Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00727 ATGGCCTCAAACTCGGGCATTTGCCCGTCTACCACGGTTCTCAAGCACAAAATGCTTCTCAAAAGAGCTAGTATTCCATCGGTCTCGTTTCGTTCTACAGTTGTCGACGGGAGTTTTGGTCGGCGCCTGGATCGGTCTACGATCAGGGCGATATCGGCTGATTTTTCGAGCACTGATGGACATTTGACAGAGCAGAAAAAGGGGTTGGAGAAAGACTCTCGATTGCTGTGGCAGAGGTACGTTGACTGGCTGTATCAGCATAAAGAGCTCGGGTTGTTTCTGGATGTTAGTAGGATCGGGTTCACGGATGAGTTCGTGAGGCAGATGGAGCCCCGTTTCCAGGCCGCTTTCCGAGCTATGGCGGAGCTCGAGAAAGGAGCGATCGCTAATCCCGATGAGGGTCGCATGGTTGGGCATTATTGGCTCAGAAACTCTAATCTTGCGCCTAACTCGTTCTTGAGTTTGCAAATAAAGAATTCTCTGGAAGCTTTGTGCAAGTTTGCAGACGATGTCATTAGTGGTAAGATCAAGCCACCATCAAAAGGTCGCTTTACTCGCATACTTTCTGTTGGGATTGGAGGATCAGCCCTTGGTCCACAGTTCGTTGCCGAGGCATTAGCTCCTGATAATCCTCCTCTTGAGATAAGATTCATTGACAACACTGATCCAGCAGGAATTGATCATCAGATTTCCCAGCTTGGACCAGAGTTGGGTTCTACCCTTGTAATAGTCATTTCAAAGAGTGGAGGTACTCCTGAAACTAGAAATGGTTTGTTGGAAGTTCAGAAAGCTTTTCGTGAAGCTGGGCTGGATTTTGCAAAACAGCAGGGTGTTGCTGTTACACAAGAAAATTCATTGTTGGACAATACTGCAAAACTCGAAGGCTGGTTAGCTAGGTTTCCCATGTTTGATTGGGTGGGTGGTAGAACATCTGAAATGTCGGCTGTTGGTCTTCTTCCTGCTGCACTTCAGGGAATCGACATTAGGGAAATGCTTGCTGGTGCAACGTTGATGGATGAGGCAACTAGAACAACAGCTATTGAAAATAATCCTGCAGCATTACTAGCATTATGCTGGTATTGGGCATCTGATGGCGTAGGATCCAAGGATATGGTTGTCCTTCCGTACAAGGACAGCTTATTGTTGTTTAGTCGCTATTTGCAACAGTTAGTTATGGAATCGCTTGGGAAAGAGTTTGACCTTGATGGAAATCGGGATTTCTATGAGTGGATATTGGGCGAAGAACTAGAGATGAACTTGGAGGAATTGAAATATGCTCTGGGTCAACGGTTTGGTCCCAAGGAATGGAAATCTGCACAAGAGCAGGTGAATCAAGGACTTACTGTCTACGGAAACAAAGGGAGCACAGATCAGCATGCCTATATTCAACAATTGAGAGAAGGCGTGCACAACTTTTTTGTAACCTTCATTGAAGTACTACGTGATAGGCCTCCTGGGCATGATTGGGAGCTAGAGCCAGGTGTCACTTGTGGGGATTACCTGTTTGGCATGTTACAGGGAACAAGATCAGCTCTTTATGCAAATGATCGGGAGTCCATTACAGTCACTGTTCAAGAAGTCACTCCTAGATCTGTTGGTGCTCTTATTGCTCTTTATGAAAGAGCGGTTGGTTTATATGCGTCTCTCATCAACATTAATGCATACCATCAACCCGGAGTGGAAGCAGGGAAAAAAGCAGCTGGAGAAGTATTAGCCCTTCAAAAGCGAGTTTTGGCAGTACTTAACGAGGCTAGCTGTAAAAACCCTATTGAACCATTGACACTCGATGAAGTAGCTGATCGTTGCCACGCCACCGTAGATATCGAAATGATTTACAAGATTATTGTTCACATGGCCGCCAATGATAGAGCTATAATAGCCGAAGGTAGCTGTGGCTCACCACGAAGCATCAAGAATGAACCCTCTTATTCCAGTTCAAATCTGAGACCTCGAGCGGATCCGTTCACCGCCATTCGAACTGGTAATGGAGGGAGGGGCTTTGGATTGCCTCCACCGTCAAAATTTAGAAGTGGGCACCTGCCTGCAAATGCCCTTCCAGTTTCTAAAAATATTAATGGCGATATGAACGAAAGTGGGTCTGGTTCCGAAATGGACATGACAACTGATTCTGAGGAGGACGTTTATGGGGGTAGGTATTCGCTGGACTCGTCCCCTCAAGATCAAAGATTTCAAAATGTTAGACATGGAAACTCTACTCAAAATCGACCACATTATGGAAGTGATTGCTTATACTCTGATGTCAGTTCATCAAGAGAAACATTAGTGAGCGGCTATGGAAGTGTAGCACAACAATTTGTTGGCAAAAATGGAAGGTACCCTATTCGGCAAAATGGTTTTACAGAAGAAGAATCATCGGATTCTGCTTCTAGCTCAGAATTTTCTACTACACAAGTGGGGAGTATTAATGGGTCTGTGCCTCAGAATAGAGCTTCTTTGGTTTCTGAAGGATATGCATCGAGCGTGCCATCTCACATGAAAGCAAAAAGTGCTGCTGAAAAGGATTTTCACACAAGAAACCTACAGAATGGAAAGGTTTCTGATGACGATGATAATGAAGAAGATGATGTTCCTAGTGCTCCTCCATTTGGTGGTCCAGCTCAGGAAATTAAACAAAATGGTGAAAAAATTCAAGCATCTAAAGAACAAATCACCCCTCGTTGCATAGATACACAAGAACCAAAAGTTGTATCTAAAGTGAAACCACAGAGTATTGCAAGCAAAATTTCTGATCAATCTGTTAGAATGACTAGTTCAGAAGCTGCTGCATCTTCTGGTTCGGGTCGTGTTCCAACATTTCATGCTAGTGCTCTTGGACCCTGGCATGCTGTTGTAGCTTATGATGCATGTGTGCGACTTTGCCTTCATGCTTGGGCAATGGAAAACATGGAAGCCCCAATGTTTTTGGAAAATGAATGTGCTGTACTACGGGATGCCTTTGGTTTGCGCCAAGTGCTTTTACAATCAGAGGAAGAACTATTGGTGAAACGGACATCAGAATTTGTTAGCGAAGGAGTGGCCCCAAAACCAAAGAAAGTTATTGGCAAGATGAAGGTGCAAGTACGCAAGGTGAAGATGGCACTGGATCCACCAACTGGCTGTAGTATTTTGGCTCTAAGACCACCAGCAGTTACCTTAAACTCAATTAAGTATAGGTTTTCAAGTTGGCAGTCAACAGTAGCTTCTGGATGGCATGCTTTTAGAAAAATCCGCCTTGCACCTCGTATGCCAACAAACAGGTCATTGTCGAGGCAGAGCTTGGCATACATGCAGGCAAGCACCCAATATATAAAACAAGTATCTGGTCTTCTGAAAGCTGGCGTAACAACATTACGCAACAGTTCATCATCATATGAAGTAGTGCAAGAAACTTACGCTTGTTTGCTAAGAATGAAAAGTTCAACCAAGGAAGATGGCATCACAATGCAAGCAGGATCTGGGGAAACTCATGTTTTCTTTCCAGACGGCCTTGGGGATGATTTAATAATTGAAATCCAGGATTCGAATGGGAAGCATTTTGGCCGTGTCGTTGCTCAGGTCGCTGCAATTGCTGAGAATCCGGCTGACAAGTTACGGTGGTGGTCTGTTTATCATGAGCCAGAACATGAACTTGTGGGAAAGATACAACTTTATATACATTATTCAGCAAGTTCAGATGATAATAACCATCTTAAGTGTGGCTCTGTTGCTGAAACAGTTGCCTATGACCTGGTTCTGGAAGTTGCGATGAAGGTTCAACATTTTCAACAAAGGAACCTGTTATTGCATGGCTCATGGAAATGGCTATTGCTAGAATTTGCATCGTATTATGGTATTTCTGAAGTATACACCAAGTTGAGATATTTGTCATATGTGATGGATGTGGCCACACCTACTGCTGATTGCCTTGACCTGGTATATGAGTTGCTCATGCCTGTTGTTATGAAGGGGCATAACAAAACCACATTAAGTCATCAAGAGAACCGAATTTTAGGAGAAACCAAGGATCAGTTAGAGCAGATACTCTCACTGGTTTTTGAAAATTACAAATCACTTGATGAAACATCTCTCTCGGGTATTATGGAAGTATACAGACCTGCGACTGGGATTGTGGCACCTGCTCTAAAACCAGCTGTTAAACTATATACACTTCTTCATGATATCTTGTCTCCTGAAGCTCAGACTTCCTTATGCCACTATTTCCAGGTTGCTGTAAAAAAAAGATCAAGGAGACATTTGGCCGAGACCGATGAATATGTTGCTTGCAACAATGAGGGTAGTTTGGTCGATACTGTTACTATGGTTACTGCATACCAAAAGATGAAATCAGTGTGTGTAAATATTAGAGATGAAATTTTTACTGACATTGAGATACACAATCAACATATACTCCCCAGCTTTATAGACCTTCCAAGTCTATCTTCGTCAATTTTCAGCACAGAACTTTATAGTAGATTGCGTGCTTTCCTCATTGCTTGCCCCCCAACAGGGCCTTCACCCCATGTAGCAGAACTTGTTATTGCAACTGCAGATTTTCAAAGAGATCTTGCGAGCTGGGGTATTAGTCCTGTCAAAGGTGGTGTTGATGCAAAAGAACTATTCCATTTGTATATTCTTGTGTGGATTCAGGATAAACGTCTTTCATTGCTGGAATCATGCAGATTAGACAAGGTAAAATGGTCAGGAGTTAAGACACAACATTCTACAACTCCTTTTGTTGATGAAATGTATGACCGACTAAAAGAGACTTTGAGTGACTACGAGATTATTATTTGCCGATGGCCCGAATATACTTTTGTTCTAGAACAAGCTGTTGCAGATGTTGAGAAAGCTACAGTGGAAGCTTTGGACCGGCAGTATGCTGATGTATTGGCACCATTGAAAGAAAATTTAACCCATAAAAAATTTGGACTCAAATATGTCCAAAAACTTGCCAAAAGAAACGTGTGTGCTTATGCAGTACCGGACGAGTTGGGAGTTCTGTTGAATTCTATGAAGAGGATGCTTGATGTCCTCCGGCCCAAGATAGAAACTCAATTCAAGTCATGGGGATATAGCATTCCTGAAGGTGGAAATGCACTTCCAGGGGAGCGCCTCACCGAAGTAACAGTCATGCTCAGAGCCAAATTTAGAAACTATGTTCAAGCTGTTGTTGAAAAGCTTGCAGAAAACACAAAATTACAAAGTTCGACGAAGCTGAAAAAGATCCTTCAAGATTCAAAGGATACTGTGGTAGAATCAGACATGCGAAGTAGAATGCAGCCATTGAAAGAACAGTTGACGAATACAATAAATCATCTTCATACATTATTTGAGAATCTCGTCTTCATAGCAATTTGTCGAGGTTATTGGGACCGAATTGGACGGGATGTTCTTGGCTTCTTGGAGAATCGAAAAGAGAACCGTTCATGGTACAAAGGTTGCCGTGTTGCGGTTTCGATCCTGGACGATACATTTGCATCGCAAATGCAACAACTTATGGGAAATTCTCTACAAGAGAAAGATGTAGAGCCACCCACTTCGATCATGGAAGTTCGATCGATGCTATGCAAGGATGCTTCGAGTCACAAGGACAATTCGTATTACTTCTAA 5589 43.07 MASNSGICPSTTVLKHKMLLKRASIPSVSFRSTVVDGSFGRRLDRSTIRAISADFSSTDGHLTEQKKGLEKDSRLLWQRYVDWLYQHKELGLFLDVSRIGFTDEFVRQMEPRFQAAFRAMAELEKGAIANPDEGRMVGHYWLRNSNLAPNSFLSLQIKNSLEALCKFADDVISGKIKPPSKGRFTRILSVGIGGSALGPQFVAEALAPDNPPLEIRFIDNTDPAGIDHQISQLGPELGSTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFAKQQGVAVTQENSLLDNTAKLEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGATLMDEATRTTAIENNPAALLALCWYWASDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRDFYEWILGEELEMNLEELKYALGQRFGPKEWKSAQEQVNQGLTVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANDRESITVTVQEVTPRSVGALIALYERAVGLYASLININAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKNPIEPLTLDEVADRCHATVDIEMIYKIIVHMAANDRAIIAEGSCGSPRSIKNEPSYSSSNLRPRADPFTAIRTGNGGRGFGLPPPSKFRSGHLPANALPVSKNINGDMNESGSGSEMDMTTDSEEDVYGGRYSLDSSPQDQRFQNVRHGNSTQNRPHYGSDCLYSDVSSSRETLVSGYGSVAQQFVGKNGRYPIRQNGFTEEESSDSASSSEFSTTQVGSINGSVPQNRASLVSEGYASSVPSHMKAKSAAEKDFHTRNLQNGKVSDDDDNEEDDVPSAPPFGGPAQEIKQNGEKIQASKEQITPRCIDTQEPKVVSKVKPQSIASKISDQSVRMTSSEAAASSGSGRVPTFHASALGPWHAVVAYDACVRLCLHAWAMENMEAPMFLENECAVLRDAFGLRQVLLQSEEELLVKRTSEFVSEGVAPKPKKVIGKMKVQVRKVKMALDPPTGCSILALRPPAVTLNSIKYRFSSWQSTVASGWHAFRKIRLAPRMPTNRSLSRQSLAYMQASTQYIKQVSGLLKAGVTTLRNSSSSYEVVQETYACLLRMKSSTKEDGITMQAGSGETHVFFPDGLGDDLIIEIQDSNGKHFGRVVAQVAAIAENPADKLRWWSVYHEPEHELVGKIQLYIHYSASSDDNNHLKCGSVAETVAYDLVLEVAMKVQHFQQRNLLLHGSWKWLLLEFASYYGISEVYTKLRYLSYVMDVATPTADCLDLVYELLMPVVMKGHNKTTLSHQENRILGETKDQLEQILSLVFENYKSLDETSLSGIMEVYRPATGIVAPALKPAVKLYTLLHDILSPEAQTSLCHYFQVAVKKRSRRHLAETDEYVACNNEGSLVDTVTMVTAYQKMKSVCVNIRDEIFTDIEIHNQHILPSFIDLPSLSSSIFSTELYSRLRAFLIACPPTGPSPHVAELVIATADFQRDLASWGISPVKGGVDAKELFHLYILVWIQDKRLSLLESCRLDKVKWSGVKTQHSTTPFVDEMYDRLKETLSDYEIIICRWPEYTFVLEQAVADVEKATVEALDRQYADVLAPLKENLTHKKFGLKYVQKLAKRNVCAYAVPDELGVLLNSMKRMLDVLRPKIETQFKSWGYSIPEGGNALPGERLTEVTVMLRAKFRNYVQAVVEKLAENTKLQSSTKLKKILQDSKDTVVESDMRSRMQPLKEQLTNTINHLHTLFENLVFIAICRGYWDRIGRDVLGFLENRKENRSWYKGCRVAVSILDDTFASQMQQLMGNSLQEKDVEPPTSIMEVRSMLCKDASSHKDNSYYF 1862
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25595767 25616948 + BLOR04746 Blo12g00727 67988

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00727 1862 MobiDBLite consensus disorder prediction 785 814 - -
Blo12g00727 1862 PANTHER - 639 1862 - -
Blo12g00727 1862 MobiDBLite consensus disorder prediction 721 748 - -
Blo12g00727 1862 Hamap Glucose-6-phosphate isomerase [pgi]. 48 574 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 MobiDBLite consensus disorder prediction 636 748 - -
Blo12g00727 1862 SUPERFAMILY SIS domain 117 572 IPR046348 GO:0097367|GO:1901135
Blo12g00727 1862 Gene3D - 139 324 - -
Blo12g00727 1862 Gene3D - 325 556 - -
Blo12g00727 1862 CDD SIS_PGI_1 158 323 IPR035476 -
Blo12g00727 1862 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 75 580 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 MobiDBLite consensus disorder prediction 879 893 - -
Blo12g00727 1862 MobiDBLite consensus disorder prediction 689 705 - -
Blo12g00727 1862 MobiDBLite consensus disorder prediction 834 853 - -
Blo12g00727 1862 PRINTS Glucose-6-phosphate isomerase signature 300 318 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 PRINTS Glucose-6-phosphate isomerase signature 187 206 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 PRINTS Glucose-6-phosphate isomerase signature 533 547 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 PRINTS Glucose-6-phosphate isomerase signature 376 397 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 PRINTS Glucose-6-phosphate isomerase signature 547 560 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 MobiDBLite consensus disorder prediction 830 935 - -
Blo12g00727 1862 MobiDBLite consensus disorder prediction 636 651 - -
Blo12g00727 1862 MobiDBLite consensus disorder prediction 778 814 - -
Blo12g00727 1862 Pfam Phosphoglucose isomerase 513 572 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 Pfam Phosphoglucose isomerase 122 405 IPR001672 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 ProSitePatterns Phosphoglucose isomerase signature 2. 547 564 IPR018189 GO:0004347|GO:0006094|GO:0006096
Blo12g00727 1862 MobiDBLite consensus disorder prediction 909 935 - -
Blo12g00727 1862 PANTHER PESTICIDAL CRYSTAL CRY8BA PROTEIN 639 1862 - -
Blo12g00727 1862 CDD SIS_PGI_2 369 570 IPR035482 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00727 - - - qsu:112005165 1839.7
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00727 Blo-Chr12:25595767 Blo15g00405 Blo-Chr15:5772743 0 dispersed
Blo01g01559 Blo-Chr1:55358803 Blo12g00727 Blo-Chr12:25595767 1.97E-26 transposed
Blo18g00100 Blo-Chr18:883992 Blo12g00727 Blo-Chr12:25595767 0 transposed
Blo11g00014 Blo-Chr11:124114 Blo12g00727 Blo-Chr12:25595767 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g490 . Blo12g00727 . . Bpe02g00136 . Bma04g00435 Bma01g02589 . . Cma01g01639 Cma09g00589 . . . Cpe06g00450 . . . . . . . . . . . . . . . . Cone9ag1452 . . Lsi04g02273 Csa03g04484 Chy04g00216 . . . Bda11g00795 . . . . . Sed01g0609 Cmo01g01687 Cmo09g00575 . . . Car09g00520 . . Bhi09g02488 Tan01g3841 Cmetu04g2748 . Hepe01g2163 Mch11g0702 . Cla11g01416 Cam11g1473 Cec11g1503 Cco11g1498 Clacu11g1634 Cmu11g1452 Cre11g1870 . . . Cme04g00244
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004017 1 1 2 2 1 0 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 4 1 39
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00727 Blo_Chr12 FPKM 2.338046 2.491922 4.556948 5.628213 4.512685 4.753634 4.728833 8.341169 7.545113 8.234786