Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00695 ATGGGTCGAGCTAAGCTGCAGATAAAGAGAATAGAAAACAGCTCCAGCCGACAGGTGACCTTCTCAAAGCGCAGAGATGGACTCATCAAGAAAGCCTACGAGCTTTCTGTCCTTTGCGACATCGACATCGCCCTCATCATGTTCTCTCCTTCCGGCCGTCTCTCCCATTTTTCCAGCAAACCAAGGATTGAAGATGTACTATGTCGTTACATTAATCTCTCTGATCAAGAAAGAATACAAATGGAGGTACAAAACTTGATAATTCAATCAAAAGGAATAATTGTTTATTTATCAAAAAACTTGAGCTTAAGTTGTGGAGATTTTGCTTGTAAATTCAACAAAAACCAGCAGCGAGGGACGGCGAGCTCTTTGGAAAATGTAGAAGGCAATGAAGTAGGAGAGGCTTGGTTACCTGACCAAGTTTTTGAAGCCTCTCTAAGCAATCTGTCGGGCACGGTTGATGGTCATTTTTCTGAGGCCATGACGTCGAACACGAGGCTGCCCTCTTTTTCTCAACCTCAAGCAGACATTGCTTCGGCCTCCGTCCCTGAAATGGAGGGTTCTGCAAGTGCGAGCTATTCAGAGTTGATGCCTCGTGATTTGCGACGTGACAGGTCGTTTATTCAATATTCACAGGCAGTGCTTCCAGTTCCAAATCAACTCATTCAGGTGAGGCTCTTAAGTTTTGGGGCGAAAGAGATGGATAGTGGGAGTTTGTCGGCTGCTGATGAGCAACTACAAAACGAGACGTTCATTCATAAAGTGGGAATTCCTCCAAAGCAAAACCTCTACAAGGAATTCAAGAGCAATTTAAAAGAAACATTTTTTGCAGACGATCCTCTCCGATCTTTCAAGGATCAACCCCAGTCTCGGAAATTAATCTTAGGCATTCAAGCTGTTTTTCCTATTCTCGAGTGGGGAAGAGGCTACGATTTATCTAAATTTAGAGGGGATCTAATTGCAGGACTGACCATTGCAAGTCTCTGCATTCCACAGGACATTGGGTACGCAAAGCTGGCCAATTTGGCTCCTCAGTATGGGCTGTACTCGAGCTTTGTTCCGCCATTGATTTATGCTGTCATGGGTAGCTCAAGAGATATAGCCATTGGACCAGTGGCTGTTGTTTCTCTCTTGTTAGGGACTCTTCTTCAAGCCGAGATCGATCCCATTACAAACACGGCGGAGTATTTGCGACTTGCATTTACGGCTACATTTTTCGCCGGAATCACTCAAGCCTCCCTCGGAATTTTGAGGTTGGGATTCTTGATCGACTTCTTATCTCACGCTGCCATTGTCGGATTTATGGGCGGAGCAGCCATAACCATTGCTCTTCAACAGCTCAAGGGATTTCTTGGCATAAAAAAATTCACGAAGAAGACAGATATAATCTCCGTTATGCACTCAGTTATCGGTTCAGCCCGCCATGGATGGAACTGGCAGACCATAGCCATTGGAGCAAGCTTTTTAAGTTTTCTCCTCTTTGCAAAATACATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTGCTCCTCTGATATCTGTTGTTCTATCCACTGCTTTAGTTTACATTACTCATGCAGAAAAGCAAGGGGTTCAAATTGTGAAGCACATAGAGAAAGGAATAAATCCAATATCAGTTAATCAAATATTCTTTTCGGGCGATTACCTCGTCAAAGGTTTTAGGATCGGGTTTGTCGCCGGAATGATCGCTCTGACGGAAGCCATTGCAATAGGAAGAACATTTGCTGCGATGAAAGACTACCAAATCGATGGAAACAGAGAACTGGTTGCTCTAGGAACTATGAACATTGTTGGCTCGATGACTTCCTGCTACGTGGCTACTGGTTCATTTTCTCGGTCGGCCGTGAATTATATTGCCGGCTGTCGAACTGCAGTTTCCAACATTGTGATGTCTGTTGTTGTGTTCCTGACTTTGCTGTTTATCACCCCGCTTTTCGAGTACACTCCAAACGCCATTCTTGCCGCCATCATTATATCGGCTGTGATCAACCTGATCGACTTTCAGGCTGCGATTTTGATATGGAAGATTGATAAATTTGATTTTGTGGCTTGCATGGGAGCTTTCTTTGGTGTTATTTTTGCCTCTGTCGAAATCGGCCTTCTGATTGCGGTCTCTATTTCATTCGCTAAAATCCTCTTACAAGTCACGCGGCCAAGAACTGCAGTTCTAGGCAAAATCCCCCGGACGACGGTGTACAGAAATGTCCTACAGTATCCCGATGCGACTAAGGTTCCCGGCGTTTTGATTGTTCGAGTCGATTCTGCAATTTACTTTTCCAACTCAAATTACATCAAAGAAAGGCTACTGAGATGGTTGACAGATGAAGAAGAACAAATAAAGAAATCTTACCAACCAAAAATCAAGTTTTTGGTGGTTGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGTTGTATAGGAGCCTCCACAAGAGAGATGTTCAGCTTGTTCTGGCAAATCCTGGGTCGGCAGTGGTAGACAAGCTTTATTCGTCCGGTTTTGATAGTTTGATCGGCCACGACAACATCTTCCTCACCGTTGCCCAAGCCATCTCGGCCTGTTCTCCGAAATTGGTGGAAGAAGCTTGA 2637 44.25 MGRAKLQIKRIENSSSRQVTFSKRRDGLIKKAYELSVLCDIDIALIMFSPSGRLSHFSSKPRIEDVLCRYINLSDQERIQMEVQNLIIQSKGIIVYLSKNLSLSCGDFACKFNKNQQRGTASSLENVEGNEVGEAWLPDQVFEASLSNLSGTVDGHFSEAMTSNTRLPSFSQPQADIASASVPEMEGSASASYSELMPRDLRRDRSFIQYSQAVLPVPNQLIQVRLLSFGAKEMDSGSLSAADEQLQNETFIHKVGIPPKQNLYKEFKSNLKETFFADDPLRSFKDQPQSRKLILGIQAVFPILEWGRGYDLSKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQAEIDPITNTAEYLRLAFTATFFAGITQASLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKKFTKKTDIISVMHSVIGSARHGWNWQTIAIGASFLSFLLFAKYIGKKNKKLFWVPAIAPLISVVLSTALVYITHAEKQGVQIVKHIEKGINPISVNQIFFSGDYLVKGFRIGFVAGMIALTEAIAIGRTFAAMKDYQIDGNRELVALGTMNIVGSMTSCYVATGSFSRSAVNYIAGCRTAVSNIVMSVVVFLTLLFITPLFEYTPNAILAAIIISAVINLIDFQAAILIWKIDKFDFVACMGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRTAVLGKIPRTTVYRNVLQYPDATKVPGVLIVRVDSAIYFSNSNYIKERLLRWLTDEEEQIKKSYQPKIKFLVVEMSPVTDIDTSGIHALEELYRSLHKRDVQLVLANPGSAVVDKLYSSGFDSLIGHDNIFLTVAQAISACSPKLVEEA 878
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25205369 25215772 + BLOR04714 Blo12g00695 67956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00695 878 TIGRFAM sulP: sulfate permease 302 866 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo12g00695 878 CDD STAS_SulP_like_sulfate_transporter 748 863 - -
Blo12g00695 878 Pfam STAS domain 748 866 IPR002645 -
Blo12g00695 878 SUPERFAMILY SpoIIaa-like 749 871 IPR036513 -
Blo12g00695 878 Gene3D - 13 91 IPR036879 GO:0003677|GO:0046983
Blo12g00695 878 Pfam Sulfate permease family 315 695 IPR011547 GO:0016021
Blo12g00695 878 ProSitePatterns SLC26A transporters signature. 344 365 IPR018045 GO:0008271|GO:0008272
Blo12g00695 878 ProSiteProfiles STAS domain profile. 747 870 IPR002645 -
Blo12g00695 878 SUPERFAMILY SRF-like 2 86 IPR036879 GO:0003677|GO:0046983
Blo12g00695 878 ProSiteProfiles MADS-box domain profile. 1 61 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 CDD MADS_MEF2_like 2 75 IPR033896 GO:0000977|GO:0045944
Blo12g00695 878 PRINTS MADS domain signature 38 59 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 PRINTS MADS domain signature 23 38 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 PRINTS MADS domain signature 3 23 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 Gene3D STAS domain 727 873 IPR036513 -
Blo12g00695 878 PANTHER SULFATE TRANSPORTER 1.2-LIKE 232 877 - -
Blo12g00695 878 PANTHER SULFATE TRANSPORTER 232 877 IPR001902 GO:0015301|GO:0016020|GO:0055085
Blo12g00695 878 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 10 57 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 SMART madsneu2 1 60 IPR002100 GO:0003677|GO:0046983
Blo12g00695 878 ProSitePatterns MADS-box domain signature. 3 57 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g01287 Blo-Chr4:27202141 Blo12g00695 Blo-Chr12:25205369 0 dispersed
Blo11g00048 Blo-Chr11:383082 Blo12g00695 Blo-Chr12:25205369 6.52E-16 dispersed
Blo12g00337 Blo-Chr12:19137569 Blo12g00695 Blo-Chr12:25205369 0 dispersed
Blo12g00695 Blo-Chr12:25205369 Blo18g00202 Blo-Chr18:1993718 0 dispersed
Blo04g00938 Blo-Chr4:11196282 Blo12g00695 Blo-Chr12:25205369 1.75E-31 transposed
Blo04g01370 Blo-Chr4:32212291 Blo12g00695 Blo-Chr12:25205369 9.34E-07 transposed
Blo14g00437 Blo-Chr14:5080090 Blo12g00695 Blo-Chr12:25205369 3.69E-37 transposed
Blo11g00047 Blo-Chr11:377552 Blo12g00695 Blo-Chr12:25205369 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13037 PF00916 Sulfate_transp 1.20E-129 CL0062 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00695 K17470 - jre:108997232 1069.68