Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00764 ATGGGTGGCATTTGCTCGAGGGCGAGAAGACCTGATGCAAATGGAGATAATGGTTCTGGAGGAAGCTTTGGTCATGCCAATGGGCACTCTGATAATTGTCATGTTGTGGTTTATCCGTCTCATGGACCGACATCAAAAGTAACTAATAGTTCTGTTCCATCCTTAGTTGGTGATAGTTTGACCAAAGAATTGCAAGAGCCATTTTCGTTTCCAGCGACAAATGTTGATTCTCATGGCCTGAGTGTAGATATAGTTAATGATGGGATTCCTAGCTTGTCAAGGGCATTATCGCAAAAATCTAGATCAACCAAGTCTAGAGCTGTTTCCGTGGGAAAGGTTTCAGAAGTAGGTTCTCTACTTAACAGAGCCAGTACTGCTGGGTTTGGGAAGGCAGTTGAAGTCTTAGATACACTTGGTAGTAGTGTGACGAGTTTGAACATTAGCAGTGGTTTTACATTGGGGGTTAATACGAAGGGAAATAAAATTTCTATTTTGGCATTTGAAGTTGCCAACACAATTGTTAAGGGGGGCCACTTAATGCAATCTCTTTCAAAGAATAACATCAAACATTTAAAAGAAGAGGTGCTTGTATCTGAAGGGGTGAAAAATTTAATTTCGAGGGACATGGACGAACTTCTGAGAACTGCGGCATTAGATAAGAGAGAAGAATTAAAAGTTTTCTCTGGGGAGGTGGTTCGCTTTGGAAATCGATGCAAAGATCCTCAGTGGCATAATTTGGAACGCTACTTTGAGAAATTGGGCTCAGAAGTTTCACTTCAAACACCGTCAAAGGTAGAAGCTGATGCAGTGATGCAACAATTGATGACATTAGTGCAGCATACAGCTGAACTATATCATGAGTTACAAGCCTTGGATAGATTTGAACAAGATCATCGTCGTAAGCTTCAAGAAGAGGATAACCCAAATGCTGCTCAAAGAGGAGATAGCCTTGCAATCTTAAAAGCGGAACTTAAGAGTCAAAAGAAGCATGTCAGAAATTTGAAGAAGAAATCTCTTTGGTCCAAGATTCTGGAAGAGGTGATGGAAAAACTGGTAGACATTGTGCATTACTTGCATCTGGAGATTCATGAAGTTTTTCGTAGTGCTGAAGAAGATAAGCCAACGAAGGGTCCTCAGAATAACAATAAAAAGTTGGGTTCTGCTGGTCTTGCTTTGCATTATGCAAATATTATTACCCAAATTGACACCCTTGTTTCTCGATCAAGTTCCATGCCTCCAAACACGAGGGACGCGTTGTATCAAGGATTGCCACCAAATATAAAGGCATCTTTCCGCTCAAAATTACAGTCGTTTCATGTCAAGGAAGAGCTGACTATTGAGGAAATCAAAATTGAAATGAGGAAAACTTTGCATTGGCTTGTTCCCATTGCCAATAACACTACCAAAGCGCACCATGGCTTTGGTTGGGTAGGAGAATGGGCAAATACCGGGTCTGAAGTAAACGGAAAAACTTCCTGCCAGACAGAGTTGCTCAGAATCGAGACCCTCCACCATGCCGATAAGGAAAAAACAGAGCATTACATCCTGGAATTGGTAGTGTGGCTTCATCATCTGGCGAATCAAACAAGAGTCTGCAATGGCGGACTTAGGTCTCCTGTTAAGTCTCCTATCAGATCACCAAACCAGGGGACCGGTCAGTTCTCAAATCAGAAACAACCAAATTCATCTTCACGCTCTACATTGACAATCGAAGATCGAGAAATGCTTCGAGACGTGAGCAAAAGGAAACTCACCCCTGGAATAAGTAAAAGTCAAGAATTCGATTCGGCAAAACCGAGGCTAAGCAAGCACAATAGGTTGACCAAAAGTAGTAACCACTCTCCAACAAGTGAAAATAAGATGGATCATTTCCTGGTTAGGAGGCTGGCTTCTTTCCCCATCATCGACTTTGACATTGATCGCATCAAAGCCTTAGACGCCATCGATCGAGTGGACACGATTCGAAGTTTGTAA 1974 42.05 MGGICSRARRPDANGDNGSGGSFGHANGHSDNCHVVVYPSHGPTSKVTNSSVPSLVGDSLTKELQEPFSFPATNVDSHGLSVDIVNDGIPSLSRALSQKSRSTKSRAVSVGKVSEVGSLLNRASTAGFGKAVEVLDTLGSSVTSLNISSGFTLGVNTKGNKISILAFEVANTIVKGGHLMQSLSKNNIKHLKEEVLVSEGVKNLISRDMDELLRTAALDKREELKVFSGEVVRFGNRCKDPQWHNLERYFEKLGSEVSLQTPSKVEADAVMQQLMTLVQHTAELYHELQALDRFEQDHRRKLQEEDNPNAAQRGDSLAILKAELKSQKKHVRNLKKKSLWSKILEEVMEKLVDIVHYLHLEIHEVFRSAEEDKPTKGPQNNNKKLGSAGLALHYANIITQIDTLVSRSSSMPPNTRDALYQGLPPNIKASFRSKLQSFHVKEELTIEEIKIEMRKTLHWLVPIANNTTKAHHGFGWVGEWANTGSEVNGKTSCQTELLRIETLHHADKEKTEHYILELVVWLHHLANQTRVCNGGLRSPVKSPIRSPNQGTGQFSNQKQPNSSSRSTLTIEDREMLRDVSKRKLTPGISKSQEFDSAKPRLSKHNRLTKSSNHSPTSENKMDHFLVRRLASFPIIDFDIDRIKALDAIDRVDTIRSL 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25999831 26008832 - BLOR04783 Blo12g00764 68025

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00764 657 MobiDBLite consensus disorder prediction 581 619 - -
Blo12g00764 657 MobiDBLite consensus disorder prediction 1 26 - -
Blo12g00764 657 Coils Coil 317 337 - -
Blo12g00764 657 MobiDBLite consensus disorder prediction 536 567 - -
Blo12g00764 657 MobiDBLite consensus disorder prediction 542 567 - -
Blo12g00764 657 PANTHER - 1 656 - -
Blo12g00764 657 Pfam Domain of unknown function (DUF3475) 164 220 IPR021864 GO:0045927
Blo12g00764 657 Pfam Protein of unknown function (DUF668) 385 469 IPR007700 GO:0045927
Blo12g00764 657 PANTHER OS01G0873900 PROTEIN 1 656 IPR045021 GO:0045927
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00764 - - - mcha:111006935 958.362
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01757 Blo12g00764 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo10g00231 Blo-Chr10:3127252 Blo12g00764 Blo-Chr12:25999831 6.18E-180 dispersed
Blo11g00371 Blo-Chr11:3138778 Blo12g00764 Blo-Chr12:25999831 0 dispersed
Blo12g00764 Blo-Chr12:25999831 Blo18g00778 Blo-Chr18:22223253 9.10E-118 dispersed
Blo13g00940 Blo-Chr13:31836968 Blo12g00764 Blo-Chr12:25999831 2.00E-12 dispersed
Blo01g01757 Blo-Chr1:57330390 Blo12g00764 Blo-Chr12:25999831 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1271 Blo01g01757 Blo12g00764 . Bda03g00418 Bpe02g00185 Bpe04g00383 Bma04g00394 Bma01g02540 . . . Cma09g01148 Car01g00839 . . Cpe06g00928 . . . . . . . . Cla08g00750 Cam08g1177 Cec08g0767 Cco08g0875 Clacu08g0883 . Cre08g0685 . . . . . . . . . . . . . . . . Sed07g2813 . Cmo09g01241 . . . . . Cpe02g00923 Bhi09g01580 Tan01g3004 Cmetu01g2180 . . . . Cla09g00971 Cam09g1023 Cec09g1026 Cco09g1037 . . Cre09g0988 . . . Cme01g00726
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004658 1 1 2 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 2 42
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00764 Blo_Chr12 FPKM 5.964784 4.113531 21.36689 19.304522 17.667437 17.19515 19.506422 10.174109 9.53969 11.96684