Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00600 ATGGGGTTTTCAGAAGCTGTTCAACCTGAAGAACAAGAAACAAAGCTTGTAGCTACTGCTTTCATGGCTTCCAATATCAAAATCAACGATCATCATACCCAGTTAGAGCAACCCCACCACCAGCTTCACTTGCAGGAAAATCATCAAATTCCTTATGGAATTTTGATGAACTCATCATCTTCATCCTCGTCTGCCCCTGGAAATTTCATGAACAAAGACGGTGGAGCCTATGATTTAGGTGAATTAGATCAAGCACTTTTTCTTTATTTCGACGGACAAGACCCTTCCACTGTTCAAGACCAACGCCATAGCACCGGAATGAGACCGCCAACGCTGAACATTTTCCCATCTCAGCCAATGCACGTAGAGCCCTCTTCAACCCAAGTTGCTACTCCCGCAGTTCCTCTCTCTTCTTCATCCAATAATGGTCCAAACCGACCATTGGAGATCAGTTCGACCATGGAACTGGCCAACCCACCCAACGACGCCACTCCCTCTGGAACTCCTCCTCAACCTTCGAAATCTATCAAGCGTGAGGGTAACCGCAGAGGTCCAACGTCCAGTTCTGAGCAGGAAGGACCCAAGACGCCCGATCCTAAGACATTAAGAAGGCTCGCCCAGAATAGAGAGGCTGCGAGGAAAAGCAGGCTTAGGAAAAAGGCCTACGTTCAGCAATTAGAGACCAGTAGAATCAAGCTTACCCAGCTAGAACAAGAGCTGCAAAGAGCTAGATCTCAGGGTGTACTTTTCGGAGGAGCAAATGTGTTAGGAGATCCAGGTCTTTCGGTTGGCATCAACAACATTAGCCCTGACGCTGCCGTGTTTGATATGGAGTACGGGAGGTGGCTGGAGGAACATCACCGGATAATGTGCGAGCTCAGAGCGGCAGTGCAGGAACATTTGCCGGAAAACCAGCTCCGGCTGTACGTAGAAAACTGCATAGCACATCTGGAAGAGATGATTAACCTGAAAAGCATGGTCGCTAAATCTGACGTTTTCCATATAATTTCCGGCATGTGGATGACATTGGCTGAGCGTTGCTTTATGTGGATTGGTGGATTTAGGCCCTCTGAGCTCATCAAGATTATTTTGGGTCAAATCGAGCCATTAACGGAGCAGCAAATGATGGGAGTTTGTGGGTTACAACAATCGACTCAGGAAGGAGAAGAGGCTCTTTCTCAAGGGCTTGAAGCTTTGAATCATTCACTTTCAGAAGCCATAACCTCTGATTCATTGACTTCTCCTCCAAACATGGCTAACTACATGGGTCAGATGGCTCTAGCCATCAACAAGCTCTCCACCATTGAAGGCTTCGTCAGACAGGCAGATAATCTGAGAATTCAAACAATTCACCGGCTTCATCATGTCTTGACGACCCGTCAAAGTGCGAGGTGTTTGCTAGCAATGGCGGAGTATTTTCATAGACTTCGAGCTCTTAGTTCGCTGTGGATGGCCCGACCTAGGCAGGAATGA 1473 47.52 MGFSEAVQPEEQETKLVATAFMASNIKINDHHTQLEQPHHQLHLQENHQIPYGILMNSSSSSSSAPGNFMNKDGGAYDLGELDQALFLYFDGQDPSTVQDQRHSTGMRPPTLNIFPSQPMHVEPSSTQVATPAVPLSSSSNNGPNRPLEISSTMELANPPNDATPSGTPPQPSKSIKREGNRRGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLTQLEQELQRARSQGVLFGGANVLGDPGLSVGINNISPDAAVFDMEYGRWLEEHHRIMCELRAAVQEHLPENQLRLYVENCIAHLEEMINLKSMVAKSDVFHIISGMWMTLAERCFMWIGGFRPSELIKIILGQIEPLTEQQMMGVCGLQQSTQEGEEALSQGLEALNHSLSEAITSDSLTSPPNMANYMGQMALAINKLSTIEGFVRQADNLRIQTIHRLHHVLTTRQSARCLLAMAEYFHRLRALSSLWMARPRQE 490
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 24292970 24298236 - BLOR04619 Blo12g00600 67861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00600 490 Gene3D - 199 247 - -
Blo12g00600 490 MobiDBLite consensus disorder prediction 94 175 - -
Blo12g00600 490 Pfam bZIP transcription factor 200 240 IPR004827 GO:0003700|GO:0006355
Blo12g00600 490 ProSiteProfiles DOG1 domain profile. 272 486 IPR025422 GO:0006351|GO:0043565
Blo12g00600 490 MobiDBLite consensus disorder prediction 94 203 - -
Blo12g00600 490 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 203 218 IPR004827 GO:0003700|GO:0006355
Blo12g00600 490 SMART brlzneu 196 254 IPR004827 GO:0003700|GO:0006355
Blo12g00600 490 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 82 489 - -
Blo12g00600 490 PANTHER TRANSCRIPTION FACTOR TGA9 82 489 - -
Blo12g00600 490 Coils Coil 219 246 - -
Blo12g00600 490 Pfam Seed dormancy control 290 363 IPR025422 GO:0006351|GO:0043565
Blo12g00600 490 CDD bZIP_HBP1b-like 200 252 - -
Blo12g00600 490 SUPERFAMILY Leucine zipper domain 200 242 IPR046347 GO:0003700|GO:0006355
Blo12g00600 490 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 198 242 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo09g00369 Blo-Chr9:14405255 Blo12g00600 Blo-Chr12:24292970 5.75E-101 dispersed
Blo12g00600 Blo-Chr12:24292970 Blo17g00209 Blo-Chr17:2111317 5.79E-83 dispersed
Blo14g00231 Blo-Chr14:2035758 Blo12g00600 Blo-Chr12:24292970 1.90E-74 dispersed
Blo18g00208 Blo-Chr18:2044278 Blo12g00600 Blo-Chr12:24292970 3.77E-80 dispersed
Blo19g00015 Blo-Chr19:237782 Blo12g00600 Blo-Chr12:24292970 7.49E-14 dispersed
Blo11g00130 Blo-Chr11:979355 Blo12g00600 Blo-Chr12:24292970 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13023 PF14144 DOG1 2.00E-29 No_clan Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00600 K14431 - vvi:100262335 695.656