Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00730 ATGCAGCGAGATTATGCAGAGCCCGAGGGCGAACACAACGCCATGTTCTCCAAGCTTCATAATTCTCAATCTCCGTCCTTCGCTCCCTTTTCTCATCCCTTTCAACTCTCTGCAAGAAAATGTCAGAACCCAGAAGAAGAAGCCGAACGACCAAGCCTCGCCACTCCTACACCGTCCAAGAAGCCCGCCGAGCCAAGCTCTGGCGACGGCGCTACCATTGAAGTCCTCAAACGACCCAGGGGTCGCCCTCCTGGCTCAAAGAACAAACCCAAACCGGCTGCTGTTGTTGCTCGCGATCCAGAGCCTTCGATGAGCTCTTATATTCTTGAAGTTAGTGGGGGCAACGATGTCATCGGAGCCATTGCCGGCTTTTGTTGCCGAAAAAACATAGGGCTTACAGTTCTCAGCGGCTCGGGCAGTGTTTCGGATGTCACTATTCGGCCCTCTGCGGGAGCGCCAATAATTTTTCGTGGTCGGTTTGATATCGTCTCCATCAGCGCAACTTTTCTCCCTAATTCGACCCCCTTTTCGGTTCCCAATGGCTTCGTTATCTATCTGGCTGGTACTCACGGCCATATCTTCGGCGGTTTAGTCTGCGGAGAATTGATCGCCCATGGAACGGTGTTTGTGATAGCTTCCTCGTTCAACAATCCGTCTTATCACCGACTCCCGGGCGAAGACGTGGCAGGAAACTCGGCCGATGCAAGCGGCGGCGAGAAAAACTCTTCTCCAGGCTCCGGTGCCGGAGATAGTGGCGGTCAGGCTTCGGCGCAATCGTGCGGCATGCCTATGTATGGCAGTTACGTTTCCTCCGATGTAGTTTGGGTACCCACCGCAAGACCACCATTCAACGGCGATACTAGCCGATAA 870 53.91 MQRDYAEPEGEHNAMFSKLHNSQSPSFAPFSHPFQLSARKCQNPEEEAERPSLATPTPSKKPAEPSSGDGATIEVLKRPRGRPPGSKNKPKPAAVVARDPEPSMSSYILEVSGGNDVIGAIAGFCCRKNIGLTVLSGSGSVSDVTIRPSAGAPIIFRGRFDIVSISATFLPNSTPFSVPNGFVIYLAGTHGHIFGGLVCGELIAHGTVFVIASSFNNPSYHRLPGEDVAGNSADASGGEKNSSPGSGAGDSGGQASAQSCGMPMYGSYVSSDVVWVPTARPPFNGDTSR 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25644970 25645839 - BLOR04749 Blo12g00730 67991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00730 289 MobiDBLite consensus disorder prediction 16 31 - -
Blo12g00730 289 MobiDBLite consensus disorder prediction 1 99 - -
Blo12g00730 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 31 281 IPR014476 GO:0003680
Blo12g00730 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 31 281 - -
Blo12g00730 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 217 IPR005175 -
Blo12g00730 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 227 - -
Blo12g00730 289 MobiDBLite consensus disorder prediction 235 258 - -
Blo12g00730 289 MobiDBLite consensus disorder prediction 226 258 - -
Blo12g00730 289 ProSiteProfiles PPC domain profile profile. 101 236 IPR005175 -
Blo12g00730 289 CDD DUF296 107 213 IPR005175 -
Blo12g00730 289 Gene3D - 104 236 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00730 Blo-Chr12:25644970 Blo04g00266 Blo-Chr4:2021023 7.92E-40 dispersed
Blo11g00012 Blo-Chr11:111911 Blo12g00730 Blo-Chr12:25644970 6.65E-113 wgd
Blo12g00730 Blo-Chr12:25644970 Blo17g00096 Blo-Chr17:747745 1.24E-101 wgd
Blo12g00730 Blo-Chr12:25644970 Blo18g00103 Blo-Chr18:928542 5.72E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00730 - - fve:101293300 284.648