIIVNFSHNLYLVSEIPSDIGKLEKLEQLLLQNSGFHGSIPDSLVDLQSLIILDLSQNNLSGRLPQTLGSALSKLMHLDVSQNKLFGSFPDGICKGKSLINLGLHTNSFSGPIPASITECSNLERFQVQNNAFSGDVPIGFWSLPKIKLIRVENNRLSGELPEMISMATQLEQIQLDNNSLSSTIPEGLGLLNSLYRFSASLNHFHGELPLNFCDSPVMSIINLSHNSLSGRIPDPRNCRRLVSLSLADNSFSGSIPSSLADLPVLTYLDLSDNNLTGPIPQGLQNLKLALFNVSFNQLSGEVPSALISGLPASFLQGNPELCGPGLEKPCSEGQLKHHSTGFTTLVFVLISIALVLGVVIVLTGFIAYNRSNKQKSRDGGIRSVFFYPLRLNELDLTLGIDEKSARGSGGAFGRIYVLSLRSGELVVVKKLVNFGSQSAKALKVKIKNLAKIRHKNITKILGFCHSDQSLFLIYEFLQKGSLGDLICRGDFCLDWNARLRIAIGVAQGLAYLHKDYVPHLLHRNLKSSNVLLDADYAPKLTDFALDHVLGESPFQLTLDSESSCSCYIAPECRYSKMATEQIDVYSFGVVLLELVTGRQAERSESKDFLDIVQWVRRKANIMNGTLQIFDRKIPVSFHQGMEEALNIALDCTSVMPEKRPTMPEVVKALQSLMVMPNELEEGGLVSEENLT 884
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 24226334 24229128 + BLOR04611 Blo12g00592 67853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00592 884 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Blo12g00592 884 ProSiteProfiles Protein kinase domain profile. 594 866 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00592 884 PANTHER - 7 871 - -
Blo12g00592 884 Gene3D Ribonuclease Inhibitor 262 526 IPR032675 -
Blo12g00592 884 SUPERFAMILY L domain-like 26 286 - -
Blo12g00592 884 SUPERFAMILY RNI-like 208 501 - -
Blo12g00592 884 Pfam Protein tyrosine and serine/threonine kinase 603 862 IPR001245 GO:0004672|GO:0006468
Blo12g00592 884 Gene3D Phosphorylase Kinase; domain 1 583 669 - -
Blo12g00592 884 Pfam Leucine rich repeat 432 491 IPR001611 GO:0005515
Blo12g00592 884 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Blo12g00592 884 Gene3D Ribonuclease Inhibitor 24 185 IPR032675 -
Blo12g00592 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 7 871 - -
Blo12g00592 884 Gene3D Transferase(Phosphotransferase) domain 1 670 874 - -
Blo12g00592 884 SMART LRR_typ_2 264 288 IPR003591 -
Blo12g00592 884 SMART LRR_typ_2 239 263 IPR003591 -
Blo12g00592 884 SMART LRR_typ_2 455 478 IPR003591 -
Blo12g00592 884 SMART LRR_typ_2 119 142 IPR003591 -
Blo12g00592 884 SMART LRR_typ_2 361 384 IPR003591 -
Blo12g00592 884 SMART LRR_typ_2 166 189 IPR003591 -
Blo12g00592 884 Gene3D Ribonuclease Inhibitor 186 261 IPR032675 -
Blo12g00592 884 SUPERFAMILY Protein kinase-like (PK-like) 602 869 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00592 Blo-Chr12:24226334 Blo08g00217 Blo-Chr8:2553633 2.57E-158 dispersed
Blo12g00592 Blo-Chr12:24226334 Blo07g01053 Blo-Chr7:30338810 2.30E-25 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84582 PF07714 PK_Tyr_Ser-Thr 4.40E-35 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00592 - - qsu:112008291 1172.92