Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00788 ATGCTGGGCGACTCGAGTGTCTTAGGCAGCTCCGGTGATGCCACGCCGTCTGTTCCGCCCTCGCTTCTAGCTCACCCCCATGATGCCGCCTCCGACGGTGGCGGCGCTGCTGCTTCCAATTCTGCTGAAGAAGATAGAGGGAGAGGGGGGGAAGAAGGGGACCGGAGTTTCGGTGGGAATAGGTGGCCGAGACAGGAGACTTTAGCTCTTCTGAAGATTCGGTCCGATATGGAAGTGGCTTTCCGGGATGCAAGCGTTAAGGGTCCATTATGGGAAGAAGTATCCAGGAAACTCTCTGAGCTTGGATATCATCGAAGCTCCAAGAAATGCAAGGAGAAATTCGAAAACGTTTACAAATATCACAAAAGAACTAAAGAAGGAAGAAGCGGAAAACCAGATGGAAAAACCTACAGATTTTTTGATCAACTAGAAGCAATGCAAAGTCAGTGTCCATCATTACAGTCACTATCTTCTTCACAGCAGCCTCGACCTCGAGGTCCAATGCCGCCTACAACAATGGCGGCTGCGATCACGGTGGCTATTCCTCAAGCAGTCTCTCAGAGCTCCACTGTTCCATCAATGGCGGCTCATCACTTGGTGGGTATGTCTCAAACTATTCCTTCGTTTCAACATAGCAACCCAGCTATTCTCCCTCCGCCTCCTCAACCAAACCCTACACATAATCCATTTCAAACGGCCTTTCCATCGTCTTTTCCGAACCTTGCTGCCGATGTCATTTCGAATTCTAATTCTTCGTCGACTTCGTCAGACGAAGAATTGGAGAGCCGGAGGAGAAGAAAGAGGAAATGGAAGGATTTTTTTGAGAGGTTAATGAAGGAGGTGATTCATAAGCAAGAGGAACTGCAGAAAAAGTTCTTGGAAGCGGTGGAGAAACGAGAACACGAAAGAATGGTTAGAGAAGAAGCTTGGAGGATTCAGGAAATGGCCAAAATCAATAGGGAGAGGGAAATTCTAGCTCAAGAACGATCAATGGCTGCAGCGAAGGACGCTGCAATAATGTCGTTTCTACAGAAAATATCCGAACAGCAAAGCCAAAACCCTGGCCCACCGGGACAACAACTAGTCCAACGGTTACCGACAGAATCACTCGAACTAATATCTAAAACTGATAACGGCGATAATTACGCATCGGCAAGCTCTTCAAGATGGCCAAAAGTGGAAGTTGAAGCTCTCATAAGTTTACGTACAAATCTTGATTCCAAGTATCAAGAAAGTGGGCCAAAAGGGCCATTGTGGGAGGAGATCTCAGCCGCCATGCGAAAGCTTGGATACAATCGCAATGCGAAGAGATGTAAAGAGAAATGGGAGAACATCAACAAGTACTTCAAAAAGGTGAAAGAAAGCAACAAGAAAAGACCCGAGGATTCAAAAACATGCCCCTACTTTCACCAGCTCGATGCATTGTACAAAGAAAAGAACAAGTTTGATAACTCGATGTCACATTTATTCAGGCCGGACAGTTCAATGGTGCCATTAATGGTTCGACCGGAGCAGCAATGGCCTCCCCAAACGCGACCTGACTCCGGCAACGAAGACATGGAAAGCGAACCGATGGATCAAAACCCAGATGACGATGGTAAAGATGGAGAAGATGAGGAAGAAGAGCACGAAAGTGGAGGGAATTACGAACTTGTTGCCAGCAAACCAGACTCAGTGAGTGCAGCCGGGTGA 1692 47.4 MLGDSSVLGSSGDATPSVPPSLLAHPHDAASDGGGAAASNSAEEDRGRGGEEGDRSFGGNRWPRQETLALLKIRSDMEVAFRDASVKGPLWEEVSRKLSELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKPDGKTYRFFDQLEAMQSQCPSLQSLSSSQQPRPRGPMPPTTMAAAITVAIPQAVSQSSTVPSMAAHHLVGMSQTIPSFQHSNPAILPPPPQPNPTHNPFQTAFPSSFPNLAADVISNSNSSSTSSDEELESRRRRKRKWKDFFERLMKEVIHKQEELQKKFLEAVEKREHERMVREEAWRIQEMAKINREREILAQERSMAAAKDAAIMSFLQKISEQQSQNPGPPGQQLVQRLPTESLELISKTDNGDNYASASSSRWPKVEVEALISLRTNLDSKYQESGPKGPLWEEISAAMRKLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKNKFDNSMSHLFRPDSSMVPLMVRPEQQWPPQTRPDSGNEDMESEPMDQNPDDDGKDGEDEEEEHESGGNYELVASKPDSVSAAG 563
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 26285447 26287919 - BLOR04807 Blo12g00788 68049
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00788 563 MobiDBLite consensus disorder prediction 501 563 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 210 266 - -
Blo12g00788 563 CDD GT1 60 125 - -
Blo12g00788 563 SMART sant 58 120 IPR001005 -
Blo12g00788 563 SMART sant 386 448 IPR001005 -
Blo12g00788 563 Pfam Myb/SANT-like DNA-binding domain 60 146 IPR044822 -
Blo12g00788 563 Pfam Myb/SANT-like DNA-binding domain 388 475 IPR044822 -
Blo12g00788 563 MobiDBLite consensus disorder prediction 520 545 - -
Blo12g00788 563 ProSiteProfiles Myb-like domain profile. 382 446 IPR001005 -
Blo12g00788 563 ProSiteProfiles Myb-like domain profile. 60 118 IPR001005 -
Blo12g00788 563 MobiDBLite consensus disorder prediction 213 228 - -
Blo12g00788 563 PANTHER - 1 356 - -
Blo12g00788 563 PANTHER - 366 555 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 44 59 - -
Blo12g00788 563 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 356 - -
Blo12g00788 563 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 366 555 - -
Blo12g00788 563 CDD GT1 388 453 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 150 171 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 229 256 - -
Blo12g00788 563 Gene3D - 390 451 - -
Blo12g00788 563 Gene3D - 62 123 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 1 17 - -
Blo12g00788 563 MobiDBLite consensus disorder prediction 1 61 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Blo01g01727 Blo12g00788 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01726 Blo-Chr1:56990659 Blo12g00788 Blo-Chr12:26285447 0 dispersed
Blo04g00970 Blo-Chr4:12136378 Blo12g00788 Blo-Chr12:26285447 1.69E-140 dispersed
Blo11g00151 Blo-Chr11:1204221 Blo12g00788 Blo-Chr12:26285447 1.14E-26 dispersed
Blo12g00787 Blo-Chr12:26264497 Blo12g00788 Blo-Chr12:26285447 4.39E-147 tandem
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13048 PF13837 Myb_DNA-bind_4 1.20E-22 CL0123 Blo TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00788 - - jre:109011419 625.55