Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g00963 | ATGGAAGGAGAGTTATGTTCTGGAGCTTCTTCTTCATCGTCTTCAACCTCTAGCACAGACCAGAAGATGAAGCGGAGGCAACTCCGGCGAGAAGAAAAGCCCTACAGAGGCATACGGATGAGGAAATGGGGAAAGTGGGTGGCCGAGATTAGAGAGCCTAATAAAAGGTCGAGGATTTGGTTGGGTTCTTACTCCACCCCCGTCGCCGCCGCTCGTGCGTACGACACCGCCGTCTTTTATCTCCGGGGCCCATCCGCTTCCTTGAATTTTCCGGAGCTCATAATTGGAGAAGAGCAGCCGGGAGATTTGTCCGCCGCCTCTATACGCAAAATCGCCACTGAAGTTGGGGCTAAAGTTGACGCCGTTCAAACAGCTCTTCATTCGTCGACGTCTGTTTCTACTCAGCCGCCGGGAAAGCCGGACTTGAACCAGTTTCCCAGCCCCGAAAGTTCAGACGAAGACTGA | 465 | 53.33 | MEGELCSGASSSSSSTSSTDQKMKRRQLRREEKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYSTPVAAARAYDTAVFYLRGPSASLNFPELIIGEEQPGDLSAASIRKIATEVGAKVDAVQTALHSSTSVSTQPPGKPDLNQFPSPESSDED | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 27757652 | 27758116 | - | BLOR04982 | Blo12g00963 | 68224 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g00963 | 154 | Pfam | AP2 domain | 35 | 83 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | ProSiteProfiles | AP2/ERF domain profile. | 34 | 91 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | SMART | rav1_2 | 34 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 10 | 152 | - | - | |
Blo12g00963 | 154 | PRINTS | Ethylene responsive element binding protein signature | 35 | 46 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | PRINTS | Ethylene responsive element binding protein signature | 73 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | SUPERFAMILY | DNA-binding domain | 34 | 92 | IPR016177 | GO:0003677 | |
Blo12g00963 | 154 | MobiDBLite | consensus disorder prediction | 126 | 154 | - | - | |
Blo12g00963 | 154 | Gene3D | AP2/ERF domain | 34 | 92 | IPR036955 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Blo12g00963 | 154 | MobiDBLite | consensus disorder prediction | 126 | 147 | - | - | |
Blo12g00963 | 154 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 10 | 152 | - | - | |
Blo12g00963 | 154 | CDD | AP2 | 35 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Blo12g00963 | 154 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo01g01521 | Blo-Chr1:54799376 | Blo12g00963 | Blo-Chr12:27757652 | 3.04E-85 | dispersed | |
Blo12g00963 | Blo-Chr12:27757652 | Blo18g00657 | Blo-Chr18:12325563 | 3.59E-72 | dispersed | |
Blo12g00962 | Blo-Chr12:27752920 | Blo12g00963 | Blo-Chr12:27757652 | 9.38E-108 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13078 | PF00847 | AP2 | 8.20E-12 | CL0081 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g00963 | K09286 | - | csv:101219005 | 208.379 |