Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00735 ATGCCGCATAGAACTACTTACTTCTTTCCCAGGCAATTTCCTGATCACGGATTGGAACCTGCTTCAACTTCTAAACAGAAATTAGACCACGAGACGCATGTTAAAAATTATACGCGTGGCGTCGAAAGCGACTCGAAGGCGATCCCGCGGCTCCCCCGCGAAATAACGGTCACGAAGACTTCTGCTTTGTCAAATATTTTCACGGGGTACAAGAAAGTGCCACGATCTTCATCTACTCACGTGAAAACCTGGCTTTCAAACTGCGACGATGGACGGGAGATGCTTCTGTCACCGACGTTGGAGACGGAGACGGAGACGGTGGCGGAGGCGGAGTCCGTATCGGAGCCGGTGTTGGCTAAAGTTAGGAATGATGACCACAGCTTTGAGCGGCAGGTTTCATTGCCCAGGCTATCAAGTGGGAGTAGTTATGCTGGAAGTTTTTTGTCCGACGCTGGAATGGAGACGATGGATGGAAATTTGTCCCGAAATGTTAAGGATTCAAGGGGATCGAATATTTCGTCTCTTTTACCTATTGAGAAACGGGAGGTGGTGGTGCAGGAGGAGCGTAGGGAAAACTTGTCACAGAAAATCAAAGAAAGTTACTATCTACAACTTACTTTGGCAAAAAGGCTCACTTTCCAGGCAAATATTTGTAGTGAGCCCCTTTTTATAGAAAAGAATAGAGAGGAGGTTACGGATGCTGAAACTGTTTCTTATCGACTTTGGGTGAGTGGTTGCTTGTCTTACTCTGACAAGATATCAGATGGGTTCTACAACATTTTAGGCATGAATCCATATCTCTGGCTGATGTGCAGTGATGTTGAGGAAGGTAGGCGACTGCCTCCTCTTATGTCGCTTAAAGCAGTTGAACCTAGTGAGACTTCAATGGAGGTGGTCCTTGTCGATAAGCAGGGGGACTCACGCCTTAAAGAGCTCGAAGATAAAGCACAACAGTTATATTGTTCTTCAGATAACACCATGGTGTTCATAGAAAATTTGGGAAAACTCGTTGCCGTCTATATGGGCGGAACTTTTCCAATGGAGCAAGGAGATCTTCAGTTGCACTGGAAAGTAGTGAGTAAGAGATTGAGGGATATTCAGAATTGCGTAGTGCTTCCCCTGGGCAGTTTATCTATGGGACTATGCAGGCATCGTGCAATCCTTTTTAAGAAACTAGCAGATTATATTGGTTTGCCATGTCGCATTGCTCGAGGTTGCAAGTACTGTTCAGCAGATCATCAGTCTTCTTGCTTAGTTAAAATTGAGGATGACAGAAAGTTTTTTAGCAGGGAATATGTAGTTGACCTTGTTGGCAAACCAGGACATATACATGGGCCAGATTCTTCAATTAATGGGTGTGCGTCTTCAGTGCCTTCACCTTATCAAGTTTCTCATCTAAAAGAATTCCAACAACCTTACGTGGTCTCTCCTTTTCCATTTATGAACTCAGATTCTGCAGCTCAACAAATTTTTCCATATTCAGGGTCTGGAGAAGATGGTTACCAGATGAAGGAAAGTTGCTCATTTGAAGAATCAGTTGATCAATCTTGTATAGGAATGCAATTATCTCCTATATGTTTTGATATGAAAGCCACTGCTGGGCATTGTTTGGATCAGTGTCCAGAGTCGCAGTTTTCTGAGGAAAATGTTGCTGAATTACCGGGTGCTGCCAGTGGGGTATTTTTACATGAAAAGTGTTCGAGGCCAATAGAAAACAAAGTTGCACCAGCATACGGAAAAGAAAGAGTCACGTTAGGAAATATATCAACAGATGACAGTATTAAACAACCTACACTAAGTGTAGTCAGTCTATCCGATCCGAAGAAGATCAAAAGTAATTCTGTAGACCAAGGTAGATTTCCTGCTCCAACTAACGCAAGATATTTAAATCTTGAACCATCTCTCGCGATGGATTGGCTTGAGATCTCGTGGGATGATTTGCATATCAAAGAGCGTGTTGGAGCTGGTTCGTTCGGTACAGTGCATCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCAGGATGATCAGTTGAAGGAGTTTTTAAGAGAGCTCATGATTCAACTCTTTCAGGTAGCAATAATGAAGCGAGTTCGCCATCCAAATGTGGTTCTCTTTATGGGTGCAGTAACCAAGCGTCCTCATCTGTCGATAGTGACTGAATATCTGCCGAGGGGTAGTCTATATCGCCTGATCCATAGACCAGCTTCTAGTGAAATACTGGACCAGAGGAGACGGTTGCGCATGGCATTGGATGTGGCCAAGGGAATCAATTATCTACACTCCCTTTGTCCTCCTATAGTTCATTGGGATCTTAAATCTCCAAATTTGTTGGTAGACAAAAATTGGACTGTGAAGGTATGTGATTTTGGCTTGTCCAGATTCAAAGCAAACACTTTTATATCGTCAAAGTCCGTAGCTGGAACACCCGAGTGGATGGCTCCCGAATTCCTTCGGGGTGAGCCCTCAAATGAAAAATCTGATGTATACAGTTTCGGTGTGATTCTTTGGGAGCTTGTTACGATGCAGCAACCCTGGAATGGACTCGGTCCTGCACAAGTTGTTGGAGCTGTGGCTTTTCAAAATAGAAGACTGACTATCCCCCAAGGCACTTCCCCGTTGTTAGCTTCACTTATCGAAACTTGCTGGGCTGATGATCCTATTCAACGCCCGTCTTTCAGAAGCATAGTGGACTCACTAAAGAAGCTACTCAAGTCTCCGCAGCAGTTGATAGCGATGGGAGGGACGTAG 2775 44.4 MPHRTTYFFPRQFPDHGLEPASTSKQKLDHETHVKNYTRGVESDSKAIPRLPREITVTKTSALSNIFTGYKKVPRSSSTHVKTWLSNCDDGREMLLSPTLETETETVAEAESVSEPVLAKVRNDDHSFERQVSLPRLSSGSSYAGSFLSDAGMETMDGNLSRNVKDSRGSNISSLLPIEKREVVVQEERRENLSQKIKESYYLQLTLAKRLTFQANICSEPLFIEKNREEVTDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWLMCSDVEEGRRLPPLMSLKAVEPSETSMEVVLVDKQGDSRLKELEDKAQQLYCSSDNTMVFIENLGKLVAVYMGGTFPMEQGDLQLHWKVVSKRLRDIQNCVVLPLGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCSADHQSSCLVKIEDDRKFFSREYVVDLVGKPGHIHGPDSSINGCASSVPSPYQVSHLKEFQQPYVVSPFPFMNSDSAAQQIFPYSGSGEDGYQMKESCSFEESVDQSCIGMQLSPICFDMKATAGHCLDQCPESQFSEENVAELPGAASGVFLHEKCSRPIENKVAPAYGKERVTLGNISTDDSIKQPTLSVVSLSDPKKIKSNSVDQGRFPAPTNARYLNLEPSLAMDWLEISWDDLHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFQDDQLKEFLRELMIQLFQVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASSEILDQRRRLRMALDVAKGINYLHSLCPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWNGLGPAQVVGAVAFQNRRLTIPQGTSPLLASLIETCWADDPIQRPSFRSIVDSLKKLLKSPQQLIAMGGT 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25676435 25684527 - BLOR04754 Blo12g00735 67996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00735 924 CDD STKc_MAP3K-like 653 908 - -
Blo12g00735 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Blo12g00735 924 ProSiteProfiles Protein kinase domain profile. 647 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00735 924 SMART serkin_6 647 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00735 924 Gene3D Transferase(Phosphotransferase) domain 1 733 920 - -
Blo12g00735 924 Pfam Protein tyrosine and serine/threonine kinase 647 908 IPR001245 GO:0004672|GO:0006468
Blo12g00735 924 Gene3D Phosphorylase Kinase; domain 1 640 731 - -
Blo12g00735 924 SUPERFAMILY Protein kinase-like (PK-like) 626 907 IPR011009 -
Blo12g00735 924 ProSitePatterns Protein kinases ATP-binding region signature. 653 674 IPR017441 GO:0005524
Blo12g00735 924 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 123 922 - -
Blo12g00735 924 Pfam Ethylene-responsive protein kinase Le-CTR1 234 443 - -
Blo12g00735 924 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 123 922 - -
Blo12g00735 924 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Blo12g00735 924 PRINTS Tyrosine kinase catalytic domain signature 728 741 IPR001245 GO:0004672|GO:0006468
Blo12g00735 924 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Blo12g00735 924 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00735 Blo-Chr12:25676435 Blo09g00517 Blo-Chr9:16385929 2.86E-64 dispersed
Blo11g00007 Blo-Chr11:71159 Blo12g00735 Blo-Chr12:25676435 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84590 PF07714 PK_Tyr_Ser-Thr 1.30E-60 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00735 - - csv:101204522 1187.94