Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00923 ATGGAGCTCTCTCTTCCGTCTTCCACAACCGCCATGGCTGGAGCTCTTTCATTTCTAGTGCTTCTCTACTCTCTGATAAAGATATTGAGGAGCTTCAATCGGAAGACACAACCTCCAGAAGCTGGCGGGGCGTGGCCTTTGATCGGCCACCTCCTCCTACTAAGAGGTACAAAACCAACACACTTCACCTTGGCTGCTATGGCTGACAAATACGGACCCGTCTTTACTATGAGATTGGGTGTTCATAAAACTCTGATTGTTAGCAATTGGCAGATTGCCAAAGAGTGTTTTACAGTACACGATCAGAATTTCGCCACTCGTCCAAAGCATTTAGCTTTTGAGCTCTTAGGCTATGACTACATCATGATAGGTTTCAGCCTTTATGGACCCGTCTGGCGCCAAGTGCGAAAAATAGCTATCGTCGAGCTACTTTCGAGCCGCCGTCTGGGGATGCTCAAACACATCAGGGAATCCGAGGTTCAGCTCTCCATTAGAGAGATGTACGATTCGTGGGTGGGAAAGAGATACACTGATGAACACGTAGTGAAAGTGGAGATGAAGAGGTGGTTTGGGGATGTTGCTTTGAACATGATATTTAAGATGGTGGTAGGACAGAGATTCACAGAGCTTTTTAAAGGTGAAAAAATCAACCAGAGTCTTCGAGCCATGAGGGATTTCTCTAATCTGTCGGGAGCATTTGTACCGGCTGATTATTTCCCGTTTCTGAGATGGTTAGATATTGGAGGGTTCGAGAAGGCCATGAAAAAGACGGCGGAAGAACTGGATCAACTCATTGAAAAATGGCTTCACGAGCATAAGCAGAGTAGAAATGCGGAAAAGTCTAAAGCCGAGCAAGACTTTATGGATGTCATAGTATCCCTTTTCTATGGCGGCGAGCATGGCGGAGATGATTCCAGTCGGAATCATGAATCTGACAGAATAATCAAAGCTACTTGTTGGGCTATGATATTAGCTGCCTCAGACACGACGGCAGGGACAATGACATGGACGCTCTGTTTACTTCTCAACAACGAACGAGTCCTCAAAGAAGCCCAGCGCGAGCTAGATGAACAAGTTGGGGATCAAAGACAAGTAAACGAATCTGATCTCAGAAACTTGGTTTACCTGAATGCAATCATAAAAGAGAGCATGCGTTTATATCCAGTCACGCCACTTGCAATTCCACATGAGTCCATGGAAGACTGCACCATCGCCGGCCACCACGTTCCGGCCGGAACGCGGCTAATGGTCAACTTGTGGAAGATGCACCGTGACCCGGGAATATGGAAGGAACCAGAGGAGTTCCGACCAGAGAGATTTCTGACCACCCACAAGGATGTGGACATGAGCGGTAAGAATTATGAATTAATGCCATTTGGAAGTGGAAGAAGAATGTGCCCTGGTGTTTCATTGGCTCTGCAAACTATGCTGCTTACAATGGCTACTTTGCTGCATGGATTTGAAATATCGAGGTTCTCAGAAGAAACGTTGGACTTGCGCCAGAGCTCAGGACTAACAAGCATTAAAGAAACGCCGCTGGAGATATACGCAAAACCACGGCTTGCTCGTCATCTCTATGCCTAG 1584 46.72 MELSLPSSTTAMAGALSFLVLLYSLIKILRSFNRKTQPPEAGGAWPLIGHLLLLRGTKPTHFTLAAMADKYGPVFTMRLGVHKTLIVSNWQIAKECFTVHDQNFATRPKHLAFELLGYDYIMIGFSLYGPVWRQVRKIAIVELLSSRRLGMLKHIRESEVQLSIREMYDSWVGKRYTDEHVVKVEMKRWFGDVALNMIFKMVVGQRFTELFKGEKINQSLRAMRDFSNLSGAFVPADYFPFLRWLDIGGFEKAMKKTAEELDQLIEKWLHEHKQSRNAEKSKAEQDFMDVIVSLFYGGEHGGDDSSRNHESDRIIKATCWAMILAASDTTAGTMTWTLCLLLNNERVLKEAQRELDEQVGDQRQVNESDLRNLVYLNAIIKESMRLYPVTPLAIPHESMEDCTIAGHHVPAGTRLMVNLWKMHRDPGIWKEPEEFRPERFLTTHKDVDMSGKNYELMPFGSGRRMCPGVSLALQTMLLTMATLLHGFEISRFSEETLDLRQSSGLTSIKETPLEIYAKPRLARHLYA 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27421071 27422732 - BLOR04942 Blo12g00923 68184

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00923 527 Pfam Cytochrome P450 41 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PANTHER CYTOCHROME P450 82C3-RELATED 35 526 - -
Blo12g00923 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Blo12g00923 527 Gene3D Cytochrome P450 30 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 Coils Coil 247 267 - -
Blo12g00923 527 PANTHER CYTOCHROME P450 35 526 - -
Blo12g00923 527 Coils Coil 348 368 - -
Blo12g00923 527 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00923 527 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00923 - - - twl:120009306 602.438
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo05g00683 Blo-Chr5:22816991 Blo12g00923 Blo-Chr12:27421071 1.01E-124 dispersed
Blo12g00923 Blo-Chr12:27421071 Blo12g00926 Blo-Chr12:27455219 0 dispersed
Blo12g00928 Blo-Chr12:27468167 Blo12g00923 Blo-Chr12:27421071 1.51E-49 dispersed
Blo12g00922 Blo-Chr12:27405958 Blo12g00923 Blo-Chr12:27421071 0 tandem
Blo12g00923 Blo-Chr12:27421071 Blo12g00924 Blo-Chr12:27426084 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g857 . Blo12g00923 Bda01g00555 Bda03g00240 Bpe02g00413 . . . . . . Cma09g00183 . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01624 Csa03g04166 Chy04g00549 . . . . . . . . . . Cmo01g01943 Cmo09g00179 . . . Car09g00162 . . Bhi09g02056 . . . . . . . . . . . . . . . . Cme04g00637
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000018 15 22 15 12 7 19 2 17 20 14 15 18 14 11 26 20 19 10 1 20 12 9 8 16 8 19 17 19 17 20 442
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00923 Blo_Chr12 FPKM 34.809822 36.182262 44.479397 45.43515 13.183208 14.341633 13.852015 4.843369 4.019013 4.473175