Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00930 ATGGATTTCGTCTTTTCTTTTTCGAAACCTGTAGTAGCAGTTGGGATAGCCCTTCTTCTTTCCTTCTGTTTCTCACGAAGGTGGGTTTCGGCTAAGCGCAGAACAGCGCCGGAAGTGCCAGGAGGATGGCCCATAATTGGTCATCTGTTAAAGCTCGGAGGTTCGACGCCTCCCCACAAAGCTTTAGGAGCCATGGCCGATAAGTGTGGGCCGATTTTCACCATTCGTCTTGGTCTGCACTCTGCGCTGGTGGTGAATAATTCAACTCTGGCGAAGGAATGCTTGGGGCTCAACGAGGCAGCCCTGTTCGATCGCCCACGGGCATTAGCTTTAAAAAGCTTGACATATAACTATGCTCTTTTTGCCTTTTCAAACAACGTTCCATACTGGCGGGAAGTGCGTAAGATTACAACGTCGGAATTTTTCTCAAACCGCCGGCTCAACCTGCTGAAGCACGTAAAGGCCTTGGAGGTGGACACATGGATAACTGAACTCCATGACACTTGGTCGGCTGAGAAAGTTAAAGACTCGTCGTCTCCGGTTATGGTGGAGCTGAAAGAATGGTTTACCAATTTGACGTTTAACTTAATTTTAAAGATACTAGTCGGGAAGCGCTATTTTGGTTCAAGGAGACAAGGAAATGAAGAAGAAGCAAGAAGGTTTTCGAAAGCACTGGAGAGTTTCTTCCGTTATCTGGGTATGTTTATAGTTTCCGATTTTATTCCATTCCTCGCCATGTTTGATCTCGGAGGACACCAAAAGGAGATGAAAAAAGTAGCGGAAGAAATGGACTGCGTCCTTGAAGGTTGGCTGGAAGAGCACAAGCGAAGGAGAGATACAGGTGTGTCTGAAACTGACAAAAACTTCATGGACGTAATTCTCTCCAGTCTTGACGGCAAAGACCTTCATGGTTATGATGCAGATACAATCACAAAGGCCACAATTTTGGGTCTAATTGCAGGGGCCAGTGATACTCCCGCAGTAGCTCTAACTTGGGTAATATCATTATTGCTTAATAACCCTCAAACTTTGAAAAAGGTACAGACAGAAATAGACGAAGTGATTGGTCGAGACAGAGTAGTGAATGAGTCAGATACAGGCAACCTTGTTTACGTTCAGGGAGTTGTGAAGGAGACAATGCGTTTATACCCACCAGGGCCGCTCGCTGGAACACGCGTCTTCACCGAAGATTGTGTTGTCGGAGGCTACCATGTCCGGAAGGGAACGCGATTGATTCCAAATGTGTGGAAGATCCAAACTGATCCAGAAGTTTGGCCGGAGCCGATGGAGTTCAAGCCTGAGAGGTTTCTGACGACCCACAAGAACATTAATGTAAGAGGTAACCACTATGAACTGATTCCGTTTGGAAGTGGAAGACGAATGTGTCCAGGAATGAATTTTGCGATGCAAACGGTGCCCTTGGCTCTAGCTAGGTTTTTACAAGAATTCGAGATACAAAATCCATGGAAGCAGCCAGTAGACATGACAGAAAGCTCAGCTTTTACCAACATGAAAGTCTCCTCGCTTGAAGTTCTCATCACTCCTCGCTTGAGGTTAACGTCCGATTGA 1569 46.21 MDFVFSFSKPVVAVGIALLLSFCFSRRWVSAKRRTAPEVPGGWPIIGHLLKLGGSTPPHKALGAMADKCGPIFTIRLGLHSALVVNNSTLAKECLGLNEAALFDRPRALALKSLTYNYALFAFSNNVPYWREVRKITTSEFFSNRRLNLLKHVKALEVDTWITELHDTWSAEKVKDSSSPVMVELKEWFTNLTFNLILKILVGKRYFGSRRQGNEEEARRFSKALESFFRYLGMFIVSDFIPFLAMFDLGGHQKEMKKVAEEMDCVLEGWLEEHKRRRDTGVSETDKNFMDVILSSLDGKDLHGYDADTITKATILGLIAGASDTPAVALTWVISLLLNNPQTLKKVQTEIDEVIGRDRVVNESDTGNLVYVQGVVKETMRLYPPGPLAGTRVFTEDCVVGGYHVRKGTRLIPNVWKIQTDPEVWPEPMEFKPERFLTTHKNINVRGNHYELIPFGSGRRMCPGMNFAMQTVPLALARFLQEFEIQNPWKQPVDMTESSAFTNMKVSSLEVLITPRLRLTSD 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27484682 27486328 - BLOR04949 Blo12g00930 68191

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00930 522 SUPERFAMILY Cytochrome P450 40 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PANTHER CYTOCHROME P450 82C3-RELATED 14 518 - -
Blo12g00930 522 Gene3D Cytochrome P450 27 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Blo12g00930 522 PANTHER CYTOCHROME P450 82A2 14 518 - -
Blo12g00930 522 Pfam Cytochrome P450 37 502 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00930 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00930 - - - qsu:112023929 592.808
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00927 Blo-Chr12:27460601 Blo12g00930 Blo-Chr12:27484682 1.77E-07 dispersed
Blo12g00930 Blo-Chr12:27484682 Blo12g00935 Blo-Chr12:27532552 6.55E-172 dispersed
Blo12g00934 Blo-Chr12:27531024 Blo12g00930 Blo-Chr12:27484682 2.54E-102 dispersed
Blo12g00929 Blo-Chr12:27475203 Blo12g00930 Blo-Chr12:27484682 0 tandem
Blo12g00930 Blo-Chr12:27484682 Blo12g00931 Blo-Chr12:27516240 1.03E-175 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g845 . Blo12g00930 . . . . . . . . Cma01g01880 Cma09g00191 . . . . . . . . . . . . . . . . . . . . . . . . Csa03g04158 Chy04g00559 . . . . . . . . . . . Cmo09g00186 . . . . . . Bhi09g02031 . . . . . . Cla05g01987 . . . . . . . . . Cme04g00668
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000018 15 22 15 12 7 19 2 17 20 14 15 18 14 11 26 20 19 10 1 20 12 9 8 16 8 19 17 19 17 20 442
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g00930 Blo_Chr12 FPKM 28.502575 33.989216 35.297417 36.952728 13.576766 16.552418 13.313957 9.48635 8.38872 8.823109