Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00848 ATGATAGCGCACTGTCGGCCCAGTTGGCGCGCTGCTGGCCCAGCCCAATCGCGCTGCTGTCTTCTCCTCTGCGGCGCACGCGCTGCCGACGTCTACTCCTGCCTGATGCGCGCCCCGCACGCAGCTTGTTTGCATAGTGCACCCAGCGCACTGTTTGACAGTGGAAGGTCAAGCAGTGCAAGTGTCTTTGTGGGAGGGTTTCTTCTCGGAGGGCTAATAGGTTGCGTATATGCACCTCAGATTAGCAAAGCACTAGCTGGAGCAAACCGAAAGGATTTGATGAAGAAACTTCCCAAATTCATATATGATGAAGAAAAAGCTTTGGAGAATTGTCGCCTTCATTTAGAGGTGTCTAACGAGCCGAGCCAAGCCGAGCCTGAAAAAGTCAGGCTTCTCTGTGAGAACTCTCACAGAGAAGCAGAGAAGCGTTCGCCGCTTCTCTGTGAGATTTCTCACAAAGAAGCAACGTTGCTTCTCTGTGAGAACTTCTCACAGAGAAGCAACGGTCTTCAGACCGTTTCTTGCAACGATCTGAAGACCGTTGGCGAGTGGCGATGGCAATGGTCTCTAGACCGTTGCCTGGAGCTCACTGAAGGCAGAGGACTGAGCCTTCAGGGCTCAGTGCTCAGTGAGCACTGCTCACTGGTCATTGAAGTTGGCTCAGCCAACTTGGCTGCCAAATGCCAATGGTGGCCAACGACTCAGAGGAAGTCAGGTTCTCAGGTGAAGTTCAAGTTGGGTTCTGAATCCACATCAGAGCCGATACGTCAGCCTATTACAGATGTTCAGCGTGATGCAGTCACCACATCGTCACCAATTTCAGTTACAGTTTCACGTCAGAGAGGGAAAAGGGCTGCTGGTATGGATTATTCACGTACATTTACATTGGTAGAGGGAAATTACAACAAAGACAATGGTTCAGCCGCACAAGATGAGGATGCCAATGACTTGAACAATATAAAACAAATGAACAACGGTAAACCTCCACGGCATCTCTCCGTAATGCGCCATAGTATTAGCTCAATGAAGCTAATTGGCCCAACTGATTTGAGTTCAGATATGGGATTCCACGAGAGTAAGTTACCTGATGAAAAGACAGAATTTGTACCTGTTTTCAGATCAGGAAGTTGTGCTGAACGAGGACCTAAACAGTATATGGAGGATGAACACATTTGTATCGATGATCTCTATGAACATATAGGTCCAATCTCTGAGATCATGTCTCCTTGGTCCTTTTATGGGGTGTTTGATGGTCATGGCGGTACAGATGCTGCATCATTTGTCAGAAATCATATCCTCAGATTCACAGTTGAGGATTCTGATTTTCCCGTTAGTATGGAGAAAGCAATTAAAAGTGCTTTTCTAAAAGCTGATTATGCATTTGCTGACACTAGCTCCCTTGATGTTTCCTCTGGTACGACCGTCCTAACTGCCTTTATCTTGGGAAGATCATTGATAATTGCCAATGCTGGTGATTGTCGAGCAGTTTTGGGAAGGCGGGGTCGGGCAATTGAAATGTCAAAAGACCACAAACCCAACTCCCAATCGGAAAGACAGAGAATTGAGAAACTTGGTGGAGTAATTTATGATGGTTATCTCAATGGCCAGCTATCTGTTTCACGGGCCATAGGAGATTGGCACATGAAAGGTGATAAAGGACAGGCATGCCCATTGAGTGCTGAGCCAGAGTTGCAAGAAATGCTCTTGACGGAGGATGATGAGTTTTTAATAATGGGATGTGATGGGCTGTGGGATGTAATGAGCAGTCAGTGTGCTGTCACTATGGCAAGGAAAGAGCTAATGCTCCACAATGACCCTGAAAGATGTTCAAGAGTTTTGGTGAGAGAGGCTCTCAAGCGCAACACGTGTGATAATTTGACAGTCATTATGATCTGCTTTTCTCCCGACCCTCCCCCTCGCATAGAGATACCTCCATCTCGAGTGAGGAGGAGCATATCGGCGGAGGGTCTGAATCTGTTGAAAGGTGTATTGGACTGTAATTGA 2004 47.21 MIAHCRPSWRAAGPAQSRCCLLLCGARAADVYSCLMRAPHAACLHSAPSALFDSGRSSSASVFVGGFLLGGLIGCVYAPQISKALAGANRKDLMKKLPKFIYDEEKALENCRLHLEVSNEPSQAEPEKVRLLCENSHREAEKRSPLLCEISHKEATLLLCENFSQRSNGLQTVSCNDLKTVGEWRWQWSLDRCLELTEGRGLSLQGSVLSEHCSLVIEVGSANLAAKCQWWPTTQRKSGSQVKFKLGSESTSEPIRQPITDVQRDAVTTSSPISVTVSRQRGKRAAGMDYSRTFTLVEGNYNKDNGSAAQDEDANDLNNIKQMNNGKPPRHLSVMRHSISSMKLIGPTDLSSDMGFHESKLPDEKTEFVPVFRSGSCAERGPKQYMEDEHICIDDLYEHIGPISEIMSPWSFYGVFDGHGGTDAASFVRNHILRFTVEDSDFPVSMEKAIKSAFLKADYAFADTSSLDVSSGTTVLTAFILGRSLIIANAGDCRAVLGRRGRAIEMSKDHKPNSQSERQRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGDKGQACPLSAEPELQEMLLTEDDEFLIMGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRVLVREALKRNTCDNLTVIMICFSPDPPPRIEIPPSRVRRSISAEGLNLLKGVLDCN 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26748581 26767143 + BLOR04867 Blo12g00848 68109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00848 667 ProSitePatterns PPM-type phosphatase domain signature. 412 420 IPR000222 GO:0043169
Blo12g00848 667 Gene3D - 358 636 IPR036457 -
Blo12g00848 667 SMART PP2C_4 363 631 IPR001932 -
Blo12g00848 667 CDD PP2Cc 372 633 IPR001932 -
Blo12g00848 667 SUPERFAMILY PP2C-like 367 634 IPR036457 -
Blo12g00848 667 PANTHER PROTEIN PHOSPHATASE 2C 285 655 IPR015655 GO:0004722|GO:0006470
Blo12g00848 667 Pfam Protein phosphatase 2C 374 625 IPR001932 -
Blo12g00848 667 ProSiteProfiles PPM-type phosphatase domain profile. 373 633 IPR001932 -
Blo12g00848 667 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 285 655 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01641 Blo12g00848 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo07g00371 Blo-Chr7:6023821 Blo12g00848 Blo-Chr12:26748581 3.74E-12 dispersed
Blo07g00612 Blo-Chr7:18939160 Blo12g00848 Blo-Chr12:26748581 2.27E-98 dispersed
Blo08g00499 Blo-Chr8:13327471 Blo12g00848 Blo-Chr12:26748581 2.96E-18 dispersed
Blo10g00094 Blo-Chr10:966222 Blo12g00848 Blo-Chr12:26748581 4.98E-95 dispersed
Blo12g00848 Blo-Chr12:26748581 Blo18g00040 Blo-Chr18:265747 4.99E-116 dispersed
Blo01g01644 Blo-Chr1:56247867 Blo12g00848 Blo-Chr12:26748581 6.95E-18 transposed
Blo03g00405 Blo-Chr3:11070346 Blo12g00848 Blo-Chr12:26748581 1.46E-27 transposed
Blo01g01641 Blo-Chr1:56219899 Blo12g00848 Blo-Chr12:26748581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00848 K14803 - qsu:112023621 606.29