Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00895 ATGGATGGGGAGGAGATGCCCATGTCTGCTCAAAGATCACAGCCAAATGAAGGTGGTTTAGAGCCAGATGATGACGAGCCAATTGGGTATTTATTCAAATTGAAGAAACGTCGTATATCTACAAAACCCAAATTGGGCATGGATAATGGTGTTGATAGGAGAAAAAAAGCTGGGATCAAAGGAGGGAAGTTGGTGCTTGAAGATGGGGATTTTTGGGGAATGGATGATACTTTAGCTAGCTTCAGGAAGAAGTTGAAAGTGCCAAAGAAGAACATTGGAACTGTGAGAGTGCGAAGTTCATCTTCACACACATCAGGGTATTCTAATCCATCCACAAGTGAGCTTGTTGGATTCAGGGTTCCAAATGTGAGACTGGCTTCGATGGTTAAGAGAAATGACGAAGAACTGAGTGATGTAGAACCCAATATATCAATGGATGAATGGGTAGAAAAGAAAATAAAAATAGAAGCAAAGGGACTAAATTCAAATTTGAGGACATCTGGTGGCAATGTTGAATGCACTAACGGTGCAAAATCTTTGGATTTATGCTCCTTAGATTCAGTTTTAGTTGGAGAAACAATGGTGGAAGATCAAAGATTAGTTAAAAAATTTCCTCAAATTTCCAACCATATTGAAACGAGTCATAATGAAAATCAAAGGTCGAGTCACTCCCAATGGATTGAAAAAGAAGCTGAAGAATATCTCAACCGTTCAAATTTTAAAGAGGAGTCTACTCTAGGTCACATTGGATTGGATGAAGCATGTGATAGGGAAAGCCAGGAGTTCCCTTGTTTGCAATCAAGAGATGGTTGTCCTTCTTCCAGCCAGAAAAATATGACCCCAAAACTAAATGATGGATTAAAGCATTGTACTGGAACTAAAACCAGGACTTTGGTCAATGGTGCTCTTGTCACATTGCATTCGTGTTATGAAAAAAAGTACATTAAAGAAAAACAAGGGGTGGATAGGGGGATTCTGGTTAGTTGTTGCAATGAATTCTCCAAACAATCAGCTAATATTTTGGCCGAACACACTTTAGGTACAGAGTATGATGGCAAAGACAATCTACTTTATAATTATGTTGATAAATTGCCTGATAAGCCAGGCAAGAATGGATCCATTGACGATTGTGAATTGGCTTTTAGAATGGGAGTATCATCTAGAGATTTTCCTCAATATTCCATTCATCATAACAAGGCAAATGATGCATGGAAATCTGAAGATGTGATGTATCCTGCTAGGTGCATACCAGATGAAAATGAAACTTGCATACAGCGTGCAACACCTGCTCTGGATTTTGTACAAGTTGATAAGCTGTTAACTGTTCAGCGTGCAGCACGGAAAACTAAAAAGCCCAGGCATGGAGTTATGGCTTATGAAGGGGATGGTGATTGGGAGATCTTGGCAGATGAGTCTGACTTTCTTGAAAACAATCGTACCATTGAATATGATCATGGTTTTAGGGGAAGAAGTGATTCTGGTCTTAATATCGGTAAGGATGTTGGAACTGGTGGGGCAGCTGCAATATCGGTGGGACTGAAAGCGCATGCAGTGGGTCTCATTGAAAAAATTAAATTTAAGGAGGTCTTAAAACGCAAGGGTGGGCTTCAAGAGTATCTGGAATGCAGGAACCTAATCTTAGACCTCTGGTTTAAAGATGTTACTCGTATTCTGCACCTTGATGATTGCGGGATCGCAAATACTATCTCAACAGATGGACATTCATGTGCTTCCCTTGTTAGAGAGATCTATTCATTTCTCGATCAAAGTGGTTATATTAATTTTGGTATTGCGTCAGAGAAGGATACATCAGAACCAAATCATAATTATACAGTTCTCAAAGAAAGAAAGAACAGAGATGTTACTGATTCTTTGGCTGCCGACATGGAGGATGGAATTTCATTTATTATCGGCCACGTTCAAAGTTCTGTGGCATCTATGGAGGCCAAGATTGGTGTTAAATTTGATGTGGAAGAACCGTTGGAAGCTATCCAAGGAAGAGACTTGACTTCTGCTGTTAAGTCAGAAATTCGAAACGGGGATGAGCTTGAAAAAGATAATGCTTGTCTAGAAGACAACAATGATATTGTAAAAGAATCCAACGCATTAATTAGTGAGAATGTGTCAAGAAGTGATCCATCTTGTGACATAATAGATTGTAAGTCTTTACCTAGCTCGATTCCTGATATGACAAATGTCTTTCCAAGTATTCATTCTTCCTCTGGAAACCACAAAGGTGGAAATCATTATTATCGGCCTAATGTAGAAATTGGAAAGAGAATCATCGTCATAGGGGCTGGTCCTGCTGGATTAACTGCTGCACGGCATTTGAAACGTCAGGGGTTTACCGTCACAATACTTGAAGCCAGAAGTAGAATAGGTGGTCGTGTGTACACTGATTGCAGTACTTTTTCAGTTCCTGTGGATCTTGGTGCAAGCATTATTACAGGTGTTGAGGCTGATGTTGCGACTGAAAGAAGACCTGATCCGTCCACATTGGTTTGTTCTCAGCTGGGTCTGGAGTTGACTGTCCTAAAGAGTGACTGCCCCCTCTATGACATTGTAACATGTCAAAAAGTTCCAGCTGATGTGGATGAAGCATTGGAAGCTGAATACAACAGTCTTCTTGATGACATGGTATTACTTGTTGCACAAAAGGGAGAACATTCAATGAAAATGTCGCTTGAGGAAGGTTTAGAATATGCTCTTGAGCGGCGCCGTATGGCACAATTAGGCAGGGAGATTGAAGAAAAGATGCTGAAAAATTCTACAGACACTTTATCTAGTTGTAAAAGTGTTCCTGAGAGCAAGTGTTTTAAGGAAGAGATTTTGACTCCCCTTGAGAGGAGGGTCATGGACTGGCATTTTGCTAACTTGGAGTATGGTTGTGCTGCTTTGCTCAAGGAAGTTTCTCTTCCAAACTGGAATCAGGATGATGTTTATGGGGGTTTTGGAGGAGCTCATTGTATGGTCAAAGGGGGTTATAGCACTGTTATTGAGTCACTTGGAGAAGGACTTTGCATCCATCTGAATCATTTAGTAACGGATATTTCTCATGATTTGCGGATTGCTTCCTCATGTGATGATCCTACTGGGGCAGTTAAAGTTTCCACCTCAAATGGCAGCGTGTTTCTTGGAGATGCTGTCTTGGTCACAGTTCCTCTTGGGTGCTTAAAAGCAGAAACCATAAAGTTTTCTCCACCATTACCCCATTGGAAGCATTCTTCCATTCAACGCCTTGGTTTTGGAGTTCTCAATAAAGTTGTTTTGGAATTTCCTGAAGTCTTTTGGGATGACTCCGTTGATTACTTTGGAGCAACTTCTGAGGAAACAAACTGGAGAGGTCAGTGCTTTATGTTCTGGAATGTTAGGAAAACTGTTGGTGCTCCTGTTCTGATAGCTTTAGTTGTTGCTTTGGTACCTGATCCAGTTGCATCTACAGTAACTGAGTGGGGCAAGGATCCTTTTAGCTACGGTGCTTATTCATATGTTGCAGTTGGAGCATCTGGGGAGGATTATGATATTTTGGCCAGGCCTATTGGGAACTGTTTATTTTTTGCTGGTGAAGCTACTTGCAAGGAGCATCCTGATACTGTTGGTGGTGCAATGATGAGTGGTCTTCGGGAGGCAGTACGTATTATCAATGTATTGAATACAGGATATGATTGCATTGCCGAAGTCGAGGAAATGGAGGCTGCTCAAAGACAATCTGATGGTGAAAAGGATGAATACAAGGACATATTAAGGAGACTTGATGCAGTTGAGCTTTCTAATGACCTGTATTATAAATCTCTTGGCACTGGCACAATTATGACGCGGGAAAATTTACTAGAGAATATGTTCTTTAATGCTAAAACCACGGCAGGACGGTTGTGTCTGGCAAAGGAGTTGCTGAATCTTTCTGTTGAAACATTTAAGTCATTTGCTGGGACCAAAGAAGGGCTTACTGTGCTCAATTCTTGGATACTGGATTCAATGGGGAAAGATGGGACCCAACTTTTGAGGCACTGTGTCCGACTTCTTGTGGTCGTTTCAACTGATCTTCTTGCTGTGCGTTTGTCTGGCATTGGGAAAACTGTCAAAGAAAAGGTTTGTGTACATACAAGCCGTGACATTCGGGCCATTGCAAGTCAGTTGGTTAGTGTCTGGCTTGAAGTTTTTCGTAAAGAAAAAGCTTCAAATAGTGGAATGAAATTGAGGCCAGCAATGACTGTTGAATCTTCAAAACGAAAATATCTTAAAGATTCTTCTCGGAAGCCCCCTTTGCATTCCAATTCTGGTGGCCAGGAAGGATCATTGAGTGAGGTGGATGGAGAGGAGGAAGGTGATGATGCTGCTATTTCTGAAGAAGAACACGCTGCATTTGCTGCTGCTGAAGCAGCCCGTGCAGCACTTGCAGCTGCAGAGGCACATGCATTTTCAGATGCGAAGTGCAATACAACATTGCAGCTTCCAAAGATACTCTCGTTTCGTAAATTTGCTAGACGAAAGCAATATGATCAGAGAGGTGAATGTGATATTCGGATGAGGTGCTCTGGCAGTATTTTGGGAAAACAAGATAGTATATCAGAAATAGACTCAAGAAATTGCAAAATAAGAAACTGGTCTGTTGACTTTTCTGCTGCTTGTGTCAACCTTGATAGTTCAAGACTATCTGTGGATAATCTCTCTCTGAAAAGCCATTCCAATGAAATTATTAGTCAGTTAAACTGTAGGGAGCACTCAGGAGAAAGCATGGCCGTGGAGAGTAGCATTTATACAAAAGCGTGGGTTGATACTTCTGGTAGTGAGGGGATCAAGGACTATCACGATATTGAGAGATGGCAATCGCAAGCAGCAGCAGCCAGTAATAATTTCTTCTGGCCACACAGCCATATAAAGGACGAGGAGGATTCAAATGCCACTTTGAAGGAAGCAACTTGGAATAATAAAGTAGTGAATCAAAGCTCAGTTTCACAAGTTACAATGACTAAGGATTATGTAAAACAAGATTATCCCCGAGGAGCAGAGAAAATTAAACAGGCCGTTGTAGATTATGTTGCAACATTGTTAATGCCTCTTTATAAAACAAGGAAAATTGACAAGGAGGGATACAAGTCAATAATGAAGAAAAGCGCCACTAAGGTCATGGAGCGGGCTACAGATGCAGAAAAAGCTATGGCTGTTCATGAATTTCTTGATTTGAAACGAATTGAGGAGAATGTCGAAAAAGGTTCCAAGTTCCACAATATCTTGCCCTCTGGCGTCGGAGGTTGGGTCGTCGTCAACTGCTCCGCCAGCAAGTGGGCTGAGCGCCTGCTTGGCGATTTCCAGTTTCTCGGAGAACCCTCTTCGGAACAGCACATTCTCTGTCCTCCCACTTTCTCTTCTCCACTTCCTTTTCCCGGGCGCAACTTATCGATCCCGCACGACTTCTATTGGATTCTTCAAGCCGCTTGCAAGAGCGTTGCTGATTCTGGTTCCGGAGAGATTACAATCAAAGTCTCGTCGAAGACCAAGATTGTACGATCTTTACTCAAGTTCCATTCGACAAGGTTCCTGGTGCTTTATGTGTCTTGCAAAAAACTGGGGGAGACAGAGCTGGAGGAAGGGGCCAGTATCCTTGCACCAGATTTAGAAGCACAGATTGATGGAAGGAACAAAGGGACTGTTGGTGGAGGCGGAGCTGCTGGTGGTGGTGGTGGTGGATTCACTCATGAAGATTCTATCGAATCGGAGCATTGA 5724 41.93 MDGEEMPMSAQRSQPNEGGLEPDDDEPIGYLFKLKKRRISTKPKLGMDNGVDRRKKAGIKGGKLVLEDGDFWGMDDTLASFRKKLKVPKKNIGTVRVRSSSSHTSGYSNPSTSELVGFRVPNVRLASMVKRNDEELSDVEPNISMDEWVEKKIKIEAKGLNSNLRTSGGNVECTNGAKSLDLCSLDSVLVGETMVEDQRLVKKFPQISNHIETSHNENQRSSHSQWIEKEAEEYLNRSNFKEESTLGHIGLDEACDRESQEFPCLQSRDGCPSSSQKNMTPKLNDGLKHCTGTKTRTLVNGALVTLHSCYEKKYIKEKQGVDRGILVSCCNEFSKQSANILAEHTLGTEYDGKDNLLYNYVDKLPDKPGKNGSIDDCELAFRMGVSSRDFPQYSIHHNKANDAWKSEDVMYPARCIPDENETCIQRATPALDFVQVDKLLTVQRAARKTKKPRHGVMAYEGDGDWEILADESDFLENNRTIEYDHGFRGRSDSGLNIGKDVGTGGAAAISVGLKAHAVGLIEKIKFKEVLKRKGGLQEYLECRNLILDLWFKDVTRILHLDDCGIANTISTDGHSCASLVREIYSFLDQSGYINFGIASEKDTSEPNHNYTVLKERKNRDVTDSLAADMEDGISFIIGHVQSSVASMEAKIGVKFDVEEPLEAIQGRDLTSAVKSEIRNGDELEKDNACLEDNNDIVKESNALISENVSRSDPSCDIIDCKSLPSSIPDMTNVFPSIHSSSGNHKGGNHYYRPNVEIGKRIIVIGAGPAGLTAARHLKRQGFTVTILEARSRIGGRVYTDCSTFSVPVDLGASIITGVEADVATERRPDPSTLVCSQLGLELTVLKSDCPLYDIVTCQKVPADVDEALEAEYNSLLDDMVLLVAQKGEHSMKMSLEEGLEYALERRRMAQLGREIEEKMLKNSTDTLSSCKSVPESKCFKEEILTPLERRVMDWHFANLEYGCAALLKEVSLPNWNQDDVYGGFGGAHCMVKGGYSTVIESLGEGLCIHLNHLVTDISHDLRIASSCDDPTGAVKVSTSNGSVFLGDAVLVTVPLGCLKAETIKFSPPLPHWKHSSIQRLGFGVLNKVVLEFPEVFWDDSVDYFGATSEETNWRGQCFMFWNVRKTVGAPVLIALVVALVPDPVASTVTEWGKDPFSYGAYSYVAVGASGEDYDILARPIGNCLFFAGEATCKEHPDTVGGAMMSGLREAVRIINVLNTGYDCIAEVEEMEAAQRQSDGEKDEYKDILRRLDAVELSNDLYYKSLGTGTIMTRENLLENMFFNAKTTAGRLCLAKELLNLSVETFKSFAGTKEGLTVLNSWILDSMGKDGTQLLRHCVRLLVVVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKASNSGMKLRPAMTVESSKRKYLKDSSRKPPLHSNSGGQEGSLSEVDGEEEGDDAAISEEEHAAFAAAEAARAALAAAEAHAFSDAKCNTTLQLPKILSFRKFARRKQYDQRGECDIRMRCSGSILGKQDSISEIDSRNCKIRNWSVDFSAACVNLDSSRLSVDNLSLKSHSNEIISQLNCREHSGESMAVESSIYTKAWVDTSGSEGIKDYHDIERWQSQAAAASNNFFWPHSHIKDEEDSNATLKEATWNNKVVNQSSVSQVTMTKDYVKQDYPRGAEKIKQAVVDYVATLLMPLYKTRKIDKEGYKSIMKKSATKVMERATDAEKAMAVHEFLDLKRIEENVEKGSKFHNILPSGVGGWVVVNCSASKWAERLLGDFQFLGEPSSEQHILCPPTFSSPLPFPGRNLSIPHDFYWILQAACKSVADSGSGEITIKVSSKTKIVRSLLKFHSTRFLVLYVSCKKLGETELEEGASILAPDLEAQIDGRNKGTVGGGGAAGGGGGGFTHEDSIESEH 1907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27131537 27142358 + BLOR04914 Blo12g00895 68156

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00895 1907 MobiDBLite consensus disorder prediction 1404 1418 - -
Blo12g00895 1907 Gene3D - 504 607 IPR036388 -
Blo12g00895 1907 SUPERFAMILY FAD-linked reductases, C-terminal domain 1081 1163 - -
Blo12g00895 1907 SUPERFAMILY FAD/NAD(P)-binding domain 758 1217 IPR036188 -
Blo12g00895 1907 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1311 1396 IPR035441 -
Blo12g00895 1907 ProSiteProfiles SWIRM domain profile. 504 604 IPR007526 GO:0005515
Blo12g00895 1907 Coils Coil 673 693 - -
Blo12g00895 1907 PRINTS Adrenodoxin reductase family signature 760 782 - -
Blo12g00895 1907 PRINTS Adrenodoxin reductase family signature 783 796 - -
Blo12g00895 1907 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 1139 1730 - -
Blo12g00895 1907 PANTHER LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 437 1138 - -
Blo12g00895 1907 Pfam Flavin containing amine oxidoreductase 769 1214 IPR002937 GO:0016491
Blo12g00895 1907 MobiDBLite consensus disorder prediction 1398 1445 - -
Blo12g00895 1907 Gene3D - 867 1137 - -
Blo12g00895 1907 Pfam SWIRM domain 516 595 IPR007526 GO:0005515
Blo12g00895 1907 Gene3D - 1170 1212 IPR036188 -
Blo12g00895 1907 PANTHER FLAVIN MONOAMINE OXIDASE 437 1138 - -
Blo12g00895 1907 SUPERFAMILY Homeodomain-like 506 600 IPR009057 -
Blo12g00895 1907 Coils Coil 1230 1250 - -
Blo12g00895 1907 Gene3D - 761 1079 IPR036188 -
Blo12g00895 1907 Gene3D - 1140 1169 - -
Blo12g00895 1907 MobiDBLite consensus disorder prediction 1 27 - -
Blo12g00895 1907 PANTHER FLAVIN MONOAMINE OXIDASE 1139 1730 - -
Blo12g00895 1907 MobiDBLite consensus disorder prediction 1879 1907 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00895 - - - mnt:21385577 1650.18
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00060 Blo-Chr4:504753 Blo12g00895 Blo-Chr12:27131537 1.00E-84 dispersed
Blo12g00895 Blo-Chr12:27131537 Blo17g00719 Blo-Chr17:21244016 4.11E-82 dispersed
Blo01g01586 Blo-Chr1:55682854 Blo12g00895 Blo-Chr12:27131537 0 transposed
Blo02g00862 Blo-Chr2:32945249 Blo12g00895 Blo-Chr12:27131537 3.26E-07 transposed
Blo03g00760 Blo-Chr3:32013227 Blo12g00895 Blo-Chr12:27131537 1.31E-55 transposed
Blo09g00033 Blo-Chr9:445165 Blo12g00895 Blo-Chr12:27131537 7.78E-06 transposed
Blo01g01585 Blo-Chr1:55666162 Blo12g00895 Blo-Chr12:27131537 3.48E-18 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1051 . Blo12g00895 Bda01g00502 . . Bpe04g00232 Bma04g00227 Bma01g02351 . . . . . . . . . Bhi04g00234 . . . . . . Cla08g01440 Cam08g1920 Cec08g1496 . Clacu08g1610 . Cre08g1396 . . . . . . . Cme03g01899 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004381 1 2 2 3 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 4 1 1 43
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
13063 PF01593 Amino_oxidase 1.70E-87 CL0063 Blo TR
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00895 Blo_Chr12 FPKM 51.631691 55.885784 82.692039 88.265167 47.708534 48.839542 47.076263 31.096794 30.131231 31.861872