Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00976 ATGTCTGAAAACTGTGTTCTTCTCATTCGCGGTGCAAAGAAGAGAGAGGCCGCGGCGAGAATGGCGGAAGAACCGTTGATTAAGAAGGAACGGGTCGTCTTAGGAGAGCTTCCTATTTTGCAGAATGCTAGTTTGCCTGTAGGTTTAAAGTCTGTCGAAAACTCGGAAAAGCAGAAATGTATGGTGAGGAAGAAGGCGAACACAAAATGTTCGAGGAAAGCAACAAAAAGCAAAGCTAAAATAGCAAAGGATGTCAGTTTGAAATTGGGAAATGATCCGGATTCGGACGACCCTCGAATGTGCCGTTCTTATGCTACAGATATTTATGACTATCTTCACAAAATGGAGATGGAACCGAAAAGAAGGCCACTCCACGATTATCTTGAGAAAATTCAGAAGGATGTCACTGCTAATATGCGAGGGGTGTTGGTCGATTGGTTGGTAGAGGTCGCCGAAGAGTACAAACTCTGTTCAGATACTCTTTATCTCTCCATCTCCTTTATTGATAGGTTCTTGTCATTGCACACTCTTAATCGACAAAGGCTTCAACTTCTTGGCGTTTCTGCCGTGCTCATTGCTTCTAAGTACGAAGAGATTAGCCCCCCACACGTAGAAGAGTTGTGCTATATCACGGACAATACTTACACAAAGGACGAAGTGGTGAAGATGGAGGCTGATTTGCTCAAATCTTTGAATTTCGAAACTGGGAATCCCACAACGAAGACATTCTTGAGACGGTTTATTAGTATTTCCCAAGAGCGTAATAATGCTCCCAACTCGCAGCTAGAGTTTCTGAGTTACTATCTTGCAGAATTAAGTTTACTGGACTACAATGTCTTAAAGTTCTTGCCCTCTTTGGTTGCTGCTGCTGTTGTTTTCATTGCAAAGTTCATACTTCAACCAAAGAATCACCCCTGGCCTCAATTGTTGGAACAATATTCTGGGTATAAATCGAATGAGTTGAAAGACTGTGTTCTCATGCTGCTTGACCTGTATCTGGGCAGAAGAGGAGGGTCTCTCGTAGCCATAAGAGAGAAATACAAGCAGCAGAAGTTCAAATGTGTGTCGGCTCTACCTTCGCCGCCGGAGATACCCGCTTTGTATTTTGAAGATGGGCGTAGTATCAAAGCAAAACTCAGCTTTTATGGCACTAATCATCTCGCCGGCCGTATAAACATCACTTCTGTTACTTTTCCGTTTATCTGCACAATGTCGGACGGTGATTCCGTGATCGTTCAGCGGCTTCATCCCCCATCTCAGGAGTCGTTGCCGAAATCGGCATCGAGAACTCGCGAAGCCGTCATTAACCGCCTCATAGAGACGCTCTCCACCAGCTCTGTCGTCTCTAAGTGCTATGGCACCATGCCTCTGGAGGAGGCCTCGGCCGCTGCACATCTCATTGAGGAGGCTTTCGTCGCTGCTGCTGGTGCCTGCGCAACTGAAGGTGATGGCATTGAGATCCTTAATTTGTATTCGAAGGAGATCAGCAAGCGGATGCTTGAGATGGTCAAGGCCAGAGCGTCTGCTGCTTCTGCAGAGGAAAACGGTGCGTTGCAGAAGGATGATTCATCTGTGATTTCAACTACCACCAGTATCAATCCAATCTACTGGTCGAAGGATGTAGGGGATGGTTGTTTCGGTTCTGCAGAGGCCATTGCATTTTGGTCATATACCCAAGAAACGTGGGAAGATGTGGATTTGAAGATGAAGGCAGATGAAGAAGATGAAATGGGTAGAGTTTCTGATGAAAGAGGGTTTCTTAATTTGGATGATAATCTGTTGTTTGAAGTATTTAAAACTGTGGATCCGAGGACGCTGGCTATGGCGGCCTGCGTTAGCAAGCAGTGGCACAAGACGGCGGAAGACGAACGGCTATGGGAGCTGATCTGCACCAGGCAGTGGAACAATATCGACCGCGGTAACCAACAGCTCCGGTCTGTTGTACTCGCTCTCGGCGGCTTTCGCCGTCTCCTTTCGCTCTTCATCTTTCCTCTGTCGAAGCCGCCGTCGTCTTTGTTAATATTGACTCTGTTTTTAAAAACTTCTTAG 2049 46.22 MSENCVLLIRGAKKREAAARMAEEPLIKKERVVLGELPILQNASLPVGLKSVENSEKQKCMVRKKANTKCSRKATKSKAKIAKDVSLKLGNDPDSDDPRMCRSYATDIYDYLHKMEMEPKRRPLHDYLEKIQKDVTANMRGVLVDWLVEVAEEYKLCSDTLYLSISFIDRFLSLHTLNRQRLQLLGVSAVLIASKYEEISPPHVEELCYITDNTYTKDEVVKMEADLLKSLNFETGNPTTKTFLRRFISISQERNNAPNSQLEFLSYYLAELSLLDYNVLKFLPSLVAAAVVFIAKFILQPKNHPWPQLLEQYSGYKSNELKDCVLMLLDLYLGRRGGSLVAIREKYKQQKFKCVSALPSPPEIPALYFEDGRSIKAKLSFYGTNHLAGRINITSVTFPFICTMSDGDSVIVQRLHPPSQESLPKSASRTREAVINRLIETLSTSSVVSKCYGTMPLEEASAAAHLIEEAFVAAAGACATEGDGIEILNLYSKEISKRMLEMVKARASAASAEENGALQKDDSSVISTTTSINPIYWSKDVGDGCFGSAEAIAFWSYTQETWEDVDLKMKADEEDEMGRVSDERGFLNLDDNLLFEVFKTVDPRTLAMAACVSKQWHKTAEDERLWELICTRQWNNIDRGNQQLRSVVLALGGFRRLLSLFIFPLSKPPSSLLILTLFLKTS 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27814784 27820291 - BLOR04995 Blo12g00976 68237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00976 682 Pfam Cyclin, N-terminal domain 107 234 IPR006671 -
Blo12g00976 682 CDD CYCLIN 139 228 IPR013763 -
Blo12g00976 682 SMART cyclin_7 145 229 IPR013763 -
Blo12g00976 682 SMART cyclin_7 242 330 IPR013763 -
Blo12g00976 682 SUPERFAMILY Cyclin-like 238 363 IPR036915 -
Blo12g00976 682 Pfam Cyclin, C-terminal domain 238 360 IPR004367 -
Blo12g00976 682 Gene3D - 107 357 - -
Blo12g00976 682 ProSiteProfiles F-box domain profile. 583 629 IPR001810 GO:0005515
Blo12g00976 682 CDD CYCLIN 238 329 IPR013763 -
Blo12g00976 682 PANTHER CYCLINS 22 372 IPR039361 -
Blo12g00976 682 ProSitePatterns Cyclins signature. 140 171 IPR006671 -
Blo12g00976 682 Gene3D WPP domain 416 515 IPR038214 -
Blo12g00976 682 Gene3D - 121 236 - -
Blo12g00976 682 SUPERFAMILY F-box domain 574 637 IPR036047 GO:0005515
Blo12g00976 682 Gene3D - 576 650 - -
Blo12g00976 682 PANTHER CYCLIN-A3-1-RELATED 22 372 - -
Blo12g00976 682 SMART Cyclin_C_2 238 361 IPR004367 -
Blo12g00976 682 SUPERFAMILY Cyclin-like 96 234 IPR036915 -
Blo12g00976 682 Pfam WPP domain 427 512 IPR025265 -
Blo12g00976 682 Pfam F-box-like 591 632 IPR001810 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00976 Blo-Chr12:27814784 Blo12g01089 Blo-Chr12:28551756 4.30E-95 dispersed
Blo15g00447 Blo-Chr15:6607700 Blo12g00976 Blo-Chr12:27814784 9.95E-10 dispersed
Blo18g00710 Blo-Chr18:16427279 Blo12g00976 Blo-Chr12:27814784 8.51E-36 dispersed
Blo12g00975 Blo-Chr12:27806235 Blo12g00976 Blo-Chr12:27814784 1.16E-62 tandem
Blo01g01512 Blo-Chr1:54687746 Blo12g00976 Blo-Chr12:27814784 5.53E-40 transposed
Blo02g00713 Blo-Chr2:22499692 Blo12g00976 Blo-Chr12:27814784 1.08E-41 transposed
Blo14g00370 Blo-Chr14:4024016 Blo12g00976 Blo-Chr12:27814784 2.98E-132 transposed
Blo14g00530 Blo-Chr14:7662425 Blo12g00976 Blo-Chr12:27814784 1.12E-116 transposed
Blo01g01510 Blo-Chr1:54659954 Blo12g00976 Blo-Chr12:27814784 0 wgd
Blo12g00976 Blo-Chr12:27814784 Blo04g00460 Blo-Chr4:3826943 1.71E-42 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00976 K06627 - zju:107420528 468.774