Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00791 ATGGGTAGAAAGAAGCCAATTGCTCGGGAAGATGATAACGCGACTGCCCCGGCTCAGGGAGGAGCTAAATCCAAGAAGAAGGCGCTTTTAATAGACGACGACGAGTATTCCATTGGAACAGACTTGTCTGAGGTGTCGCAAGTTCAGGAGGAGAAGGCGGTAACCGCGGGGAAGAAGAAGGGTAAAAAGGGTAATGCAAAAGCTTCGCAGTTGAAAGACGATGAAGAGGATGGTGATTTTGTGCCGGAGATTGTTATCACTGGGAACAAGAAGGAAAAATCCAACAAGGGCGGGGGAAACACGGCTTCTGTATTTGATGCCCTTGATGATGAGAATGATGGAGGAACGATTGATAATGAGAGTATGGTTGAAGAAGAAGATGATGAGCCTGTGCCAGTTATTAATTTTACGGTAAAGAAGAAGAATTCATCCAAAGGTGGAAAGACAAGTGGGAGTACCTTTCAAAGTTCAAGTTTGGATGGACTAGAGGATACGGATAGGGATGAAAAGAAAGATGCGGATGAAGATATTGCTCCAATTAGTTTCTCTGGTAAGAAGAAGAAGTCTTCCAAGGCGACTAAGAAAAGTGATATTCTTTTTAGTTCTGCATTTGTTGATGATGCTGGTGATGAGAATCCTTCTGTATCAGAATCAAGCAGAGCAGGCGATGATGCTGTTGAGGATGAAGATGTCTCTGTTATTGCATTTTCTGGAAAGAAAAAGTCTTCTAAGAAGAAAAGTAACAGTGTTTTTGTTTCATTGGATGATTACAGTGGGCTTGAGAGTGCTAGTGGAGCAGGAGTTGAGCCTGAATTACTGAATGGAGGATCTACTAATGTAGATGCTGATACCTCCGTGACTAATAAGTATGAAGAGGTCACCGTGACTTCAAAAAATAAGAAAAAGAAGAAGAAGAGTGGAAGGACTGCTCAGGAGGAAGATGATTTGGATAAGATTCTTGCAGAACTTGGTGAGGTGTTGCCAGTACCAAAACCTGATGCACCTGCTTCTCTTCCTCCAAAAGAGGATGTTCAGCTTGAACCAACTCTGACTGTTGATGCTTCTACTGAGAAGGAAGCTGAAGAAGAAAGTATGGAGTCGGCTGCAGCAAAAAAGAAGAAAAAGAAAAAGGAAAAGGAAAAGGAAAAGAAGGCAGCTGCAGCTGCAGCTGCTGCTGCTGAGGAGAAGGGTGAAAAAACTGAAGTGCAAACTGAGACAGAACCGAAAAAGGGTGCTGCTAAGGGTAAAGTTACTGAGAAGAAAGTGCCAAAGCATGTTAGGGAAATGCAGGAAGAAATGGCCCGGAGAAAAGAAGAGGAGGAAAGGAAAAAGAGGGAAGAAGAAGAGAAGTTGAGGAGGGAAGAGGAGGAAAGGCTTAGGCAAGAGGACCTTGAGAGGCAAGCAGAAGAAGCAAAGCGAAGAAAAAAGGAAAAAGAAAAGGAGAAGCTTCTGAAGAAGAAACTGGAAGGCAAGCTTTTGACTGGGAAGCAAAAGGAAGAACAGCGAAGGTTACAGGCGATGAAGAACCAGTTTCTTGCAAATGGTGTGGGTTTGCCTCTTCCCACGGCAGACTCTAGTGCACCAGGCAAACGGCCCATATACCAGACAAAGAAGACCAAAATGACCCAACACCAAGCAAACAGTGATCCAGCTAAGGTGGTTCAGAACATAGAAGAAATTGAAAATCAGCAAGACACTGTGTCAGAGATTGAATACGTGAAAGAGAAGAAGATTGAAGATGCAGAAACAATTAATGTGGATGAGAAATCTGAAATTTCTGAAACTGTCGAAGAGAATGGAATAGTTGAAGATGATGAGGATGAGGATGAGGATGAATGGGATGCGAAGAGCTGGGATGATGCTGCTGTTAGTCTATCTATTAAAAGTGCATTTTCCAATGAAGAAGACACTGAATCAGAGTCCATGGTGAGAAAAGAGAAAAAGGTTGTACCAGCTTCTCGTCATGCAGATTCATGTAGCCTCGATATTCCATTGTCACATCTGTGGCAAGCAATTCCTAGACCTGGCTGTGTCTTTGTGTTGCAGCTCAGGTTGGGAGCTGCTGGGCAAAAAATCTATGTGTTTACTGTATATGATTATGATCTCTGTTTTCTCCGCTGTGTGGATCGACTGTATGGCTGGAAAACATGTCGAAATGCACCAATTGTGAAGACAATGAAGCAGCAATCCAAGGACGTGCAGAATGAGTTCAATACGAGGCTCACTCAGATTATTACTCAATTCAAAGAGCAGGGTTTAAATACTGAATTATATTATAAAAACAGAGAAATGGGGGAAACTTTCAGTATAGTACCGACGAGTGCAATAAGTGGTGAAGGCATACCAGATTTGTTATTGTTGCTGGTCCAATGGACCCAGAAAACTATGGTTGAAAAGCTTACTTACAGTGATGAAATGCAGTGTACAGTGTTGGAGGTCAAGGTGGTTGAAGGCCATGGAACAACCATCGATGTTGTATTAGTTAATGGTGTGCTTCATGAAGGAGACCAAATAGTTGGTCCAATTGTTACTTCAATTCGGGCATTATTGACACCCCACCCAATGAAGGAACTCCGAGTTAAGGGCACATATCTGCATCATAAGGAAATTAAGGCTGCCCAGGGGATCAAAATTACGGCCCAGGGCCTTGAGCATGCTATTGCGGGAACTGGTCTTTATGTGGTTGGTCCAAGCGATGACTTGGACGACATCAAAGAATCAGCCATGGAAGATATGAAGTCAGTCTTGAGCAGGATCGACAAGAGTGGGGAAGGGGTTTGTGTGCAAGCATCTACACTGGGTTCTTTGGAAGCATTGTTGGAGTTTTTGAAGTCTCCTGCTGTTAGCATTCCTGTCAGTGGAATAAGCATTGGTCCCGTACATAAAAAAGATGTGATGAAGGCCAGTGTGATGCTTGAAAAGAAGAAGGAATATGCCACTATCTTGGCGTTTGATGTCAAAGTGACACCAGAGGCTCGTGAGCTTTCTGATGAACTGGGGGTGAAGATTTTTATTGCTGACATCATTTATCACTTGTTTGATCAGTTTAAGGCTTACATTGACAATATTAAAGAGGAAAAAAAGAAAGAAGCTGCTGATGAAGCTGTATTTCCATGTGTCCTCAAGATTTTACCAAATTGTATTTTCAATAAGAAGGATCCAATCGTCTTGGGGGTGGATGTACTGGAAGGCATTGCGAAGGAACGGGTTGGAACACCTATTTGTATACCTCAAAGAGAGTTTATTGATATTGGCCGAATCGCATCAATCGAAAACAACCATAAACCTGTTGATACAGCAAAGAAAGGACAGAAAGTAGCCATTAAGATTGTGGGCTCTTCTCCTGAGGAGCAGCAAAAAATGTTTGGTAGGCATTTTGAGCTGGAGGATGAACTTGTTAGTCATATCTCTAGGAAATCGATCGACCTGCTCAAACTCAATTATCGGGATGATTTGTCCATAGAGGAGTGGAGGCTGGTGGTGAAATTGAAGTCTCTTTTCAAGATACAATGA 3513 42.73 MGRKKPIAREDDNATAPAQGGAKSKKKALLIDDDEYSIGTDLSEVSQVQEEKAVTAGKKKGKKGNAKASQLKDDEEDGDFVPEIVITGNKKEKSNKGGGNTASVFDALDDENDGGTIDNESMVEEEDDEPVPVINFTVKKKNSSKGGKTSGSTFQSSSLDGLEDTDRDEKKDADEDIAPISFSGKKKKSSKATKKSDILFSSAFVDDAGDENPSVSESSRAGDDAVEDEDVSVIAFSGKKKSSKKKSNSVFVSLDDYSGLESASGAGVEPELLNGGSTNVDADTSVTNKYEEVTVTSKNKKKKKKSGRTAQEEDDLDKILAELGEVLPVPKPDAPASLPPKEDVQLEPTLTVDASTEKEAEEESMESAAAKKKKKKKEKEKEKKAAAAAAAAAEEKGEKTEVQTETEPKKGAAKGKVTEKKVPKHVREMQEEMARRKEEEERKKREEEEKLRREEEERLRQEDLERQAEEAKRRKKEKEKEKLLKKKLEGKLLTGKQKEEQRRLQAMKNQFLANGVGLPLPTADSSAPGKRPIYQTKKTKMTQHQANSDPAKVVQNIEEIENQQDTVSEIEYVKEKKIEDAETINVDEKSEISETVEENGIVEDDEDEDEDEWDAKSWDDAAVSLSIKSAFSNEEDTESESMVRKEKKVVPASRHADSCSLDIPLSHLWQAIPRPGCVFVLQLRLGAAGQKIYVFTVYDYDLCFLRCVDRLYGWKTCRNAPIVKTMKQQSKDVQNEFNTRLTQIITQFKEQGLNTELYYKNREMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVEKLTYSDEMQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVGPIVTSIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITAQGLEHAIAGTGLYVVGPSDDLDDIKESAMEDMKSVLSRIDKSGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELSDELGVKIFIADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDVLEGIAKERVGTPICIPQREFIDIGRIASIENNHKPVDTAKKGQKVAIKIVGSSPEEQQKMFGRHFELEDELVSHISRKSIDLLKLNYRDDLSIEEWRLVVKLKSLFKIQ 1170
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26301200 26308533 + BLOR04810 Blo12g00791 68052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00791 1170 MobiDBLite consensus disorder prediction 261 501 - -
Blo12g00791 1170 SUPERFAMILY Translation proteins 1035 1169 IPR009000 -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 111 131 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 354 373 - -
Blo12g00791 1170 Gene3D Translation factors 1031 1170 - -
Blo12g00791 1170 PANTHER PHOTOSYSTEM II PROTEIN D1 1 660 - -
Blo12g00791 1170 SUPERFAMILY Translation proteins 803 895 IPR009000 -
Blo12g00791 1170 Gene3D - 699 803 IPR027417 -
Blo12g00791 1170 Pfam Translation-initiation factor 2 905 1017 IPR023115 -
Blo12g00791 1170 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 1 660 IPR015760 -
Blo12g00791 1170 Gene3D - 918 1024 IPR036925 -
Blo12g00791 1170 CDD aeIF5B_II 807 910 - -
Blo12g00791 1170 CDD IF2_aeIF5B_IV 1039 1136 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 206 228 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 306 321 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 161 182 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 1 194 - -
Blo12g00791 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 709 795 IPR027417 -
Blo12g00791 1170 Gene3D Translation factors 804 917 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 277 293 - -
Blo12g00791 1170 Coils Coil 426 488 - -
Blo12g00791 1170 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 901 1030 IPR036925 -
Blo12g00791 1170 PANTHER PHOTOSYSTEM II PROTEIN D1 705 1170 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 381 501 - -
Blo12g00791 1170 MobiDBLite consensus disorder prediction 137 160 - -
Blo12g00791 1170 Coils Coil 358 396 - -
Blo12g00791 1170 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 705 1170 IPR015760 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00791 Blo-Chr12:26301200 Blo18g00546 Blo-Chr18:7706004 3.93E-06 dispersed
Blo01g01723 Blo-Chr1:56962741 Blo12g00791 Blo-Chr12:26301200 3.10E-179 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00791 K03243 - zju:107427478 839.721