Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00827 ATGGGCTGTATTTGCTCAAAAGAATCCCCAGAACCAGAGGAACTCGATGACAACGATAGAGCAGGAGAGTTTAACAAGACTTCAGACCAATCGGCCCCTCCTACTCCTTCAAAAAGGGAAGATTTTGTTCTAAAAATAAGAGGTAGTGTTCAAAATGTTGGTTTAGTTAGCTTTTTATCGAGGCAGGCCTCACAAACAAATGGGGGTCCAGTTCAAGTGCGAAAAGGGAAGAATGGAAGTTCCAATACCGAAGAAAACAAAGCGAGAAATAACGAAAGAAGAAGAAAGGATCATAATCAGAAATTGGCAAAGAAGGATGTGAGGGCGAATGGAAAACTACCGCAGATGTCAAGATTAGTCAGCCTGCCAAATGGAGCAGAAGGTGGACAAGTGCTTGCTGGATGGCCATCTTGGTTAACTTCAGAGGCTGGAGATGCCATCAAAGGATGGATTCCACGACGAGCAGACTCCTTTGAGAAGCTAGACAAAATTGGTCAGGGAACTTACAGCAGTGTATACAGGGCCCGTGACTTGGAAACTGGTAAAATTGTTGCATTGAAGAAAGTAAGATTTGTAAATATGGATCCAGAAAGTGTACGTTTTATGGCTAGAGAAATATGTATTTTGCGTGAACTTGATCATCCAAATGTCATGAAGCTTGAGGGTTTAGTTACTTCCAGAATGTCGTGCAGCTTGTACCTAGTCTTTGAGTACATGGATCATGACCTAGCTGGGCTAGTAGCAACTCCTGGCATCAAGTTTACAGAGCCGCAGATTAAATGCTTTATGCAACAACTATTACATGGGCTTGAATACTGCCACAGTCGTGGTGTTCTGCACCGAGACATCAAGGGTTCAAATCTTCTCATTGGCAACAATGGAGTTCTCAAGATTGGAGACTTTGGTCTGGCAACTTTTTTTGAGCCTGATCAAAAGCAGCCTTTAACTAGTCATGTGGTGACGTTGTGGTATAGGCCACCTGAGCTTTTGCTTGGTTCTACTAAGTATGGAGCCGCCATAGATCTTTGGAGCACTGGATGCATACTTGCAGAACTGTTTGCTGGAAAACCAATTATGCCTGGGAGAACAGAGGTTGAACAAATGCATAAAATCTTTAAACTATGTGGTTCGCCATCTGAGGATTATTGGCAAAGAACTAAATTTCCGCATGCAACCAGTTTCAAGCCTCACCACCCTTATAAGCGATGTCTTACTGAGACATTCAGGAATTTCCCTCCTTCAGCTTTAGCTCTTGTTGATAAGCTTCTATCGATTAAGCCAGAGGAACGAGGATCTGCTAATTCGGCACTTAGAAGTGAGTTTTTCCGAACAGATCCCCTCCCTTGTCACCCTTCAACTTTACCAAAATATCCTCCAAGTAAGGAGTTTGATGTCAAGTGCCGAAATGAAGAAGGAAGAAGGCGAAAAGTAGAGGCCGTGAAGGGACGGGGTCCTGAATCAGTTAGAAGAGGCTCAACGAAACTAGTTGTGGAAGGAGATCCTACATTACCGGGTAAGTCAAAGCCACAAACATCCAGTCATAAACTCAGTGCCAGAGCTGATGGCGGAACTGGAGTTTCTATCGAGCCGCATAGAGGAACTTTGCGTAATGGATTCTCCCATTCGACTTCTATGATTCACCCCCATGCACTAGGATCGTCCTGGAATAAGCCACGCAAAGCTACAAGGAATGATGAAGAATTATGGCTTCATCGACTGCAGAAGCCTCAAGGCGGAGAACATATATCCAACTCTTCCTTTAAAAAAGACAGTAGCTTGCCTGAAAAAGATTTAAGTTCGGGATATGCGCGAAAGAAAAATAGAATCCACTACTCAGGGCCATTGCTGGTTCCAGTGGGGAACGTCGAAGACATGCTCAAAGTGCATGAAAGACAGATCCAACAGGCTGTTCGAAAAGCACATGTTGGCAAATTGAGGACTACTGAAAAGCCATAG 1956 43.87 MGCICSKESPEPEELDDNDRAGEFNKTSDQSAPPTPSKREDFVLKIRGSVQNVGLVSFLSRQASQTNGGPVQVRKGKNGSSNTEENKARNNERRRKDHNQKLAKKDVRANGKLPQMSRLVSLPNGAEGGQVLAGWPSWLTSEAGDAIKGWIPRRADSFEKLDKIGQGTYSSVYRARDLETGKIVALKKVRFVNMDPESVRFMAREICILRELDHPNVMKLEGLVTSRMSCSLYLVFEYMDHDLAGLVATPGIKFTEPQIKCFMQQLLHGLEYCHSRGVLHRDIKGSNLLIGNNGVLKIGDFGLATFFEPDQKQPLTSHVVTLWYRPPELLLGSTKYGAAIDLWSTGCILAELFAGKPIMPGRTEVEQMHKIFKLCGSPSEDYWQRTKFPHATSFKPHHPYKRCLTETFRNFPPSALALVDKLLSIKPEERGSANSALRSEFFRTDPLPCHPSTLPKYPPSKEFDVKCRNEEGRRRKVEAVKGRGPESVRRGSTKLVVEGDPTLPGKSKPQTSSHKLSARADGGTGVSIEPHRGTLRNGFSHSTSMIHPHALGSSWNKPRKATRNDEELWLHRLQKPQGGEHISNSSFKKDSSLPEKDLSSGYARKKNRIHYSGPLLVPVGNVEDMLKVHERQIQQAVRKAHVGKLRTTEKP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26610950 26614505 + BLOR04846 Blo12g00827 68088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00827 651 MobiDBLite consensus disorder prediction 573 605 - -
Blo12g00827 651 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00827 651 MobiDBLite consensus disorder prediction 61 110 - -
Blo12g00827 651 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 84 643 - -
Blo12g00827 651 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Blo12g00827 651 MobiDBLite consensus disorder prediction 590 604 - -
Blo12g00827 651 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00827 651 SMART serkin_6 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00827 651 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Blo12g00827 651 MobiDBLite consensus disorder prediction 9 24 - -
Blo12g00827 651 MobiDBLite consensus disorder prediction 475 539 - -
Blo12g00827 651 PANTHER CELL DIVISION PROTEIN KINASE 84 643 - -
Blo12g00827 651 MobiDBLite consensus disorder prediction 80 108 - -
Blo12g00827 651 MobiDBLite consensus disorder prediction 1 41 - -
Blo12g00827 651 MobiDBLite consensus disorder prediction 61 79 - -
Blo12g00827 651 Gene3D Transferase(Phosphotransferase) domain 1 241 482 - -
Blo12g00827 651 CDD STKc_CDK9_like 158 442 - -
Blo12g00827 651 SUPERFAMILY Protein kinase-like (PK-like) 152 449 IPR011009 -
Blo12g00827 651 Coils Coil 619 639 - -
Blo12g00827 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00980 Blo-Chr6:33101410 Blo12g00827 Blo-Chr12:26610950 0 dispersed
Blo07g00189 Blo-Chr7:2361335 Blo12g00827 Blo-Chr12:26610950 0 dispersed
Blo12g00827 Blo-Chr12:26610950 Blo15g00568 Blo-Chr15:11540362 0 dispersed
Blo01g01669 Blo-Chr1:56440737 Blo12g00827 Blo-Chr12:26610950 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84595 PF00069 Pkinase 1.00E-68 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00827 K08819 - twl:120008126 857.44