Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00766 ATGGGCCCATTTGAAGTGGGACCCAATGTTGAAATGGGCCATCAAATGGGAAGGTTGAATGGCAATCAACATGACTACCCGTGTCTACGATCATCGAGTACGACCAATCTCAGTTGGCTGCTTTCGCTGGGGAAGAAAAGTTGTCCAATTCTTGTTCCTTTTCTTGTTCCGGAGATTGGTTCTGTTCTGTTCTTTGGACTGCTGCCGAGGTCACTGGCAAAGCTTTGTTCTTTCCGATTACTTTACTTATCTGATTGCAATGCTTTTACTCGTTATCTTTCGCCATCAGTTCATTCGAGGCGAATTCATTTACCCAAAATCTGCTCTTGTCTACCTTGGTTCTTCTTTCTGGCTTCAATTGATATGTGCCATCGTTGTTGTGCGGAGATGACCAAACATGAAGATTTGCAAATGGAGAATAAAAATTCTTCCAAAGTAGATGCTAGTGGCACCAAATTGTATTGGAAATCTTGTGGAGAGACTCCAGAGATAGAATTTTTAATGAACAATAGTATGAAATCTGTGCTAAGTCCAATGCCTTCATTGCCAAGCAGTGATTACAGTGATTATTCTATTGAGATGAACTCAGGTGACAGTTTTGATTTTGTCAGGAACCTTGAGGATCTTTCGTATAGACTAGATATGCTGTTGCAGAAGCCAATTGGTGAATATATACGAATTGGGAGTGAGAGATCAAATGCATTGACCGAAAGAGATAAGGTGAATGATATGTACAAGGTAAGAGATACTGAAATTATGCAACCCAATAATGGTGATGAGGCCATTCATAAAAATTATAGACATTCTCTAAATAATGAGACAGAGAGTTCTTCCCTTATTTGTGGTGTGATGGATGCTGCAATCTGGGAACCTCCTGGACCTGGAGACCCTGATGATGACATTGAAGAAAACTTTGCAAACGATGATGATGAAGAAGCAAGTGTGGTTTATAATCAATACAACAATATTGAAGAATGCAGTGATAAAACAAAATTTGGCAAGCCAATTTCTTCGAGTTTTAGAGAAAGAAATGCTAGCTTTAAACTTAGAGATGAGAAACTAAGAGCAATGGAAGAGGTTTATAACGGGCGGTTCAAGTCTGTTGTTCATCAACTTTTTCAATCTTTTGGAGTTGCTTTTTTGGCTGAAGATGGTGAAAATTGGGTGGATATTGTTACGTCTTTGTCTTGGGAAGCTGCTTCCTTTTTGAAGCCTGACACCTCAGATGGAAAAGCAATGAATCCCGACGGCTTGGTAAAAGTTAAATGTGTTGCTGTGGGATCTTGTAACCAAAGTAAATTTATCAAGGGTCTAGTCTTCAAAAAGCACGCATCTCACAAGCACATGCCAACCAAATTTAAAAACCCGAAGTTGCTGTTGATCCAAGGAGTGCTAGGTTCGTCTTCAAGTGGGTTGCTATCGCTCAATACAATGGATCAGGAAAAGGATCATGAAAAGTCTATAATTGAGATGATTGAATCATGCCAACCGGATGTGATATTAGTCGAAAAAACTGTCTCTCGTGGTATCCAAGAATCTATTCTTAGAAAAGGAAGGACATTAGTTCTTGAGATGAAGCTTCACCGGTTAGAGAGAATTGCTCGTTGTCTTGGTTCGCCTATCCTATCTTCTGATTCTATGATGAACCAAAAGCTAAAGTATTGCGACACTCTTTACTTTGAAAAATACGTAGAAGAACATGTCACTTTTGGCGAGGAGGGAAAGCGTGCAAGTAAGACATTATTGTTCATTGAGGGTTGTCCTACACGTCGAGGTGGTACGATTTTGCTGAAAGGATCGCACAGTGATGAATTGAAGAGGATTAAGTGTGTAGTTCGCTGTGCAGTGGTCATTGCCCATCATTTGATACTTGAGACTTCATTCCTTGTCGATCAGAGTGCTATGTTTACGACGATACCATTTGTGGACTTGTCAGAATTTATGCCACTTAACAAACAATTCCCTGATTTGGTTCGTAGTAGTTCTCAACTTGAGGAACCGGCTGATAATAGTCTTCAATCCACTGTTGATATTCCCATTTCCACCGAATTTCAAGGAGGTTCTGAAGAATCAAACTTGGAATTGGAAGGGGACTTGGTGATTTCTCATGAACCATATAATCCAATTATTTTTTCTGGCTTTTCCTCCCTCTCAGAATCGCTGAAAAAGGTTCTTGATATCCCTTTTGCCTCGTCGTATTCATCATTATCGTCTTATTTTGGATTCCATGGAGACGGACCTGATGGTCAGACCAATGAGACCATTTCCATTCCAATTGTGACAGAGACAGATCATGGTGATAATGAAAGTAAAGGTACATCAGATGAAGAGAACTTAGTTGAAGATGTAAAACCCCAGTCTATACCAACATTCTCTGAAAGCCCAGCTGAGGTGGAAAAGGCTCATGGGTATGTTGAAGAGCATGCAAAGAGAGAGGATAATGTCCACCCCACACCAAACTCCCAGAGTATCTTAGTTCTGATGTCAAGCCGAAATGCTATGAGGGGAGTTGTATGTGAACAAAGCCATTTTTCTCACATCATGTTCTACAAGAATTTTGATATTCCGCTAGGAGAGTTTCTACGGGAAAATTTATTAAATCAGAATACCAAGTGCAATTCATGTGGTGAACCGCCGGGAGCTCACTTGTACTACTATGCTCATAATAACAAGCAGCTAACAATCCAAGTCCGACAGATTTTGGGAGGTAAATTCTTGCCTGGGAAAAAGGAAGGGAAACTTTGGATGTGGAGTCGATGTGGTTATTGTAAATCGGAAAAAGGGACGTCAAATTATAGCAAAAGGGTGTTAATTTCATCTGATGCACGATGTTTATCATTCGGGAAGTTCCTTGAGCTCAGTTTCTTTCACTATTCTTCATCCAGTAAATTGTCCAGCTGTGGCCATTCATTGTACAGAGACTTTCTCCACTTCTTTGGATTCGGCCCCATGGTTGCTATGTTCAAATATTCTCAGGTTCCAACTTACACAGTGTCTGTTCCTTCTCAGAAGCTGGAGTACGGCAAGTTAGATGGACAAGAGAGGGTTATCAAAGCAACTCAAAATGTGTACACGAAAGGGATGCAACTGTTCACGGAGATCGCAAACGCTTTGAAAAAGATCAGATCTCAACTTAAAAGGACAACTTTGAATCTTCAAGGCTCACTTAAAGACTTCTCTGTCGTTGAAGAGATGCTGAAGAGGGATAGATTTGAATTTGAGGTGAACATTCATAATACTCTTACTGATGATGGGAATGCTGACCCTGTTTACAAGTTTCTCCTTATTAATCGCCTTCGCTGGGAGCTTTTGCTGGAATCATGTATATGGGATCGTCGCCTTTATTCGCTACTTTCACCGAATTCACCTATTTACTGTGAAGTGGCTGAAAAAGTTATGCCTGAACCAATTAGAGTAACTGAAGGGACAGAACAAAATGATGAAATAGGAACTCATGACAGTCCCCAATCAGCAATTCAGCCAGAGAAATCATTAGGATCAAATGAATTTTTGGTGAAAGATAACATTGTTGAAGTAGTTGTTCCAATAAATACAAATTCCTCACCCGATAATTCAAGCCAGAAGAATTATGATATTCTGTTCGAACACGTCCAGAGTTCCAAATATGATTCTTCCAATGTATATGCGTCAAAAGGAGCGTCTTTGAATAAATCCTCCTCCAAATTAGGAGTTTCAAAGGATTGGTACTGGACACCATTTTCTGAGATTCGGCAGGTGCATATAAAGGACATTATGAGAAGTTATATACCGAAATTTGAGGTCGTGAGTAGTGATACGGCAAAATATTTGCCCTCAGCATACCAACTAATAATGCAAGAAGGATCGAGGCTTCGCATTCCTCTTGGAACTGATGATCATATTGTGTCAGATTATGAGGGAGAACTCTCGAGCATTGTCGCCTGTGTTCTGGCGATGTTGAATGAACTACCTGTCCAAGCAGAAATCCCAGATCAGGAAAAGGTAGAGCTCGGCATTTCTTCTAAATCGTTTGATAATTTACGCAGCCTGAATCGATTTCCTTCAAGTGGATCTTCAGAGTCTGAATCCATACATTCTACTGAAGGATTAAGATTTTTCAGTTTTGATGGGTTGAATCTGCTAGATTCTATTGTTCCAGAGACTTTTAGACCAGCAGAACCTGAAGGGGTTGTGCGATCACTTGCAAAGGGAAAATATATCGTAAATTGCCCATATTTCCTTAAGTTTCTCGATCTTCGGAGCCGATGCTGCCCATCTGAGTTACATTACATTGCTTCTCTGAGCCGTTGTAGAGACTGGGAAGCCCAAGGCGGAAAAAGCAAATCTTTTTTTGCTAAAACACTTGATGACAGGTTCATAATAAAGGAAATTAAGAAGACAGAATACGATTCCTTCATGAAGATTGCGCCTGATTATTTCGAGTATATGAATCAATCGTTTGAATTGGGAAATCAAACTTGCCTAGCCAAAGTTCTCGGGATTTATCAGGTAATGGTTAGACAGACAAAAAGTGGGAAGGAGACGAGGCATGATCTGATGGTGATGGAGAATCTTACATTTGGTCGGAAAATTTCTCGTCAATATGATCTCAAAGGAGCCCTTCATGCTCGATACAACTCAGTCACCAGCGACGTGCTTTTAGATCAGAATTTCGTCAACGACATGAATTCATCCCCGTTGTATGTTAGTAACCAAGCAAAGCGAATCTTGCAGAGGGCTGTTTGGAATGACACAACTTTCCTCAATTCGATAAATGTAATGGACTATTCTTTACTTGTCGGAGTCGACTCCGAAAGGCGAGAACTTGTCTGTGGAATCATTGATTACCTAAGGCAATACACATGGGATAAGCAGCTAGAGACATGGGTAAAGTCTTCGCTCGTTCCTAGGAATGTCTTGCCGACTGTAATATCTCCGAAAGAGTACAAGAGGAGATTCAGAAAGTTCATGTCGACGAATTTCTTTAGCGTCCCGGATCATTGGTGCATGCAGAGAAATGGAATAATATTGTATTCGTTTATTATGAAATGTGAAAATGGAAGCAGATTTTCAGAACCTGTTTTTGTAGATGGAGATGGAGATGGAGATGATCAAAAGCAGTTTGAAATCCCTCACGAGGTCCCGTCTCAAAGCGCAGCTACGAACCAGGCGAGGAGCACTTGGCAGGCCCGTATTGGTCGGGATATTTGGCTGAGGAGTCACTTTGGAAGACGAGGCAAATGCGGGATATGTGAGGGAAAAGAGAGAGCTGGCGCAGAGTATGGTATTCATGGAGTTAAGAAGATTAGAGGAATGTTCGTGTTTGGAAGCTCTCTGGTCGACAATGGAAACAATAATTTGATAGAGAATTCTATAGCTAAAGCTAACTATTTGCCTTATGGAATAGATTTTCCTCTAGGATCTTCTGGTAGATTTACAAATGGAAAGAACGTGGTCGATTTTCTGGGTGATTTTCTCGAACTTCCGTCTTACATTCCTGCATTTTATGACCCTGCAACTAAGGGGAAGAACATCGTTAATGGAGTCAACTATGCCTCCGGTGGCTCTGGCATTCTCGACAATACTGGTTCTTTTGCGGGGAAAGTAGTAAGTCTAAGTGAACAGATAGCAAACTTTGAGGAGGTGACGTCGCCGGAGCTGGGTTGCATCCATGGCGGTCAGCGGCCGTTATCAGTCGTTGGAGACTACTTGTTTCTTGTTGGGAGTGGAGGAAATGACTATTCACTCAACTATTTTCTCTTCAGATCCTCCCTCAATATCTCTCTCCGTACATTCACCGTTAATCTCACCGCCTCTCTCTCTCTCCAACTCAAGAAATTACACAGTTTGGGAGGAAGAAAATTTGTGATAATGGGAGTAAATCCACTGGGCTGCAGTCCATTTGCAAGAAGAGAGAGAAAAGAGTGCAACACAGAGATGAACATGGCGGCTCATCTATTCAATCTAAACTTGAAGACGATGGTCGATGAGATTAGGCCCCAAATGCCAGGATCTACCCTCGTTTTTGTCAATTCCTACAAAATTCTCGAACATATCATCAACTTTCCAACTCTCAAAGGTTTCAAGGACGCTAAGAGAACTTGTTGTGAAGTGACAAAGGTGAGTGAAGGTGGGAATGGCATATTATGCAAAAGAGGAGGGCAAACATGTCCAAACAGAAAGGATTATGTTTTCTTTGATGGGCTACACCCAACAGAAGCTGTCAATTTCCTCATAGCAAAGAAAGCTTTTTCCTCTCAATTTCTTAATGAAGTTTATCCAACTAATGTTCAAAATCTCACTAAGATTTAG 6291 40.9 MGPFEVGPNVEMGHQMGRLNGNQHDYPCLRSSSTTNLSWLLSLGKKSCPILVPFLVPEIGSVLFFGLLPRSLAKLCSFRLLYLSDCNAFTRYLSPSVHSRRIHLPKICSCLPWFFFLASIDMCHRCCAEMTKHEDLQMENKNSSKVDASGTKLYWKSCGETPEIEFLMNNSMKSVLSPMPSLPSSDYSDYSIEMNSGDSFDFVRNLEDLSYRLDMLLQKPIGEYIRIGSERSNALTERDKVNDMYKVRDTEIMQPNNGDEAIHKNYRHSLNNETESSSLICGVMDAAIWEPPGPGDPDDDIEENFANDDDEEASVVYNQYNNIEECSDKTKFGKPISSSFRERNASFKLRDEKLRAMEEVYNGRFKSVVHQLFQSFGVAFLAEDGENWVDIVTSLSWEAASFLKPDTSDGKAMNPDGLVKVKCVAVGSCNQSKFIKGLVFKKHASHKHMPTKFKNPKLLLIQGVLGSSSSGLLSLNTMDQEKDHEKSIIEMIESCQPDVILVEKTVSRGIQESILRKGRTLVLEMKLHRLERIARCLGSPILSSDSMMNQKLKYCDTLYFEKYVEEHVTFGEEGKRASKTLLFIEGCPTRRGGTILLKGSHSDELKRIKCVVRCAVVIAHHLILETSFLVDQSAMFTTIPFVDLSEFMPLNKQFPDLVRSSSQLEEPADNSLQSTVDIPISTEFQGGSEESNLELEGDLVISHEPYNPIIFSGFSSLSESLKKVLDIPFASSYSSLSSYFGFHGDGPDGQTNETISIPIVTETDHGDNESKGTSDEENLVEDVKPQSIPTFSESPAEVEKAHGYVEEHAKREDNVHPTPNSQSILVLMSSRNAMRGVVCEQSHFSHIMFYKNFDIPLGEFLRENLLNQNTKCNSCGEPPGAHLYYYAHNNKQLTIQVRQILGGKFLPGKKEGKLWMWSRCGYCKSEKGTSNYSKRVLISSDARCLSFGKFLELSFFHYSSSSKLSSCGHSLYRDFLHFFGFGPMVAMFKYSQVPTYTVSVPSQKLEYGKLDGQERVIKATQNVYTKGMQLFTEIANALKKIRSQLKRTTLNLQGSLKDFSVVEEMLKRDRFEFEVNIHNTLTDDGNADPVYKFLLINRLRWELLLESCIWDRRLYSLLSPNSPIYCEVAEKVMPEPIRVTEGTEQNDEIGTHDSPQSAIQPEKSLGSNEFLVKDNIVEVVVPINTNSSPDNSSQKNYDILFEHVQSSKYDSSNVYASKGASLNKSSSKLGVSKDWYWTPFSEIRQVHIKDIMRSYIPKFEVVSSDTAKYLPSAYQLIMQEGSRLRIPLGTDDHIVSDYEGELSSIVACVLAMLNELPVQAEIPDQEKVELGISSKSFDNLRSLNRFPSSGSSESESIHSTEGLRFFSFDGLNLLDSIVPETFRPAEPEGVVRSLAKGKYIVNCPYFLKFLDLRSRCCPSELHYIASLSRCRDWEAQGGKSKSFFAKTLDDRFIIKEIKKTEYDSFMKIAPDYFEYMNQSFELGNQTCLAKVLGIYQVMVRQTKSGKETRHDLMVMENLTFGRKISRQYDLKGALHARYNSVTSDVLLDQNFVNDMNSSPLYVSNQAKRILQRAVWNDTTFLNSINVMDYSLLVGVDSERRELVCGIIDYLRQYTWDKQLETWVKSSLVPRNVLPTVISPKEYKRRFRKFMSTNFFSVPDHWCMQRNGIILYSFIMKCENGSRFSEPVFVDGDGDGDDQKQFEIPHEVPSQSAATNQARSTWQARIGRDIWLRSHFGRRGKCGICEGKERAGAEYGIHGVKKIRGMFVFGSSLVDNGNNNLIENSIAKANYLPYGIDFPLGSSGRFTNGKNVVDFLGDFLELPSYIPAFYDPATKGKNIVNGVNYASGGSGILDNTGSFAGKVVSLSEQIANFEEVTSPELGCIHGGQRPLSVVGDYLFLVGSGGNDYSLNYFLFRSSLNISLRTFTVNLTASLSLQLKKLHSLGGRKFVIMGVNPLGCSPFARRERKECNTEMNMAAHLFNLNLKTMVDEIRPQMPGSTLVFVNSYKILEHIINFPTLKGFKDAKRTCCEVTKVSEGGNGILCKRGGQTCPNRKDYVFFDGLHPTEAVNFLIAKKAFSSQFLNEVYPTNVQNLTKI 2096
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26014996 26030534 - BLOR04785 Blo12g00766 68027

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00766 2096 CDD SGNH_plant_lipase_like 1765 2078 IPR035669 -
Blo12g00766 2096 SUPERFAMILY SAICAR synthase-like 1403 1654 - -
Blo12g00766 2096 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1380 1517 IPR027484 -
Blo12g00766 2096 Gene3D - 1519 1655 - -
Blo12g00766 2096 SMART PIPK_2 1371 1655 IPR002498 GO:0016307|GO:0046488
Blo12g00766 2096 Pfam GDSL-like Lipase/Acylhydrolase 1766 2075 IPR001087 GO:0016788
Blo12g00766 2096 Pfam TCP-1/cpn60 chaperonin family 387 628 IPR002423 GO:0005524
Blo12g00766 2096 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1335 1654 IPR002498 GO:0016307|GO:0046488
Blo12g00766 2096 Gene3D GroEL 430 599 IPR027409 -
Blo12g00766 2096 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1602 1651 IPR002498 GO:0016307|GO:0046488
Blo12g00766 2096 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1436 1599 IPR002498 GO:0016307|GO:0046488
Blo12g00766 2096 SUPERFAMILY GroEL apical domain-like 431 599 IPR027409 -
Blo12g00766 2096 PANTHER 1-PHOSPHATIDYLINOSITOL-3-PHOSPHATE 5-KINASE FAB1D-RELATED 277 1671 - -
Blo12g00766 2096 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 277 1671 - -
Blo12g00766 2096 CDD PIPKc_PIKfyve 1405 1654 IPR044769 GO:0000285
Blo12g00766 2096 Gene3D SGNH hydrolase 1756 2080 IPR036514 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00766 K00921 PIKFYVE, FAB1; 1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150] - cit:102608890 1539.24
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01753 Blo12g00766 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00806 Blo-Chr7:25923706 Blo12g00766 Blo-Chr12:26014996 1.53E-64 dispersed
Blo10g00959 Blo-Chr10:28650079 Blo12g00766 Blo-Chr12:26014996 4.73E-64 dispersed
Blo12g00766 Blo-Chr12:26014996 Blo12g00809 Blo-Chr12:26460626 9.58E-70 dispersed
Blo01g01753 Blo-Chr1:57307896 Blo12g00766 Blo-Chr12:26014996 9.77E-170 transposed
Blo01g01752 Blo-Chr1:57296293 Blo12g00766 Blo-Chr12:26014996 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1291 Blo01g01753 Blo12g00766 . Bda03g00416 . Bpe04g00382 Bma04g00393 Bma01g02536 . . Cma01g00940 Cma09g01164 . . . Cpe06g00922 . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00848 . . . . . Sed10g1778 Cmo01g00980 Cmo09g01166 . . . Car09g01041 . . Bhi09g01567 Tan01g2976 Cmetu01g1498 . . . . Cla09g00962 Cam09g1014 Cec09g1017 Cco09g1029 . . Cre09g0977 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004019 2 1 2 1 2 1 2 1 1 1 1 1 2 1 1 2 1 2 1 1 1 1 1 1 1 0 0 7 3 1 43