Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00683 ATGCCTGCAACAATGGCGAAGGATAGAAGCCAGAGAAATCCCACAAAAATTGTTGAAAAAAATGAAAACTACCAACCCCAGAAGACGGAAAAGCCACTACCTTGGTCTGTGGTTAGAGGCCTATTGAGCTGTAGATATCTCCAACCCCAGCCACAATCTCTACAAATGGTCAGAAAAGAGCAGCAGAAGCTCAAACCAGAAACATCCATGGAGGAGAATGGCAAGAAATGCAAGAAAATGAGATGGTCCGGCTCACTTTGTAGCAACTCGAAGATAGTGCAAAGGCCTGATCAAACTGGGTTTCCTCAGGTCCACAAGAAAAGGACTTCTTTTAGCGCAGGAAACGATGGCTACTCTTCGAGTAGATCCATGAAAGCTCCTCTCCGTGAACTCAATGGGGTCGTCATTTCTGCCCTTTCTTCTTCTTCTTTATCTGCATCCTCAAACTCCTCCAACGGCGGCTCTTCTAGATCGGGGAAGTCTTTTAGAAAATTCTATGGCTGTTATGAGTGTAAGATGGTGGTAGATCCTGTTCTTGGAGTCATTAGAGATCCTTCTCTCAGAGATAATATTTTTCCTTGTCCTGACTGTCGTGAAATCTTCAACAAGACTGAAAGTTTGGAGCTTCATCAATCCATCAGCCATGCAGTGTCTGAACTGGGTCCTGAGGATACAAGCAGGAACGTAGTAGAAATCATATTCCAGTCAAGCTGGCTAAAGAAACATGCCCCCATTTGCAAAATCAACCGAATACTCAAAGTCCACAACACCCAAAAGACAATCTGCAAATTCGAAGAGTACAGAGACGCCATTAAAGCCAAATCAGCAAAGCTTCCAAAGAAGTACCCACGCTGCATAGCAGACGGCAATGAGCTCCTCAGATTCCACTCCACCACTTTGGCCTGCGCGCTCGGCCAAAACGGGTCATCCAATCTCTGCAACGCAATCACCCGCTGCGGCGTCTGCAGCATCATAAAGAACGGCTTCAAAGTGTCGCCGGAAGAGGGAGTTCTGACGACGGCGACGAGTGGGAAAGCCCACGACAGCACAGGAGCGACGCCGGACGGTGATGGACGGCGGGCGATGCTGGTTTGCCGGGTGATTGCGGGGAGAGTGAGGAGGAGCTCGGAAATGAGTAGGGAAGAGTACGATTCGGCGGGGGGAGCAGTGGAAGTGTATTCCAATTTGGAAGAGTTGCGCGTCTTCAATCCAAATGCTATTCTTCCTTGCTTTGTCGTCATCTATGGAGGATTTTAG 1257 48.13 MPATMAKDRSQRNPTKIVEKNENYQPQKTEKPLPWSVVRGLLSCRYLQPQPQSLQMVRKEQQKLKPETSMEENGKKCKKMRWSGSLCSNSKIVQRPDQTGFPQVHKKRTSFSAGNDGYSSSRSMKAPLRELNGVVISALSSSSLSASSNSSNGGSSRSGKSFRKFYGCYECKMVVDPVLGVIRDPSLRDNIFPCPDCREIFNKTESLELHQSISHAVSELGPEDTSRNVVEIIFQSSWLKKHAPICKINRILKVHNTQKTICKFEEYRDAIKAKSAKLPKKYPRCIADGNELLRFHSTTLACALGQNGSSNLCNAITRCGVCSIIKNGFKVSPEEGVLTTATSGKAHDSTGATPDGDGRRAMLVCRVIAGRVRRSSEMSREEYDSAGGAVEVYSNLEELRVFNPNAILPCFVVIYGGF 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25082669 25084010 - BLOR04702 Blo12g00683 67944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00683 418 MobiDBLite consensus disorder prediction 96 123 - -
Blo12g00683 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
Blo12g00683 418 ProSitePatterns Zinc finger C2H2 type domain signature. 194 215 IPR013087 -
Blo12g00683 418 MobiDBLite consensus disorder prediction 1 31 - -
Blo12g00683 418 SUPERFAMILY ADP-ribosylation 217 416 - -
Blo12g00683 418 Gene3D - 215 416 - -
Blo12g00683 418 ProSiteProfiles Zinc finger C2H2 type domain profile. 192 220 IPR013087 -
Blo12g00683 418 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 35 415 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00683 Blo17g00187 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00683 Blo-Chr12:25082669 Blo19g00233 Blo-Chr19:11583379 1.33E-32 dispersed
Blo03g00587 Blo-Chr3:23006884 Blo12g00683 Blo-Chr12:25082669 7.95E-65 transposed
Blo10g00801 Blo-Chr10:25382475 Blo12g00683 Blo-Chr12:25082669 2.16E-71 transposed
Blo12g00885 Blo-Chr12:27044154 Blo12g00683 Blo-Chr12:25082669 5.95E-94 transposed
Blo17g00187 Blo-Chr17:1909693 Blo12g00683 Blo-Chr12:25082669 1.01E-134 transposed
Blo11g00062 Blo-Chr11:482278 Blo12g00683 Blo-Chr12:25082669 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13035 None None None None Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00683 - - zju:107421015 524.242