Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00594 | ATGGAGCCAACTGCAGGATTTATCTCTGGATTCAATTCCATTGGTCCTGTACCTGAAGAATCCGGACTCGAACTTCACCAGTTTCGCGATGAGATTCATAGACTGATGTATTTCCCTCAAGAAAATTCTAGCTCATTCACTGCACTTCTGGAACTTCCTGCGATGCAAGCCATGAACCTTCTCCATTCACCCGACTCTGTCAGAGTTCCAACGACGGCGAAACTCCCGCCCCTTTCTCTCCATAATTCAGTTAGTAACAGTCACAGATTTCACTTCCAACCATTTGACGACCATTTGACCTTCCCGACTGACAGATTGACTGTTGAACGAGCAGCCAAGCTCCCGGCCTTCGCCGGAGAAAGTTTGATGGAAAAGCCGAGGTCGCTGCCGTCGAACATTCGCGCGAATTTGGAGAACGTAAAGAACGAGCTCTTCATGGAGCCTGAGGAATCAGAAGCGTTAATCTCTGATCCAACGGTGGAAAACTCCAACCAGAGATCAGATAAGAGGAAGAACCGAGAGAAGAAGGGTAAAGGATTAACGAAGAAATGCAAAAACGAAAGCTCTGAAGACTCAGAGAAGCTTCCCTATGTTCATGTCCGAGCTCGTCGCGGTCAAGCTACAGACAGCCATAGCTTGGCAGAGCGAGCGAGGAGAGAGAAGATAAACGCCCGAATGAAGCTCCTTCAAGATCTGGTCCCTGGTTGCAGCAAGATATCAGGAACGGCTCTAGTTCTCGATGAAATTATCAACCATGTTCAGTCACTGCAACGTCAAGTGGAGTTTTTGTCAATGAGACTTGCCTCAGTCAATCCAAGCATTGATTTCAATCTAGATACAATTTTGGGTGCAGAGAGCGAGTATACAACGGGTGGTAACTTTTCAAGCATGCCAACGGAATTGACGTGGGCTGATGTCCTTGTCGGTGGAAATAGGCAACACCGACGGCGAGAGCAGCGACAAGAATGGCAAATTGATGGACTTAACCAGCCCGGTTGGGAGAGAGGGGAAGAAAATCAAAATTTCATCCCTCCAGAGCACTCATTTTTGACCTACGACTCCTCTGCACATTCAGGTACACAATCCAATCCAAGTTTTTATCAAGTGGTGATTTGA | 1116 | 47.22 | MEPTAGFISGFNSIGPVPEESGLELHQFRDEIHRLMYFPQENSSSFTALLELPAMQAMNLLHSPDSVRVPTTAKLPPLSLHNSVSNSHRFHFQPFDDHLTFPTDRLTVERAAKLPAFAGESLMEKPRSLPSNIRANLENVKNELFMEPEESEALISDPTVENSNQRSDKRKNREKKGKGLTKKCKNESSEDSEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQDLVPGCSKISGTALVLDEIINHVQSLQRQVEFLSMRLASVNPSIDFNLDTILGAESEYTTGGNFSSMPTELTWADVLVGGNRQHRRREQRQEWQIDGLNQPGWERGEENQNFIPPEHSFLTYDSSAHSGTQSNPSFYQVVI | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 24232549 | 24236057 | - | BLOR04613 | Blo12g00594 | 67855 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00594 | 371 | Coils | Coil | 246 | 266 | - | - | |
Blo12g00594 | 371 | Pfam | Helix-loop-helix DNA-binding domain | 210 | 257 | IPR011598 | GO:0046983 | |
Blo12g00594 | 371 | PANTHER | TRANSCRIPTION FACTOR BHLH60 | 21 | 360 | - | - | |
Blo12g00594 | 371 | MobiDBLite | consensus disorder prediction | 180 | 195 | - | - | |
Blo12g00594 | 371 | Gene3D | - | 203 | 275 | IPR036638 | GO:0046983 | |
Blo12g00594 | 371 | CDD | bHLH_AtBPE_like | 196 | 281 | - | - | |
Blo12g00594 | 371 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 21 | 360 | IPR024097 | GO:0006355 | |
Blo12g00594 | 371 | SMART | finulus | 212 | 262 | IPR011598 | GO:0046983 | |
Blo12g00594 | 371 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 206 | 256 | IPR011598 | GO:0046983 | |
Blo12g00594 | 371 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 204 | 275 | IPR036638 | GO:0046983 | |
Blo12g00594 | 371 | MobiDBLite | consensus disorder prediction | 150 | 195 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo09g00420 | Blo12g00594 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g00594 | Blo-Chr12:24232549 | Blo13g00550 | Blo-Chr13:27394887 | 2.53E-44 | dispersed | |
Blo12g00594 | Blo-Chr12:24232549 | Blo09g00420 | Blo-Chr9:15172382 | 6.59E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13022 | PF00010 | HLH | 1.90E-05 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00594 | - | - | csv:101205014 | 370.933 |