Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00935 ATGGATTTTTCACTTGACCTCACTCTCATTGCTCTTTTCTTTCCTCTGCTTCTAGTCTATTATGTTTTGATTGGTGCAAGGCAGAGCAAGAGCTCGGAGGCTCCAGAGCCCAATGGGGCATGGCCAATTATTGGCCATCTCCACCTTCTTGGCGGCCGAGATCAGCTTCTCTACCGCACACTTGGAGCCATGGCTGATGAGTATGGCCCAACTTTCAATATCCGCCTTGGCAGCCGCCGTGCATTTGTTGTTAATAGCTGGGAAGCGGCCAAAGACTGTTTCACTGCCAATGACAAGGCGCTCGCTTCACGCCCAACCACAGTGGCTTCAAAGCTAATGGGTTACAACCATGCTATTTTCGGGTTTGCGCCATATAATGCTTTTTGGCGCGGGATGAGAAAGATTGCCACTCTTGAACTTTTATCAAATCGTAGGCTCGAATTGCTCAAACATATCAGAGCTTCTGAAATTGACACCGGGATGAGAGATTTGTACAATTTATGCGTCCAAAATGGGTCGAAGCCTATGGCTGTGGAGCTTAAAAGTTGGTTAAGTGACTTGACACTTAATGTGGTGGTTCAAATGGTGGCAGGGAAGCGATATTTCGGCTCCTCTGCTGATGTTTCCGGTGACGAGGGTAGACAGTGCCAAAAGGCAATCAGTCAATTCTTTCATCTGATTGGAATATTTGTCGTTTCAGATGCCATTCCATCCCTGGGGTGGCTCGATTTTAATGGCCATGAGAAGGCCATGAAGAAGACGGCCAAAGACCTCGACGCAATACTTGAAGGGTGGCTGGAGGATCATCGCAGACGAAGGAGGGAGTCTCGTGAGGTGAATTCGGAGGGCGATCAGGACTTCATTGACGTGATGTTATCTCTTCAGAAGGAAGGGAAGCTCTCAGATTTTGAACACGATTCAGATACTTGTGCACTCATTCTTGGCGGCAGCGACACCACATCAGGCACGCTCACATGGGCCATCTCATTACTCCTCAACAATCCTCATCTGTTGCAAAAGGCGAAAGAAGAGCTTGATACTCACGTTGGCGAAGACCGGAAAGTTGAAGATTCGGACATAAAAAACCTGGTGTATCTTCAAGCTATCATCAAAGAAACTCTGAGATTATATCCAGCGGGTCCGCTCCTAGGACCAAGGGAAGCCATGGAAGACTGTAAAGTAGCAGGGTACAACGTGAAGGCAGGGACTAGACTGGTTGTAAATGTATGGAAGATTCAAAGGGATCCAAGGGTTTGGGAGAAACCGACCGAATTCATTCCAGAAAGATTTCTGACTACCCATGAGAGTGTGGATGTAAAGGGTCAACATTTCGAGCTGATGCCGTTCGGGTCAGGAAGAAGGTCCTGCCCCGGTTCCACGTTTGCCCTGCAAGTCCTTCACTTGACTCTTGCTCGTCTGCTTCATGCTTTTGAATTCTCCACTCCATCGAAGCAGCCTGTGGACATGACAGAGAGCCCTGGTTTGACGATTCCAAAAGCCACTCCTTTGGACGTTCTGCTCACTCTCCGCCCCGCCGCAAAACTCTACGGCAGCCGATGA 1560 48.72 MDFSLDLTLIALFFPLLLVYYVLIGARQSKSSEAPEPNGAWPIIGHLHLLGGRDQLLYRTLGAMADEYGPTFNIRLGSRRAFVVNSWEAAKDCFTANDKALASRPTTVASKLMGYNHAIFGFAPYNAFWRGMRKIATLELLSNRRLELLKHIRASEIDTGMRDLYNLCVQNGSKPMAVELKSWLSDLTLNVVVQMVAGKRYFGSSADVSGDEGRQCQKAISQFFHLIGIFVVSDAIPSLGWLDFNGHEKAMKKTAKDLDAILEGWLEDHRRRRRESREVNSEGDQDFIDVMLSLQKEGKLSDFEHDSDTCALILGGSDTTSGTLTWAISLLLNNPHLLQKAKEELDTHVGEDRKVEDSDIKNLVYLQAIIKETLRLYPAGPLLGPREAMEDCKVAGYNVKAGTRLVVNVWKIQRDPRVWEKPTEFIPERFLTTHESVDVKGQHFELMPFGSGRRSCPGSTFALQVLHLTLARLLHAFEFSTPSKQPVDMTESPGLTIPKATPLDVLLTLRPAAKLYGSR 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27532552 27534210 - BLOR04954 Blo12g00935 68196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00935 519 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 Pfam Cytochrome P450 35 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Blo12g00935 519 Gene3D Cytochrome P450 23 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Blo12g00935 519 PANTHER CYTOCHROME P450 82C3-RELATED 23 516 - -
Blo12g00935 519 SUPERFAMILY Cytochrome P450 35 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00930 Blo-Chr12:27484682 Blo12g00935 Blo-Chr12:27532552 6.55E-172 dispersed
Blo12g00931 Blo-Chr12:27516240 Blo12g00935 Blo-Chr12:27532552 0 dispersed
Blo12g00933 Blo-Chr12:27530265 Blo12g00935 Blo-Chr12:27532552 9.01E-74 proximal
Blo12g00934 Blo-Chr12:27531024 Blo12g00935 Blo-Chr12:27532552 9.67E-92 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00935 K23136 - qsu:112004233 759.214