Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00700 ATGGCAGGTGCAATGGATCTACATAGTTTTACATCATCTTTATCAGATCCCTATGGAGGTGAACTAATGGAAGCTCTTGGACCTTATATCAAAAGTGCTTCTTCTCCTCCATCTACCTCTTTTTCTTCTTCTTCTTCTTCTTCTTTTTCATCTCTTCCTCAGAACTATTTCTCTTTCTCTCCTTCCCTCCCCTCGATGGACCTTTTCGTTGCAAATGGTTGCTCTGGGTCGACGAACTCTGTAGTTTTAGACGAGTTCTCAACCCAACCTTTTACTAATTTGGAGCAGCCATGGCCAATTGGCCTAAACCAACTTACCCCATCTCAGATCCAGCAGATCCAAGCTCAGATCCAGCAGAATTACTCTCCAGATCTGGATTTCGAACCGACCCACCAGCACATCTACCCCAGTAATAGTAAGCTGAAGTTCCTTGGTCCAAAACCCATTGAAATGAAGCAAGTGGGTTCCCCAATAAAGCCGACGAAGCTTTACAGAGGAGTTAGACAGAGGCACTGGGGGAAATGGGTAGCCGAGATTCGTCTCCCGAAGAATCGAACTCGGCTATGGCTTGGCACCTTCGATACGGCAGTAGAAGCCGCGTTAGCTTACGACCAAGCTGCTTACAAGCTCAGAGGGGATTTGGCTAGGCTTAATTTTCCAAATCTGAAGCACAAAAGTGAATTAGGCGAGTATAAGCCTCTCCATTCCACCATTGATGCGAAGCTCCAAGCAATTTGCCAAAGCTTGGCTGAATCGCAGAAACAGGGGAAAACAGAGAAGCCTCGCACTGCCAGAAAAGCACAAAAGATCAAAGCGCAGCCATCGGTGGACGAAGTGCATTCGAAAGAAACAGAGATCAACAATCAGGTGGGAAACTCCCTGTCGCCGGCGATTACAGACAGCGACGGGTCAGCAGGATCTTCACCTTTGTCAGATCTGACGTTTCCGGACGTAACAGAGTCACCCTTGGAGGAGTTTTGGGAGAATTTCGCGTTGCAGAAATACCCTTCTGAGATTGATTGGGCGAGCATTCTACCTTCCTAG 1044 47.32 MAGAMDLHSFTSSLSDPYGGELMEALGPYIKSASSPPSTSFSSSSSSSFSSLPQNYFSFSPSLPSMDLFVANGCSGSTNSVVLDEFSTQPFTNLEQPWPIGLNQLTPSQIQQIQAQIQQNYSPDLDFEPTHQHIYPSNSKLKFLGPKPIEMKQVGSPIKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAVEAALAYDQAAYKLRGDLARLNFPNLKHKSELGEYKPLHSTIDAKLQAICQSLAESQKQGKTEKPRTARKAQKIKAQPSVDEVHSKETEINNQVGNSLSPAITDSDGSAGSSPLSDLTFPDVTESPLEEFWENFALQKYPSEIDWASILPS 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25285115 25286158 + BLOR04719 Blo12g00700 67961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00700 347 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 1 344 - -
Blo12g00700 347 PRINTS Ethylene responsive element binding protein signature 186 202 IPR001471 GO:0003700|GO:0006355
Blo12g00700 347 PRINTS Ethylene responsive element binding protein signature 164 175 IPR001471 GO:0003700|GO:0006355
Blo12g00700 347 SUPERFAMILY DNA-binding domain 163 220 IPR016177 GO:0003677
Blo12g00700 347 MobiDBLite consensus disorder prediction 251 316 - -
Blo12g00700 347 MobiDBLite consensus disorder prediction 255 284 - -
Blo12g00700 347 MobiDBLite consensus disorder prediction 285 315 - -
Blo12g00700 347 Pfam AP2 domain 164 212 IPR001471 GO:0003700|GO:0006355
Blo12g00700 347 Gene3D AP2/ERF domain 163 221 IPR036955 GO:0003700|GO:0006355
Blo12g00700 347 SMART rav1_2 163 226 IPR001471 GO:0003700|GO:0006355
Blo12g00700 347 CDD AP2 162 222 IPR001471 GO:0003700|GO:0006355
Blo12g00700 347 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 1 344 - -
Blo12g00700 347 ProSiteProfiles AP2/ERF domain profile. 163 220 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo12g00700 Blo17g00125 CCT
Blo12g00700 Blo18g00138 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00700 Blo-Chr12:25285115 Blo13g00374 Blo-Chr13:21625464 5.99E-30 dispersed
Blo17g00769 Blo-Chr17:24518640 Blo12g00700 Blo-Chr12:25285115 2.63E-25 dispersed
Blo02g01147 Blo-Chr2:42962264 Blo12g00700 Blo-Chr12:25285115 6.34E-19 transposed
Blo03g00321 Blo-Chr3:6768191 Blo12g00700 Blo-Chr12:25285115 2.19E-08 transposed
Blo06g00091 Blo-Chr6:3580672 Blo12g00700 Blo-Chr12:25285115 3.20E-63 transposed
Blo11g00041 Blo-Chr11:335156 Blo12g00700 Blo-Chr12:25285115 0 wgd
Blo12g00700 Blo-Chr12:25285115 Blo17g00125 Blo-Chr17:1158138 1.67E-65 wgd
Blo12g00700 Blo-Chr12:25285115 Blo18g00138 Blo-Chr18:1285485 7.68E-77 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13038 PF00847 AP2 3.70E-14 CL0081 Blo TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00700 K09286 - mnt:21404406 327.791