Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00698 ATGGGCTCTCGAGGACGAGTATTATTTGATCTTAATGAACCTCCTGCTGAGGATATTGAAGTTGGTGATGGGGCTGTTTACCAGCCACAAAAGGCTTTTCCATCTTCAAATCTCCACACATCAGACCTGTTTTCGGAGTCAGGCAGTTGTCAAAGAATAATGAATAATTTTGCCTTTTCACATGCTTTGTCTCGATCTGGGTTCCAGCCTTTTGTTCGAACAAAATCTGCACATCACCCTGAGGTGGATGAAGAACTTGAGAAAGCAGATCATCATAACTCCAAGATTGCATCTTCATCCAATTCAGACAAGGATGAGATGATGACACCATTTGTATCAGGTTCTAGAGAGGCTCAACTCGAGGATAGGGAAGAAGGAGAATGGTCTGATGCTGAGGGCTCTGCTGATGCATATACTGGTTCTAATCTGCAGGATCATTCTAAAAATGCACAAGAGCAAGAATTACCTTCTGTCTCCAGGGTGACTGTTGAGAACAGTTCTTTAAATCCTCCAAGTTCTGATTTTATCATGGATGAAAGTGCTAGTTTTGTTTCTGTAGAATCATACATAGATCATGTTAACGGAAAAAGCAATGGAACCAGGACTTTGGAATGGAATGCTAAAGGTGAACCCATGGATGGCCATGCTGACCTTGGCTCTGGAAAAAACCATAGAGAAGTTAAAGGAATTGAAGCAAGTCATGCACTTAAATGTGCTAATAATTTTGGTAAAAGAAAAGTAGATCAACAGCAAGAAGCTAAGCTTGGAAAGAAACGAAGCAGACAAACTATGTTTCTTAACTTAGAAGATGTAAAGCAGGCTGGCCCTATGAAATCCTCTACCCCCAGGAGGCAGACCTTTCTGCCACCAATTACCACACGTATTGTGAAAGAAATTCGCATTACCACTCCACTCATTGAACATGCAGTTGAAAAACAGCAAGCCTCTAAGAGGGATTTAAAACAGGGTGACATATCATGTGATGAAGGTGGCATGGAATCTGCAGAACCTAAATCTGATTCGAATGGTGATGGTAATTTTGGTCTCTTAGCTAGGCCTAGTAAGCTAAACAGCGATGGAGATTTTTTGACAGACCCTTCATCGCCACCCTTTGCTAGACAGGGTTTGTGGAAACAGCCAACAAATTCTAGACAGTTAAAGAATACTCAGGTTTGCAATCGGAAACCTGCAAAAACAAATCAAAATGCAATGGAGATAAAAATAGTGAGCATGAAACATCTCCAGGTAAAAAAGCCAAATGTTGTTAGTACACCATATCAGGACACATCAGTTGAACGACTCATACGGGAAGTTACTAATGAGAAGTTTTGGCATAGTCCAGAGGAGACCGAACTTCAGTGTGTGCCTGGTCGATTTGAATCTGTAGAAGAATATGTTAGAGTGTTTGAACCTTTACTGTTTGAGGAATGTCGGGCGCAGCTTTACAGTACGTGGGAGGAATTTACTGAAACGGTATCAAGGGATACTCATGTGGTGGTTCGCATAAAGAACATTGAAAGAAGAGAAAGAGGGTGGTATGATGTGATAGTTCTTCCTGTGAATGAGTGCAAGTGGTCATTCAAGGAGGGGGACGTGGCAATTCTTTCATCTCAAAGACCGGGATCAGTTAGATCAAAGCGAAATACTACATCCTCAATGGAAGAAAATGATGAGCCTGATTTTAGTGGACGTGTAGCTGGAACAGTTCGAAGACACATTCCTATTGATACTCGCGATCCTCCTGGGGCAATCCTTCATTTTTATGTTGGGGACTCTTATGATTCTAATAAGGTTGATGACGATCATTTATTAAGAAAACTTCAGCCAAAAGGGGTATGGTATCTGATGGTGCTTGGTTCCATTGCGACCACCCAGCGGGAGTACATTGCTTTGCATGCATTTCGCCGTCTGAATTCACAGATGCAAACTTCAATTCTTCAACCTTCTCCAGAGCAATTCCCAAGATATGAACAGCAGCCTCCTGCCATGCCAGAGTGCTTTACTCAGAACTTTGTTGATCATTTACATAGAACCTTTAATGGGCCACAATTAGCAGCTATTCAATGGGCCGCAATGCATACAGCTGCTGGTACAGGTAGTGGGACAGCAAAAAGGCAAGATCCATGGCCTTTTACCCTTGTACAAGGTCCTCCAGGAACAGGTAAGACTCACACAGTCTGGGGAATGTTAAATGTTATCCATCTGGTACAATATCAGCACTACTATACTTCTTTGCTAAAGAAATTAGCTCCTGAAAGCTATAAGCAAGGTAACGATAGCAGTTTAGACAATGTTATGATTGGATCAATAGATGAGGTGCTTCAAAACATGGATGAGAATCTCTTCCGCACGCTTCCTAAGCTATGTCCAAAACCAAGAATGTTAGTTTGTGCACCTTCTAATGCTGCTACAGATGAGCTTCTAGCACGTGTTCTTGATCGTGGATTCATTGATGGTGAGATGAATGTTTATCGACCTGATGTAGCTAGAGTTGGCGTCGACTCTCAAACTCGCGCTGCTCAAGCAGTGTCAGTGGAGAGGAGAACAGAACAACTTTTGATGAAAAGTCGAGAGGAAATTTTAGGATGGATGCACCAGCTCAAAGGTCGTGAAGCTCAATTATCTCAGCAGATATCGATTCTTCAAAGAGAACTGAATGTCACTGCTGCTGCTGTTAGATCTCAAGGTTCAGTTGGTGTGGATCCTGATGTGCTGGTAGCTCGAGACCAAAATCGAGACTCATTGTTGCAGAACCTTGCTGCTGTTGTTGAAGGGAGGGACAAAATCTTAGTTGAGATGTCTCGCCTTTTCATTTTAGAAAGCAAGTTCAGAGCTGGCAGCAACTTCAATTTGGAAGAAGCGCGTGCTAATCTCGAGGCAAGCTTTGCAAATGAGGCTGAGATTGTTTTTACTACTGTCTCCAGCAGTGGTCGCAAATTGTTCTCTCGTCTTACTCATGGTTTTGATATGGTGGTTATAGATGAAGCAGCTCAAGCCAGTGAAGTGGCTGTTCTTCCTCCACTGTCTCTGGGTGCAGCACGATGTGTGCTTGTCGGTGATCCTCAGCAGCTTCCAGCAACAGTTATCAGCAAGGCTGCTGGAACCTTGCTTTACAGTAGGAGCCTTTTTGAGAGGTTCCAGCTGGCTGGATGTCCTACTATGTTGTTATCTGTACAGTATAGGATGCATCCTCAAATAAGAGATTTTCCCTCAAGGTACTTTTATCAAGGGCGCCTTACTGACAGTGATAGCGTTGCTAATTTACCTGACGAGGCATATTACAAAGACGTCTTACTTAAACCTTACATCTTTTATGATATTACCCATGGACGGGAATCTCACAGAGGAGGGTCTGTTTCCTATCAAAATATACATGAGGCACAATTTTGCCTTCGGTTATATGAGCACCTTCAGAAAACTTTGAAATCATTGGGGATGGGAAAAGTTTCTGTTGGCATTATCACACCGTATAAGCTACAACTTAAATGTCTTCAACGCGAGTTTGAAGATGTTTTGAGTACAGAAGAAGGGAAAGACTTATACATAAACACTGTTGATGCATTTCAAGGCCAAGAGCGTGATGTGATCATCATGTCCTGTGTTCGAGCTTCAGGTCATGGTGTTGGCTTTGTTGCGGATATTCGTCGCATGAATGTCGCACTTACTCGTGCAAGAAGGTCACTTTGGGTTATGGGTAATGCTACTGCTTTGGTGCAATCGGATGACTGGGCAGCATTGATCACTGATGCCAAAGGAAGAAACTGTTATTTGAACATGGACTCTCTTCCTAAGGACTTTCTGGTATCCAAGGGTCCTGCTTATGTTGCATTGCCAGGAAAGATCTCAAATATGAGAGGTTCGAGATCAACTGGGCTAAGACACATGTCTTTGGACTTGCATGTAGAGTCCAGGTCTGGAACTCCGTCAGAAGATGACGAGAAGTCAAATTCATCAGTTATCTCTAGGAATGAAATCCATCGTCCCTTAAAACCACCTATTGAGAATTCGTTGGATGAATTTGATCAATCATGTGATAGAACTAGGGATGCCTGGCCACATGGCTCACAAAAGAAGCAAAGTTCTGCTGGGAATGGTGGTTGTGATAGGATTCCAAACTGGGGTTTGGAAAAGTGCAGAAGTGAACAAAGGAATAAGGGAGACTCATGGGGAGTGCTCGGACTTATTTTTGATGGAATGGACTTAGCTAGCCTTACTAAGTGTGGAGAGAGTATTAACTTGAGGGACCAAGTGCCTAGTTCACAAACAATGAATGCAAATTTAAAGAAATCTCCTTCAAATGGCTGTGAGAACCCTGTCTCATCTGAAGAACAGCAACAGAAGATTTATGAGATTCGAAGGCTGTTAGGGCCTTTGTCGGGTAAGTTGTCTGTTTATTGTTCTGATGCATCCATTTTGAGATACCTAAGGGCCAGAAACTGGAACGTCAAGAAAGCAGGAAAAATGCTAAAAGAATCATTAAAATGGCGGTCACAGTACAAGCCAGAAGAGATTAAATGGGAAGATGTTGCCCATGAAGCAGAGACAGGAAAAATTTACAGGACGAATTACATTGACAAACATGGGAGAACGGTTCTAGTGATGAGGCCAAGTCGTCAGAACTCAAAGAGCATAAAAGGGCAGATGAAGTATTTGGTCTATTGCATGGAGAACGCCATTTTGAATCTGCCTTCAGACCAAGAACAGATGGTCTGGTTGATTGATTTTCAAGGCTTCAATTTGTCCAATATTTCTGTGAAGGTGACGCGAGAAACTGCTAATGTTTTACAAGATCATTATCCAGAACGTCTTGGTATGGCAATACTATACAATCCACCAAAGTTCTTCGAGCCATTTTGGACGGTGGTGAAGCCATTTCTAGAACCAAAGACTGTAAACAAAGTTAAATTCGTCTACTCTGATGATCTTAGCTCCCAGAAGGTGATGGAGGATCTTTTCGAGATGGAGAAGCTGGAATCTGCATTTGGTGGAACGGATCCTACAGGTTTTGAGATAACCAAATATGCCGAGAGAATGAGAGAAGACGACAAAAGGATGCCTGCTTTCTGGACAGGATCAAGCCCCCCATTGTCAACCTCAGAGCAAGCCATGCTTAGTGCTCCTCTCGATCTAGACTCTAGCTCTGATTCTTCTGACAATGATAAAACAGATTGCGACCCATTGGATAAAATTGCACCAGAAGAAGATCTCTCCCCAGAGCATGATACGACGGTCGTGATTGGCTATGGTGGAAGCAGTGGCACTAGCTCATTGGTGCTTTAG 5280 42.77 MGSRGRVLFDLNEPPAEDIEVGDGAVYQPQKAFPSSNLHTSDLFSESGSCQRIMNNFAFSHALSRSGFQPFVRTKSAHHPEVDEELEKADHHNSKIASSSNSDKDEMMTPFVSGSREAQLEDREEGEWSDAEGSADAYTGSNLQDHSKNAQEQELPSVSRVTVENSSLNPPSSDFIMDESASFVSVESYIDHVNGKSNGTRTLEWNAKGEPMDGHADLGSGKNHREVKGIEASHALKCANNFGKRKVDQQQEAKLGKKRSRQTMFLNLEDVKQAGPMKSSTPRRQTFLPPITTRIVKEIRITTPLIEHAVEKQQASKRDLKQGDISCDEGGMESAEPKSDSNGDGNFGLLARPSKLNSDGDFLTDPSSPPFARQGLWKQPTNSRQLKNTQVCNRKPAKTNQNAMEIKIVSMKHLQVKKPNVVSTPYQDTSVERLIREVTNEKFWHSPEETELQCVPGRFESVEEYVRVFEPLLFEECRAQLYSTWEEFTETVSRDTHVVVRIKNIERRERGWYDVIVLPVNECKWSFKEGDVAILSSQRPGSVRSKRNTTSSMEENDEPDFSGRVAGTVRRHIPIDTRDPPGAILHFYVGDSYDSNKVDDDHLLRKLQPKGVWYLMVLGSIATTQREYIALHAFRRLNSQMQTSILQPSPEQFPRYEQQPPAMPECFTQNFVDHLHRTFNGPQLAAIQWAAMHTAAGTGSGTAKRQDPWPFTLVQGPPGTGKTHTVWGMLNVIHLVQYQHYYTSLLKKLAPESYKQGNDSSLDNVMIGSIDEVLQNMDENLFRTLPKLCPKPRMLVCAPSNAATDELLARVLDRGFIDGEMNVYRPDVARVGVDSQTRAAQAVSVERRTEQLLMKSREEILGWMHQLKGREAQLSQQISILQRELNVTAAAVRSQGSVGVDPDVLVARDQNRDSLLQNLAAVVEGRDKILVEMSRLFILESKFRAGSNFNLEEARANLEASFANEAEIVFTTVSSSGRKLFSRLTHGFDMVVIDEAAQASEVAVLPPLSLGAARCVLVGDPQQLPATVISKAAGTLLYSRSLFERFQLAGCPTMLLSVQYRMHPQIRDFPSRYFYQGRLTDSDSVANLPDEAYYKDVLLKPYIFYDITHGRESHRGGSVSYQNIHEAQFCLRLYEHLQKTLKSLGMGKVSVGIITPYKLQLKCLQREFEDVLSTEEGKDLYINTVDAFQGQERDVIIMSCVRASGHGVGFVADIRRMNVALTRARRSLWVMGNATALVQSDDWAALITDAKGRNCYLNMDSLPKDFLVSKGPAYVALPGKISNMRGSRSTGLRHMSLDLHVESRSGTPSEDDEKSNSSVISRNEIHRPLKPPIENSLDEFDQSCDRTRDAWPHGSQKKQSSAGNGGCDRIPNWGLEKCRSEQRNKGDSWGVLGLIFDGMDLASLTKCGESINLRDQVPSSQTMNANLKKSPSNGCENPVSSEEQQQKIYEIRRLLGPLSGKLSVYCSDASILRYLRARNWNVKKAGKMLKESLKWRSQYKPEEIKWEDVAHEAETGKIYRTNYIDKHGRTVLVMRPSRQNSKSIKGQMKYLVYCMENAILNLPSDQEQMVWLIDFQGFNLSNISVKVTRETANVLQDHYPERLGMAILYNPPKFFEPFWTVVKPFLEPKTVNKVKFVYSDDLSSQKVMEDLFEMEKLESAFGGTDPTGFEITKYAERMREDDKRMPAFWTGSSPPLSTSEQAMLSAPLDLDSSSDSSDNDKTDCDPLDKIAPEEDLSPEHDTTVVIGYGGSSGTSSLVL 1759
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25246157 25259103 - BLOR04717 Blo12g00698 67959

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1327 1353 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1691 1713 - -
Blo12g00698 1759 Gene3D - 612 1059 IPR027417 -
Blo12g00698 1759 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 1262 IPR027417 -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 311 389 - -
Blo12g00698 1759 Gene3D - 1406 1703 IPR036865 -
Blo12g00698 1759 Pfam AAA domain 1038 1234 IPR041679 -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1301 1320 - -
Blo12g00698 1759 Gene3D - 1060 1266 IPR027417 -
Blo12g00698 1759 SMART sec14_4 1512 1666 IPR001251 -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 311 335 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1685 1759 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 135 174 - -
Blo12g00698 1759 Coils Coil 864 884 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 538 563 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1301 1368 - -
Blo12g00698 1759 Pfam AAA domain 685 1031 IPR041677 GO:0004386
Blo12g00698 1759 SMART CRAL_TRIO_N_2 1467 1492 IPR011074 -
Blo12g00698 1759 CDD SF1_C_Upf1 1062 1251 IPR041679 -
Blo12g00698 1759 CDD DEXXQc_SETX 679 1061 - -
Blo12g00698 1759 PANTHER DNA2/NAM7 HELICASE FAMILY 1 1334 IPR045055 -
Blo12g00698 1759 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 1506 1669 IPR001251 -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 75 174 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 1714 1740 - -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 374 389 - -
Blo12g00698 1759 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN-RELATED 1 1334 - -
Blo12g00698 1759 CDD SEC14 1514 1664 IPR001251 -
Blo12g00698 1759 SUPERFAMILY CRAL/TRIO domain 1506 1683 IPR036865 -
Blo12g00698 1759 Pfam CRAL/TRIO domain 1514 1663 IPR001251 -
Blo12g00698 1759 MobiDBLite consensus disorder prediction 76 99 - -
Blo12g00698 1759 Pfam CRAL/TRIO, N-terminal domain 1467 1491 IPR011074 -
Blo12g00698 1759 SUPERFAMILY CRAL/TRIO N-terminal domain 1441 1508 IPR036273 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00698 - - K10706 qsu:112038045 2062.73
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00543 Blo-Chr2:9238213 Blo12g00698 Blo-Chr12:25246157 3.66E-20 dispersed
Blo04g00729 Blo-Chr4:6756070 Blo12g00698 Blo-Chr12:25246157 3.64E-17 dispersed
Blo05g00007 Blo-Chr5:66581 Blo12g00698 Blo-Chr12:25246157 5.37E-84 dispersed
Blo06g01032 Blo-Chr6:33647814 Blo12g00698 Blo-Chr12:25246157 1.99E-18 dispersed
Blo07g00215 Blo-Chr7:2718648 Blo12g00698 Blo-Chr12:25246157 5.62E-20 dispersed
Blo11g00872 Blo-Chr11:16910467 Blo12g00698 Blo-Chr12:25246157 4.46E-53 dispersed
Blo12g00698 Blo-Chr12:25246157 Blo16g00041 Blo-Chr16:1815772 2.01E-82 dispersed
Blo19g00160 Blo-Chr19:6420274 Blo12g00698 Blo-Chr12:25246157 2.18E-42 dispersed
Blo11g00042 Blo-Chr11:346172 Blo12g00698 Blo-Chr12:25246157 0 wgd
Blo12g00698 Blo-Chr12:25246157 Blo05g00795 Blo-Chr5:29218156 1.67E-82 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g383 . Blo12g00698 . Bda03g00500 Bpe02g00097 Bpe04g00455 . Bma01g02622 . . Cma01g01416 . . . . Cpe06g00511 . . . . . . . . . . . . . . . Cone4ag1352 Cone7ag1580 . . . Csa04g01843 . . . . . . . . . . Sed06g0283 Cmo01g01466 . . . . Car09g00579 . . Bhi09g02618 Tan01g3970 Cmetu10g0738 . Hepe01g2246 Mch11g0793 . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006505 1 1 2 2 2 0 2 1 1 1 1 1 2 0 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 37
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00698 Blo_Chr12 FPKM 3.027424 4.119218 3.969543 3.605291 3.460782 2.561563 2.723379 3.366701 2.586813 3.386604