Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00987 ATGGAAAACTATTTACCTGGGAGTTTTGTGGAGGTGAAACCGAAAAATTCATCTGAGGAAGCGCTTCAGAGATGGAGGAATTTATGTTGGGTGGTGAAAAATAAGAAGCGGAGGTTTCGCTTCACTGCTAATCTCACCAAGCGCTCCGAGGCCCAGGATATCCGACGCACGAATAAGGAGAATTTTAGAGTTGCAGTTCTTGTTTCGCAAGCTGCCCTTCAATTTGTTGATGGTTTGGCTTTGTCGAAAGATTATACAGAACCTGAAGAGGTCAAAGCTGCCGGTTTTGGAATCGATGCTGAAGAACTTTCAACCATTGTCGATGGCCGGGATGTGAAGAAGCTTAAGATTCACGATGGAGTTGAGGGTATTGCAAAAAAGCTTTCTACATCACTAACCGATGGTATTTCTACTTCGGAGCAATCGATCAAGAAGAGAAAAGATATCTATGGAGTCAACAAGTTCACTGAAATCCCACCTCGTGGTTTTTGGGTTTTTGTGTGGGAAGCCCTTCAGGATATGACTCTAATGATACTTGGACTTTGTGCATTTGTCTCTCTTCTTGTAGGCATAGCAATGGAAGGATGGCCTAAAGGCGCTCACGATGGAATTGGAATTGTTGCTAGCATTTTGCTGGTCGTATTTGTCACCGCTACCAGTGACTATAAACAATCTCTTCAGTTCAAAGATTTGGATAAAGAGAAGAAAAAAATAGCAATTCAGGTTACCCGAAATGGATTCAGACAAAAGTTATCGATATATGATCTGCTTCCCGGTGATATTGTTCATCTAGCCATCGGAGATCAGGTACCGGCTGACGGACTTTTTGTATGTGGATTTTCCGTTCTGATCAACGAATCCAGTTTGACGGGCGAGAGTGAACCAGTTAATGTGAATTGCGAAAAACCTTTTCTTCTCTCCGGAACAAAAGTTCAAGACGGGTCATGCAAGATGCTTGTTACTTCGGTTGGAATGAGAACTCAATGGGGTAAATTAATGGCTACTCTGTGTGAAGGAGGAGATGATGAAACTCCATTGCAGGTCAAACTAAATGGAGTGGCAACAATAATCGGAAAAATCGGTCTGTTATTCGCTGTTGTCACTTTTGCTGTTTTGGTGCAAGGATTGTTTAGCCATAAATTACAAGAAGGGTCTCAGTGGGTCTGGTCTGCAGAAGATATGAGGGAAATTTTGGAATTCTTTGCCATTGCTGTCACTATAGTAGTGGTTGCAGTTCCTGAAGGGCTTCCTCTGGCTGTGACATTAAGTCTTGCTTTCGCCATGAAGAAGATGATGAATGACAAGGCACTTGTCAGACATCTTGCTGCCTGTGAAACAATGGGATCGGCTACTACTATTTGTAGCGACAAAACCGGGACGTTAACTACTAACCACATGACTGTTGTGAAAGCTTGTGTTTGCTTTAAAGTGAAGGAACTTAACAACTCTGACGATGCTTCTAGTTACGGCTTGGAAATCCCCTCTTCAAGTTTGAAACTTCTGCTTCAATCCATATTTAACAACACTGGAGGAGAAATCGTGAAGAACAAAAACGGCGAGCTTGAAATACTCGGGACTCCCACTGAGTCTGCTCTTCTGGAATTCGGCCTGTCGCTCGGTGGAGATTTTCAAAATGAACGCCAGGTTAAAATTGTGACAGTCGAGCCTTTCAATTCTCTTAAGAAAAGAATGGGATTAGTTATTGAACTTTCTGAGGGCGGTTTCCGAGCACATTCAAAAGGCGCTTCCGAGATAGTCTTGGCTGCGTGTGACAAAGTCTTGGACAAAAATGGCAAAGTTGTTCCTTTGAATGAAACATCTATCAATCTTTTGAAGAATACAATTGAACAATTTGCCAGTGAAGCTCTTCGAACTCTCTGTCTCGCTTACATGGAGATTGGAAGTGATTACAAGGCTGAGAGTCCAATGCCTGTCAATGGCTATACTTGCATAGCAATTGTGGGTATCAAAGATCCTGTTCGGCCTGGCGTCAAGGAATCTGTTGCAATTTGTAGGGCTGCTGGTATTGCTGTTAGGATGGTTACTGGAGATAATATAACCACTGCAAAGGCAATTGCTAGAGAGTGTGGAATTTTGACTGATGGTGGTATTGCTATCGAAGGTCCAGACTTCCGTGAGAAGAGCGAGGAAGAATTGCTCAAAATAATTCCAAATATTCAGAGGGAAATTGGGGGTGAGGACAGGAAACGGGTCTCTAGAGAGGAATGGGCTCTCGAATTCCCTTTAGTGATTACTGTGCATGTAATGGCCAGGTCTGCACCAATGGATAAGCATACTCTTGTAAAACATCTTCGCACCACTTTTGAAGATGTTGTTGCAGTAACTGGCGATGGCACAAACGATGCCCCTGCTCTTCACGAAGCCGATATTGGACTTGCAATGGGAATTTCTGGGACTGAGGTCGCAAAAGAGAGCGCCGATGTGATAATTCTGGACGATAATTTCTCCACGATTGTGACAGTAGCCAAATGGGGACGATCGGTGTATGTTAATATTCAGAAGTTTGTTCAGTTTCAGTTGACAGTTAATGTCGTCGCACTTCTTGTGAATTTTTCTTCTGCTTGTTTGACAGGAAACACTCCTCTCACAGCCGTCCAGCTTCTCTGGGTCAACATGATAATGGACACGCTCGGAGCACTTGCACTAGCCACTGAGCCTCCGAAAGACGACCTGATGAAGAAATCTCCAGTTGGCCGGAAAGGAAACTTCATCACCAATGTAATGTGGAGGAATATCTTAGGCCAGTCTTTATACCAGTTTGTCATGATCTGGTATCTCCAAACAAGAGGAAAAGCCCTTTTCCGCCTCACCGGTCCAGACTCCGATTTGATCCTCAACACACTCATTTTCAATTCGTTTGTCTTCTGTCAGGTTTTCAATGAGGTGAGTTCCAGAGATATGGAGGAGATAAACGTGTTCAAAGGTATACTGGAAAACTATGTCTTTGTGGGAGTGCTCGGTTGCACTGTTGTATTCCAAATCATAATTATCCAGTTTCTGGGTACATTTGCGAGCACGGCTCCATTAACTCTCCAGCAATGGATCATCTCCGTCTTCCTCGGATTCCTCGGCATGCCTATAGCAGTAGCTTTGAAGATGATCCCAGTTGGATCCAACTGA 3141 43.62 MENYLPGSFVEVKPKNSSEEALQRWRNLCWVVKNKKRRFRFTANLTKRSEAQDIRRTNKENFRVAVLVSQAALQFVDGLALSKDYTEPEEVKAAGFGIDAEELSTIVDGRDVKKLKIHDGVEGIAKKLSTSLTDGISTSEQSIKKRKDIYGVNKFTEIPPRGFWVFVWEALQDMTLMILGLCAFVSLLVGIAMEGWPKGAHDGIGIVASILLVVFVTATSDYKQSLQFKDLDKEKKKIAIQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFVCGFSVLINESSLTGESEPVNVNCEKPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLCEGGDDETPLQVKLNGVATIIGKIGLLFAVVTFAVLVQGLFSHKLQEGSQWVWSAEDMREILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACVCFKVKELNNSDDASSYGLEIPSSSLKLLLQSIFNNTGGEIVKNKNGELEILGTPTESALLEFGLSLGGDFQNERQVKIVTVEPFNSLKKRMGLVIELSEGGFRAHSKGASEIVLAACDKVLDKNGKVVPLNETSINLLKNTIEQFASEALRTLCLAYMEIGSDYKAESPMPVNGYTCIAIVGIKDPVRPGVKESVAICRAAGIAVRMVTGDNITTAKAIARECGILTDGGIAIEGPDFREKSEEELLKIIPNIQREIGGEDRKRVSREEWALEFPLVITVHVMARSAPMDKHTLVKHLRTTFEDVVAVTGDGTNDAPALHEADIGLAMGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSSACLTGNTPLTAVQLLWVNMIMDTLGALALATEPPKDDLMKKSPVGRKGNFITNVMWRNILGQSLYQFVMIWYLQTRGKALFRLTGPDSDLILNTLIFNSFVFCQVFNEVSSRDMEEINVFKGILENYVFVGVLGCTVVFQIIIIQFLGTFASTAPLTLQQWIISVFLGFLGMPIAVALKMIPVGSN 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27907713 27912460 - BLOR05006 Blo12g00987 68248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00987 1046 Gene3D - 169 1040 - -
Blo12g00987 1046 Pfam haloacid dehalogenase-like hydrolase 651 727 - -
Blo12g00987 1046 Pfam E1-E2 ATPase 239 432 - -
Blo12g00987 1046 Pfam Ca2+-ATPase N terminal autoinhibitory domain 9 50 IPR024750 GO:0005516
Blo12g00987 1046 ProSitePatterns E1-E2 ATPases phosphorylation site. 456 462 IPR018303 -
Blo12g00987 1046 Gene3D - 17 77 - -
Blo12g00987 1046 Pfam Cation transporter/ATPase, N-terminus 120 186 IPR004014 -
Blo12g00987 1046 Gene3D - 139 337 - -
Blo12g00987 1046 Gene3D - 464 659 IPR023299 GO:0000166
Blo12g00987 1046 PANTHER CALCIUM-TRANSPORTING ATPASE 3 727 - -
Blo12g00987 1046 SUPERFAMILY Calcium ATPase, transduction domain A 240 334 IPR008250 -
Blo12g00987 1046 Pfam Cation transporting ATPase, C-terminus 867 1040 IPR006068 -
Blo12g00987 1046 PRINTS Sodium/potassium-transporting ATPase signature 204 224 - -
Blo12g00987 1046 PRINTS Sodium/potassium-transporting ATPase signature 447 468 - -
Blo12g00987 1046 PRINTS Sodium/potassium-transporting ATPase signature 577 595 - -
Blo12g00987 1046 SFLD p-type atpase 436 834 IPR044492 -
Blo12g00987 1046 SUPERFAMILY HAD-like 452 887 IPR036412 -
Blo12g00987 1046 SMART Cation_ATPase_N_a_2 114 191 IPR004014 -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 652 663 - -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 674 684 - -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 806 818 - -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 285 299 - -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 454 468 - -
Blo12g00987 1046 PRINTS P-type cation-transporting ATPase superfamily signature 782 801 - -
Blo12g00987 1046 CDD P-type_ATPase_Ca_PMCA-like 145 915 - -
Blo12g00987 1046 SFLD C1.7: P-type atpase like 436 834 - -
Blo12g00987 1046 PANTHER CATION TRANSPORTING ATPASE 3 727 - -
Blo12g00987 1046 Pfam Cation transport ATPase (P-type) 515 593 - -
Blo12g00987 1046 Gene3D - 451 827 IPR023214 -
Blo12g00987 1046 SUPERFAMILY Calcium ATPase, transmembrane domain M 120 1042 IPR023298 -
Blo12g00987 1046 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 460 664 IPR023299 GO:0000166
Blo12g00987 1046 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 753 865 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00987 1046 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 478 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Blo12g00987 1046 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 108 715 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Blo12g00987 1046 Pfam haloacid dehalogenase-like hydrolase 766 823 - -
Blo12g00987 1046 PANTHER CALCIUM-TRANSPORTING ATPASE 748 1043 - -
Blo12g00987 1046 PANTHER CATION TRANSPORTING ATPASE 748 1043 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g00987 Blo-Chr12:27907713 Blo16g00829 Blo-Chr16:34712797 1.03E-141 dispersed
Blo02g00768 Blo-Chr2:25797009 Blo12g00987 Blo-Chr12:27907713 3.81E-13 transposed
Blo06g00423 Blo-Chr6:24479555 Blo12g00987 Blo-Chr12:27907713 0 transposed
Blo07g01241 Blo-Chr7:32459599 Blo12g00987 Blo-Chr12:27907713 0 transposed
Blo09g00399 Blo-Chr9:14921019 Blo12g00987 Blo-Chr12:27907713 0 transposed
Blo10g00944 Blo-Chr10:28508262 Blo12g00987 Blo-Chr12:27907713 0 transposed
Blo12g00345 Blo-Chr12:19397056 Blo12g00987 Blo-Chr12:27907713 0 transposed
Blo16g00563 Blo-Chr16:23058144 Blo12g00987 Blo-Chr12:27907713 1.38E-11 transposed
Blo12g00987 Blo-Chr12:27907713 Blo16g00350 Blo-Chr16:10270442 3.21E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00987 K01537 - zju:107433706 1678.3