Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00927 ATGAGCGGTAAGAATATTGAATTAATGCCATTTGGAAGTGGAAGTAGAATGTGCCCTGGTTTTCCATTGGCTCTGCGAACTATGCTTCTTACAATGGCTGTTTTGCTGCATGGGTTTGAAATATCGACGTTCTCAGAAGAAACATTGAACATGAGTGAGGGCTCAGTAGCAGTTGGGATAGCCCTCCTTCTTTCCTTCTGTTTTTCACCATGGTGGGGTTCTGCTAAACGCAGAATAGCGCCGGAAGTGCCAGCAGGATGGCCCATAATTGGTCATTTGTTAAAGCTCGGAGGGTCGACTCCTCCCCACAAAGCTTTAGGAGCCATGGCCGATAAGTGTGGGCCGATTTTCACCATTCGTCTCGGTCTGCACTCTGTGCTGGTGGTGAATAATTCAACTCTTGCGAAGGAATGCTTGAGGCTCAACGAGGCAGCCCTATTCGATCGCCCACGGGGATTAGCTTTTAAAATCTTGACCTATAACTATGCTATTTTTGGCTTTTCAAACAACGTTTCATACTGGCGGGAAGTGCGTAAGGTTACAACGTCGGAATTTTTCTCAAACCGCCGGCTCAACTTGCTCAAGCACGTAAAGGCCTTGGAGGTGGACACATGGATAACTGAACTACATGACACTTGGTCGGCTGAGAAAGTTAAAGACTCATCGTCCACGGTTATGGTGGAGCTGAAAGAATGGTTCACCAATTTGACGTTTAACATAGTTTTAAAGATACTAGTTGGGAAGCGCTACTTTGGTTCAAGGAGAGAAGGAAACGAGGAAGAAGCAGGAAGGTTTTCGAAAGCACAGAAGAGTTTCTTCCGTAATCTGGGGATGTTTATCGTTTCCGATTGTATTCCTTTCCTTGCCATGTTTGATCTCGGAGGACACCAAAAGGCTATGAAAAAAGTAGCGGAAGAAATGGACATCGTCCTTGAAGGTTGGCTGGAAGAGCACAAGCGAAGGAGAGATACAGGTGTGTCTGAAACTGACAAAAACTTCATGGACGTAATTCTCTCCAGTCTTGACGGCAAAGACCTTCATGGTTATGATGCAGATACAATCGCAAAGGCCACAATTTTGGGTCTAATTGCAGGGGCTAGTGATACTACCGCAGTAACTCTAACTTGGGTAATATCATTATTGCTTAATAACCCTCAAACTTTGAAAAAGGTACAGACAGAAATAGACGAAGTGATTGGTGGAGACAGAGTAGTGAATGAGTCAGATATAGGCAACCTGGTTTACGTTCAGGGAGTTTTGAAGGAAACAATGCGTTTATACCCAGCAGCGCCGCTTGCTGGAGCCCGCGTCTTCACCGAAGATTGTGTTGTCGGAGGCTACCATGTCCGGAAGGGAACGCGATTGATTCCAAATCAGTGGAAGATCCAAACTGATCCAGAAGTTTGGTCGGAGCCAATGGAGTTCAAGCCTGAGAGGTTTCTGACGACCCACAAGAACATTGACGTAAGAGGAAGCCACTATGAACTGATTCCGTTTGGAAGTGGAAGGCGAATGTGTCCAGGAATGAATTTTGCGATGCAAACGGTGCCCTTGGCTCTAGCTAGGTTCTTACAAGAATTCGAGATACAAAATCCATGGAAGCAGCCAGTAGACATGACAGAAAGCTCAGGTTTTACCAACATGAAAGTCTCTCCGCTTGAAGTTCTCATCACTCCTCGCTTCTCTGCAAATATTTTGAACTGA 1704 45.54 MSGKNIELMPFGSGSRMCPGFPLALRTMLLTMAVLLHGFEISTFSEETLNMSEGSVAVGIALLLSFCFSPWWGSAKRRIAPEVPAGWPIIGHLLKLGGSTPPHKALGAMADKCGPIFTIRLGLHSVLVVNNSTLAKECLRLNEAALFDRPRGLAFKILTYNYAIFGFSNNVSYWREVRKVTTSEFFSNRRLNLLKHVKALEVDTWITELHDTWSAEKVKDSSSTVMVELKEWFTNLTFNIVLKILVGKRYFGSRREGNEEEAGRFSKAQKSFFRNLGMFIVSDCIPFLAMFDLGGHQKAMKKVAEEMDIVLEGWLEEHKRRRDTGVSETDKNFMDVILSSLDGKDLHGYDADTIAKATILGLIAGASDTTAVTLTWVISLLLNNPQTLKKVQTEIDEVIGGDRVVNESDIGNLVYVQGVLKETMRLYPAAPLAGARVFTEDCVVGGYHVRKGTRLIPNQWKIQTDPEVWSEPMEFKPERFLTTHKNIDVRGSHYELIPFGSGRRMCPGMNFAMQTVPLALARFLQEFEIQNPWKQPVDMTESSGFTNMKVSPLEVLITPRFSANILN 567
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27460601 27462941 - BLOR04946 Blo12g00927 68188

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00927 567 PANTHER CYTOCHROME P450 82A2 63 565 - -
Blo12g00927 567 PANTHER CYTOCHROME P450 82A2 2 54 - -
Blo12g00927 567 SUPERFAMILY Cytochrome P450 84 560 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PANTHER CYTOCHROME P450 82C3-RELATED 2 54 - -
Blo12g00927 567 Gene3D Cytochrome P450 2 59 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 SUPERFAMILY Cytochrome P450 4 53 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 374 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 236 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 417 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 506 529 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 496 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 354 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS E-class P450 group I signature 458 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PANTHER CYTOCHROME P450 82C3-RELATED 63 565 - -
Blo12g00927 567 PRINTS P450 superfamily signature 497 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS P450 superfamily signature 365 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS P450 superfamily signature 506 517 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 11 20 IPR017972 GO:0005506|GO:0016705
Blo12g00927 567 Gene3D Cytochrome P450 74 565 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 499 508 IPR017972 GO:0005506|GO:0016705
Blo12g00927 567 Pfam Cytochrome P450 4 55 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00927 567 Pfam Cytochrome P450 81 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00927 - - - csin:114277421 584.719
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo06g00089 Blo-Chr6:3543252 Blo12g00927 Blo-Chr12:27460601 2.10E-08 dispersed
Blo12g00927 Blo-Chr12:27460601 Blo12g00930 Blo-Chr12:27484682 1.77E-07 dispersed
Blo12g00933 Blo-Chr12:27530265 Blo12g00927 Blo-Chr12:27460601 1.30E-08 dispersed
Blo12g00926 Blo-Chr12:27455219 Blo12g00927 Blo-Chr12:27460601 1.83E-21 tandem
Blo12g00927 Blo-Chr12:27460601 Blo12g00928 Blo-Chr12:27468167 2.91E-24 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g850 . Blo12g00927 . Bda03g00236 . . Bma04g00188 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01616 Csa03g04161 Chy04g00555 . . . . . . . . . . . Cmo09g00183 . . . . . . Bhi09g02035 . . . . . . Cla05g01983 . . . . . . . . . Cme04g00662
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000018 15 22 15 12 7 19 2 17 20 14 15 18 14 11 26 20 19 10 1 20 12 9 8 16 8 19 17 19 17 20 442
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00927 Blo_Chr12 FPKM 0.0 0.0 5.573845 0.0 0.0 0.0 5.873281 2.17708 2.643091 0.0