Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00672 ATGGCTTTGGCCCCGGCAATGGCGGTTGCGAGGCCGAACGCGACGACGATTTTCTCTCTATCTACACGAAGAACTAAGCGCCTTTTTACCTTTTCAATTGCTGCCTCTCGCTCTCACTCGTCGTCATCTTCTTCTTTTTCTGGAACACTGGTCCTCTACTCCAAGCCCGGATGCTGTTTGTGCGATGGTCTCAAAGAAAAACTTCAGGCTGCATTCTTGCTATCTGGACCTGATTCTCTCCACGACGTTCAACTACAGGTAAGAGACATTACCACCAACCCTGATTGGGAAAATGCGTACCAGTACGAGATACCTGTTCTGGCCAAAGTTCTCTCTGATGGTTCTGAGAGAAATGGTTTGAGTCATTACTCAATAACTGTCCATTCCTTTTCTTCTCAACCAGCAAATTGTGTTGCTTTATATGGTGGAAGTTCTTTTGACTCTTACCAACCCAAGAAAACAAGACCGAAGATGACTCTGCCCGTCTTTTTAAGGATAATGCTTCTTGCTTTCCTCGAGCCTGTGCTTGATCAAAACCTTTACTACGTGGGAATGAAGTATACCTCAGCAACCTTTGCATCTGCCATTGTCAATGTTCTCCCCGCCGTTACTTTCATCATGGCTATCATGTTCAGGCTGGAGAGTGTGAACTTGAAGAAAATAGAGAGCATAGCAAAGGTCGGCGGAACGGTAGTGACTGTGACAGGAGCCATGATAATGACGATGTACAAAGGGCCTCTCGTCGATATCATACACGGGAATGCCCGGGTAGGAGTCAACCATGCCGCCTCTAATCTATCAAATTCCGACCAACACTGGGTCACTGGTACTCTCATGCTCTTGTGCAGTTGCTGCGGCTGGGGTGCCTTCTTCATCGTGCAATCGTTCACGTTAAAGAAGTACCCGGCTGAGCTTTCGCTGAGTGGGTGGATATGCTTGATGGGGACGGTGGAAGGGGCGGTGGTGTCGCTCGCGATGGAACGAGACATGAGCGCTTGGGTTTTAGGTTGGGATTCGAGGCTTCTGGCTGCTGCTTACACAGGAGTGGTTTGCTCTGGAATTGCATATTACCTACAAGGAGTGGTGATCAAAGAGAAAGGCCCTGTTTTTGTGACCTCTTTCAGCCCTCTAATCATGATCATCACAGCTGCTCTGGGCTCCATCATTTTAGCCGAGCAAATCCACCTAGGAAGCATAATCGGAGCCATTCTGATAGTTGTGGGGCTGTACACAGTCGTGTGGGGCAAAAGCAAAGACCAGCAAAACAACGGAAAGATAACAGAGGGTAAGGAGAGTGGCGTTCAGTTGCCCATCACTCGCACCGGCAAATCTGCCTCGCCTCACTGCAATCACGTCGACGCCGTTTCAAAGCCCGCTGCTCTCGCCTCTCACTTGTGA 1398 49.14 MALAPAMAVARPNATTIFSLSTRRTKRLFTFSIAASRSHSSSSSSFSGTLVLYSKPGCCLCDGLKEKLQAAFLLSGPDSLHDVQLQVRDITTNPDWENAYQYEIPVLAKVLSDGSERNGLSHYSITVHSFSSQPANCVALYGGSSFDSYQPKKTRPKMTLPVFLRIMLLAFLEPVLDQNLYYVGMKYTSATFASAIVNVLPAVTFIMAIMFRLESVNLKKIESIAKVGGTVVTVTGAMIMTMYKGPLVDIIHGNARVGVNHAASNLSNSDQHWVTGTLMLLCSCCGWGAFFIVQSFTLKKYPAELSLSGWICLMGTVEGAVVSLAMERDMSAWVLGWDSRLLAAAYTGVVCSGIAYYLQGVVIKEKGPVFVTSFSPLIMIITAALGSIILAEQIHLGSIIGAILIVVGLYTVVWGKSKDQQNNGKITEGKESGVQLPITRTGKSASPHCNHVDAVSKPAALASHL 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25021362 25027581 - BLOR04691 Blo12g00672 67933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00672 465 Pfam Glutaredoxin-like domain (DUF836) 49 113 IPR008554 -
Blo12g00672 465 Gene3D Glutaredoxin 45 131 - -
Blo12g00672 465 SUPERFAMILY Multidrug resistance efflux transporter EmrE 159 239 - -
Blo12g00672 465 PANTHER WAT1-RELATED PROTEIN 117 434 IPR030184 GO:0016021|GO:0022857
Blo12g00672 465 SUPERFAMILY Multidrug resistance efflux transporter EmrE 333 418 - -
Blo12g00672 465 SUPERFAMILY Thioredoxin-like 49 115 IPR036249 -
Blo12g00672 465 PANTHER WAT1-RELATED PROTEIN 117 434 - -
Blo12g00672 465 Pfam EamA-like transporter family 276 413 IPR000620 GO:0016020|GO:0016021
Blo12g00672 465 Pfam EamA-like transporter family 156 225 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00672 Blo17g00181 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00672 Blo-Chr12:25021362 Blo17g00181 Blo-Chr17:1847688 4.07E-103 dispersed
Blo12g00672 Blo-Chr12:25021362 Blo01g01133 Blo-Chr1:40830875 1.17E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00672 - - mesc:110605754 423.705