Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00642 ATGCTGGCCTCCAGGAGACTCCAGCCTCGACGACTTTCATCCTTCGACGCGAGATCCATCGAGCCAACGACGAGAGATCCAAGGAGCCCGAGCTTCGGCGAGCTTCGCCTGGGGTTTGCCGTCTGGCGAGCTTCGGGCCTTCCCGGGGCAAAGGGCTGGCGGGCCAGCTCGCTGGGCCAGCCCGTCGGCCAGGGCTCTCGAGCTCGGGCTCGGCGAGCTCACGAGCCTGGGTGCTCGGGCTCGGCTTGGCCCATCTACCAGGCCCAGGCCGAGCCCGCTCGTATTGAAGAAAATCTAATAGACGGAGCGCTGGAGCCGATTCAGGAAGCAGTGCAGTCCTCGAAGGCTTCCTCCGCCGCGACTGCCGCCGGGAACGGGCGGATCCGTTATCGATCTCCCTCCTCCGCCGAACTTCTTGAAGGCCAGACGGTTTCTCCTCCGCATCCTGACGACCAAAGATTGACTCAACTGGAATTTGATAAAATGCTCCGGCGGCCTGGTAAGCAACAGCCGGAGTCCATTTCCGACAAGATCTATAAACTGAGAGGAGTTTTGCTGCTCCTCTCGCTTCCTCTCCTCCTCATCTTCATTGTTCTCTTCGTAATGCCTACCGGAGACGATTATTCCTTCAACAGCCGCAAGGTGTCCCCGGACCATCGCTATAAAAATACGAACACCTTTGCTGTTATCTTTGATGCTGGTAGCTCTGGTAGCCGCGTTCATGTATTTCGCTTCGATCACAATCTCGATCTCCTTCCCATTGGTGGAGACATCGAGCTTTTCAAACAGTTAACTGATCCTTTCCATCATTGCTTTGTCAATTCATATGTTGAATTTTTTTCCTTCCAATGGCTTAAACCAGGACTTAGTGCATATGCTGACAATCCACATGGAGCTGCAGCTTCGCTTACCCCTCTCTTAGAGGAAGCAGAGAACGCAGTTCCGTTGGAGTTGCGTCCCTTGACACCTGTTAGAGTTGGGGCCACTGCAGGGTTAAGGGCACTTGAAGGTGACACTTCGGATAGAATTTTGCAAGCAGTTAGGGATCTTTTGAAACATAAAAGCACCCTCAAGTCTGAACCAGATGGGGTTGCTGTAATTGATGGAACTAAAGAAGGTTCTTATGAGTGGCTTGGAATATACTGGAATGCACTTGAAGGCATATTTTATTTACATTGTAAAGATTCACAACTTAATAATTCTTCTTCGTCACTGGGCTATAGGGAGAAGCAGCAAGTTACTATCAATTATTTGCTCGGAAATCTGGGCAAGAAATTTCAGGATACAGTTGGAATAATTGATCTTGGTGGTGGATCAGTTCAGATGGCATATGCTATTGCAGGGACTAATGCAGAGTCAAGAATATCAGACGAGGAGAATACATACCTAGAACAAATGAATTTGAAGGGAATGAAATATAACCTTTATGTTCACAGTTATTTGCATTATGGGTTGCTGGCTGCTAGAGCAGAGATTTTGAGACTCTCCGAAGAATCAGAAAACCCATGTATCTTAGCTGGCTATGAAGGTTCTTACAGCTATGGTGGAGAGAAATTTAAGGCATCTGCTGATCCATCTGGATCCAACTTGGAGGAATGCAAACGATTAGCAATTAAGGCTCTCAAAGTTAATGAACAAACTTGTACTTACATGAAATGCACGTTTAATGGGGTATGGAATGGTGGAGGAGGAGATGGCCAGAAGAATCTATTTGTTGCTTCGTTTTTCTTCGACAGAGCTGCTGAGGCTGGTTTTGCTGATCCCAAGAAACCCACTGCAGTAGTTCGACCAGCAGATTTCATAGATGCAGCCAAACGAGCTTGCCAAACTAAACTTGAAGATGCCAAGTCAGTATATCGGAATGTCAACTTAGATAACCTCCCATACTTATGCATGGATCTGGTCTACGAGTACACGTTGCTTGTCGACGGTTTTGGTCTGAATCCATGGCAAGATATAACTTTGGTGAAGCAGGTTGAATATCACAACTCTCTGGTTGAGGCAGCATGGCCTCTGGGCAGTGCTATTGAAGCAGTCTCCGCTTTATAA 2049 48.12 MLASRRLQPRRLSSFDARSIEPTTRDPRSPSFGELRLGFAVWRASGLPGAKGWRASSLGQPVGQGSRARARRAHEPGCSGSAWPIYQAQAEPARIEENLIDGALEPIQEAVQSSKASSAATAAGNGRIRYRSPSSAELLEGQTVSPPHPDDQRLTQLEFDKMLRRPGKQQPESISDKIYKLRGVLLLLSLPLLLIFIVLFVMPTGDDYSFNSRKVSPDHRYKNTNTFAVIFDAGSSGSRVHVFRFDHNLDLLPIGGDIELFKQLTDPFHHCFVNSYVEFFSFQWLKPGLSAYADNPHGAAASLTPLLEEAENAVPLELRPLTPVRVGATAGLRALEGDTSDRILQAVRDLLKHKSTLKSEPDGVAVIDGTKEGSYEWLGIYWNALEGIFYLHCKDSQLNNSSSSLGYREKQQVTINYLLGNLGKKFQDTVGIIDLGGGSVQMAYAIAGTNAESRISDEENTYLEQMNLKGMKYNLYVHSYLHYGLLAARAEILRLSEESENPCILAGYEGSYSYGGEKFKASADPSGSNLEECKRLAIKALKVNEQTCTYMKCTFNGVWNGGGGDGQKNLFVASFFFDRAAEAGFADPKKPTAVVRPADFIDAAKRACQTKLEDAKSVYRNVNLDNLPYLCMDLVYEYTLLVDGFGLNPWQDITLVKQVEYHNSLVEAAWPLGSAIEAVSAL 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 24757825 24769704 - BLOR04661 Blo12g00642 67903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00642 682 Gene3D Exopolyphosphatase. Domain 2 413 660 - -
Blo12g00642 682 Gene3D Exopolyphosphatase. Domain 2 368 388 - -
Blo12g00642 682 Gene3D - 661 676 - -
Blo12g00642 682 Gene3D - 227 367 - -
Blo12g00642 682 MobiDBLite consensus disorder prediction 53 78 - -
Blo12g00642 682 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 411 681 IPR000407 GO:0016787
Blo12g00642 682 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 281 381 IPR000407 GO:0016787
Blo12g00642 682 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 162 265 IPR000407 GO:0016787
Blo12g00642 682 MobiDBLite consensus disorder prediction 1 32 - -
Blo12g00642 682 PANTHER APYRASE-LIKE PROTEIN 411 681 - -
Blo12g00642 682 PANTHER APYRASE-LIKE PROTEIN 281 381 - -
Blo12g00642 682 Pfam GDA1/CD39 (nucleoside phosphatase) family 413 680 IPR000407 GO:0016787
Blo12g00642 682 Pfam GDA1/CD39 (nucleoside phosphatase) family 222 381 IPR000407 GO:0016787
Blo12g00642 682 PANTHER APYRASE-LIKE PROTEIN 162 265 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00642 Blo-Chr12:24757825 Blo16g01115 Blo-Chr16:39641576 5.69E-32 dispersed
Blo01g01687 Blo-Chr1:56582528 Blo12g00642 Blo-Chr12:24757825 3.38E-13 transposed
Blo02g01177 Blo-Chr2:43441797 Blo12g00642 Blo-Chr12:24757825 5.09E-11 transposed
Blo11g00092 Blo-Chr11:718990 Blo12g00642 Blo-Chr12:24757825 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00642 K14641 - csv:101220305 606.29