Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00852 ATGGGAGAGGTGTCAGAGACGACGATGAAGAAAAAGAAGAAAAAGGGTCGCCCCTCCCTTCTAGATCTCCAAAAGCGTTTCCTCAAACAGCAAAATTTGGATCAACAGCTCTCTAATTCTTTCAATTTAAGCTCCATTTCAACCACGCGATCCAGTCGCCGGAACCCTAACGCGCAGCCGGAGCCGTACCGCATCGCTGTGGACGATGATGATGATGAGCGAAGAGAGAAGAAGCACAAGCTCCTACTCGGTTTGAATTCTCGTCCACATTATCCGACATTGTCGTCTTATTCTTTGTCGCGTAATTTGGTTGCAAACGGTTCTGATTCGAATGGGGGTGGCGAGGATCCCGAGGCTGCACTCAAGAGGCATAAGATCGCTGACATTCATATCGCATCAGATGAGATGTGGGAATATATGGAAATTTATCGTGCTTTTTATTTGTGGTTAGGATCAGAGGTTGGTCCCACGACACCTTTGCCGGACAAAAAGTTGCTGTTATTCATCTTGGACAGGCTCCAAAAAAAGGACACACATGGGGTATTCTCCGAACCAGTGGATGCAGATGAGCTTCCTGATTATTTCGACACCATTGATAATCCAATGGATTTTGGCACGGTGAGGAAGAAATTAGACAAAGGATCTTACGCCAATTTGGAAGAATTTGAGAAAGACATTTTGTTGATATGTTCAAATGCAATGCAATATAATGCACCGGATACCATATTCTTCCGTCAGGCACGAGCTATACAAGAACTTGCAAAAAAGGATTTCCACAATCTTCGGCAAGACAGCGATGATGATGGTGAACCTGAACCAGAAGCTGCAAAGAGAGGCAGACCACCTGCAAAAAATCCAAAGAAGCCACATAATAGGCCTTCATTAGAGTGTGTTAGGAGTCAGACTGAGCTATCCTCAGGTGCCACTGTTGTTTCAGGTGGAAATAGCACCACTGGATTTAATAACATTTACAACTTAAGAAGAGGAAATCATACTTCCAAGGTTCACCATGTTGATAATGTGGCAAGGGGATCCCATGGGTCTCAAAACAGTGAAACTTTGACAAATTGGTTGTCTGAATGGCAGAATGAATTCCCAGCTTCGGTTTTGAGGAGTGTGCTAAAGTGTGGGAAAAATCATCAAATTTCTGTTGATGAGAACAGGCGTGATACGTATAAACAGTCATGGTCATCTATTGATCGATTACCTTTAATGCTAGGCGGAGAATCAAAGCAATTACTGGCTGTAGGTCTGGACGTAGAGCACAGTTATGCACGAAGCATTGCTCGATTCTCAGCTGATCTAGGCCCTGTCGTCTGGAAGGTTGCTTCAAAGAAAATAAAGGATATTCTGCCGGTTGGACTAGACTTTGGTCCGGGGTGGATAGGACATAATGAGGGACCAAAGCAGTTGATGTCCTCATCAACTAAGGGGGACATATTTTTGAACGACTCTCAAGCAATTGACAATCTCCTAACAGCAGGTACATCTGGCTTTGACCCGGGCATTTCAAACCGATTTTCTTCGCCAAAGGATGTGGATATTATTAGGGAATCAGATTTGCAGAATGAGACGATGTTAACCCATAAAGGTGATGATGGGATGGCACCTGCCTCATGTTTTCAGATTGAGAGACCCCAATTTCACCGTGACATAAATGGCTTAAATGGTGGTTTTGGATCTGATTATTCAACCGAAATGCAGGTGACGAGATTTTTGGGCACATCACATTCAGATCAGTTCCCTCACCCTGCCAGATTTGGCATTGCAATTGTGATTCTGGCAATCGAGGTGGTTCACTCGAACAGCCGGACGAGGAGTCTCCTTTCGTGCCCATCCTCTGAAACAGGGAGGGAAAAGGAATCTCGTGGTAAGGGAATAAATAGCCCGAAATCCAGTGCCGCCCGTAGTTTCACATTTCGCGAACTCGCCACAGCCACGAGAGGTTTTAAAGAGGTGAATTTGATCGGAGAAGGAGGTTTTGGAAGGGTTTTCAAAGGCCGCCTAGAAACAGGCCAGGTTGTTGCAATTAAGCAGCTTAACCATGATGGTCTTCAAGGGTTTCAGGAATTCATCGTGGAGGTTTTAATGTTAAGTCTGCTACATCACTCCAATCTCGTCACTTTGATTGGTTACTGCACCGACGGAGATCAAAGACTTCTGGTTTACGAGTACATGCCTATGGGTAGCTTGGAAGATCACCTTTTTGATACGGATCCAGATAAAGAGCCACTAAGTTGGAATAGTCGGATCAAAATTGCTGTTGGCGCAGCACAGGGCCTTGAATATCTTCACTGCAAAGCAAATCCCCCAGTCATCTATCGGGACTTGAAGTCAGCAAATATCTTACTGGACAATGACTTCAACCCAAAACTATCAGATTTTGGTCTTGCTAAACTTGGACCTGTTGGTGATAATACCCATGTTTCAACTAGAGTGATGGGTACATATGGGTATTGTGCTCCAGAGTACGCAATGAGTGGGAAACTGACTCTTAAGTCAGATATATATAGCTTTGGTGTGGTTCTATTGGAGTTAATTACAGGGCGAAAAGCAATAGACTGCACAAAGAAACAGGGAGAGCAAAATTTGGTTTCTTGGTCTCGTCCTTTTCTAAAAGATCGAAGGAAGTTTGTTCATTTAGTTGATCCTCAGTTACAAGGACGCTACCCTCTCCGTTGTCTGCATCATGCTATTGCAATCACTGCAATGTGTCTCCAAGAGCAGCCAACATTTCGACCTCTTATCGGTGATATTGTCGTAGCACTCGAGTACTTGGCTTCTCAGAGTTACACTCCTGAACTACATAAGAGAGGGCGGAACAGCCCCTCACAGCTGTCTCCTTCACAACAGGGCCGGGTTAGTCGGCCTGAGGAGTCAAATTCTGGACTAGGTTCAGCTTCTTTCTGA 2910 44.67 MGEVSETTMKKKKKKGRPSLLDLQKRFLKQQNLDQQLSNSFNLSSISTTRSSRRNPNAQPEPYRIAVDDDDDERREKKHKLLLGLNSRPHYPTLSSYSLSRNLVANGSDSNGGGEDPEAALKRHKIADIHIASDEMWEYMEIYRAFYLWLGSEVGPTTPLPDKKLLLFILDRLQKKDTHGVFSEPVDADELPDYFDTIDNPMDFGTVRKKLDKGSYANLEEFEKDILLICSNAMQYNAPDTIFFRQARAIQELAKKDFHNLRQDSDDDGEPEPEAAKRGRPPAKNPKKPHNRPSLECVRSQTELSSGATVVSGGNSTTGFNNIYNLRRGNHTSKVHHVDNVARGSHGSQNSETLTNWLSEWQNEFPASVLRSVLKCGKNHQISVDENRRDTYKQSWSSIDRLPLMLGGESKQLLAVGLDVEHSYARSIARFSADLGPVVWKVASKKIKDILPVGLDFGPGWIGHNEGPKQLMSSSTKGDIFLNDSQAIDNLLTAGTSGFDPGISNRFSSPKDVDIIRESDLQNETMLTHKGDDGMAPASCFQIERPQFHRDINGLNGGFGSDYSTEMQVTRFLGTSHSDQFPHPARFGIAIVILAIEVVHSNSRTRSLLSCPSSETGREKESRGKGINSPKSSAARSFTFRELATATRGFKEVNLIGEGGFGRVFKGRLETGQVVAIKQLNHDGLQGFQEFIVEVLMLSLLHHSNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFDTDPDKEPLSWNSRIKIAVGAAQGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAIDCTKKQGEQNLVSWSRPFLKDRRKFVHLVDPQLQGRYPLRCLHHAIAITAMCLQEQPTFRPLIGDIVVALEYLASQSYTPELHKRGRNSPSQLSPSQQGRVSRPEESNSGLGSASF 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 26794248 26802833 + BLOR04871 Blo12g00852 68113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00852 969 MobiDBLite consensus disorder prediction 934 969 - -
Blo12g00852 969 MobiDBLite consensus disorder prediction 260 311 - -
Blo12g00852 969 MobiDBLite consensus disorder prediction 260 281 - -
Blo12g00852 969 SMART bromo_6 155 263 IPR001487 GO:0005515
Blo12g00852 969 MobiDBLite consensus disorder prediction 1 20 - -
Blo12g00852 969 CDD Bromodomain 162 258 - -
Blo12g00852 969 ProSitePatterns Bromodomain signature. 179 236 IPR018359 -
Blo12g00852 969 CDD STKc_IRAK 656 924 - -
Blo12g00852 969 Pfam Protein kinase domain 650 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00852 969 MobiDBLite consensus disorder prediction 44 58 - -
Blo12g00852 969 ProSitePatterns Protein kinases ATP-binding region signature. 656 678 IPR017441 GO:0005524
Blo12g00852 969 Gene3D Phosphorylase Kinase; domain 1 622 725 - -
Blo12g00852 969 Pfam Bromodomain 169 248 IPR001487 GO:0005515
Blo12g00852 969 MobiDBLite consensus disorder prediction 295 311 - -
Blo12g00852 969 MobiDBLite consensus disorder prediction 44 72 - -
Blo12g00852 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 772 784 IPR008271 GO:0004672|GO:0006468
Blo12g00852 969 PANTHER OS07G0668900 PROTEIN 616 950 - -
Blo12g00852 969 SMART serkin_6 650 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00852 969 PRINTS Bromodomain signature 207 225 IPR001487 GO:0005515
Blo12g00852 969 PRINTS Bromodomain signature 191 207 IPR001487 GO:0005515
Blo12g00852 969 PRINTS Bromodomain signature 225 244 IPR001487 GO:0005515
Blo12g00852 969 PRINTS Bromodomain signature 177 190 IPR001487 GO:0005515
Blo12g00852 969 ProSiteProfiles Protein kinase domain profile. 650 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g00852 969 SUPERFAMILY Protein kinase-like (PK-like) 627 924 IPR011009 -
Blo12g00852 969 ProSiteProfiles Bromodomain profile. 174 244 IPR001487 GO:0005515
Blo12g00852 969 SUPERFAMILY Bromodomain 154 267 IPR036427 GO:0005515
Blo12g00852 969 MobiDBLite consensus disorder prediction 607 633 - -
Blo12g00852 969 Gene3D - 160 277 IPR036427 GO:0005515
Blo12g00852 969 Gene3D Transferase(Phosphotransferase) domain 1 726 942 - -
Blo12g00852 969 PANTHER OS07G0668900 PROTEIN 616 950 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00606 Blo-Chr4:5238852 Blo12g00852 Blo-Chr12:26794248 8.33E-103 dispersed
Blo12g00852 Blo-Chr12:26794248 Blo12g00288 Blo-Chr12:17085939 1.90E-161 dispersed
Blo13g00473 Blo-Chr13:25617984 Blo12g00852 Blo-Chr12:26794248 6.23E-92 dispersed
Blo12g00852 Blo-Chr12:26794248 Blo02g00584 Blo-Chr2:10803319 2.90E-154 transposed
Blo12g00852 Blo-Chr12:26794248 Blo04g00302 Blo-Chr4:2356696 2.44E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84596 PF00069 Pkinase 1.40E-45 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00852 - - zju:107419850 593.578