Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g00999 ATGGCGCCCTCGTTCGATTGGTGGACGAAAGAGAGCCACAGAGGAACCCCCGTCGTTGTTAAGATGGAGAATCCCAACTGGTCCATGGTCGAACTCGAAGGTCCATCAGAAGATTATTTTCTCATTGCAGAATCGCCGGCCGGAGTACGAGAAAAAGGCCGAGGTAAAAACGCTAAACAGCTCACTTGGGTTCTTCTCCTCAAAGCCCACAAAGCCGCCGGCTGTTTAACCTCCATTGGCTCTGCATTTGTCGGACTCACCGCCGCAGTTAAACGGCGTGTCGCTTCGGGTAGAACTGACGCCGATGCCGACAACGACAACGACAACGATATTGATTGTAGCAGGGAGAAAGAGAACCCTACATTGAAAACCAGGTTTTATTCTTGTATCAAAGTTTTTCTTCTTCTCTCGGTGCTTCTTCTGGGTTTTGAGGTTGCTGCCTACTTCAAAGGTTGGCATTTTAGCACTCCCCATCTTCAATTGAGCTATTTGTGGGCAACTCCTTTTGGGGTAAAAGGAACTTTCGACTGGATTTATTCTCAATGGGTCTTAATTCGGGTGGATTATCTTGCTCCTCCTCTCCAATTCTTAGCCAATGCTTGCATTATCCTTTTCCTCATTCAGAGTTTAGACAGGCTAATTTTGTGTATGGGTTGTTTCTGGATTCGATTCAAGAAGATAAAACCAGTTCCGAAAGAAGCCCCCATCGACGACATTGAATCCGGCGAGAAGGGCTATTTTCCAATGGTTCTTGTTCAGATCCCCATGTGCAACGAAAAGGAGGTTTATCAGCAATCAATTGCTGCAGTTTGTAATTTAGACTGGCCAAAATCAAAGCTACTCATTCAGGTTCTCGACGATTCAGATGACCCAATGACCCAAGTGCTGATCAAAGAAGAGGTCCAAAAATGGCAGCAAGAAGGGGCCAGCATTGTGTATAGGCATAGGGTAATTAGAGATGGGTACAAGGCTGGTAATCTCAAGTCTGCAATGAACTGTAGCTACGTTAAAGATTATGAATTCGTTGCCATTTTCGATGCTGATTTTCAGCCAACCCCTGATTTCCTTATAAGAACAGTCCCTCATTTCCAGGATAACGAAGAACTGGGCCTGGTTCAAGCAAGGTGGTCTTTTGTGAACAAGGATGAGAATTTGCTTACAAGGCTGCAGAATATCAATTTAGCATTCCACTTTGAGGTGGAGCAGCAAGTTAATGGCGTTTTCCTTAATTTCTTCGGGTTCAATGGGACAGCGGGAGTATGGAGGATTAAGGCCTTGGAAGATTCTGGTGGGTGGTTGGAGAGAACCACGGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTTCATGGATGGAAATTCATCTTCCTCAACGATGTAGAGTGCCAGTGTGAATTGCCGGAATCTTATGAAGCTTATCGGAAACAACAGCATCGATGGCATTCCGGGCCAATGCAATTGTTTCGCCTTTGTTTGCCTGCTATAATTCGATCCAAGATAAGCTTGTGGAAGAAATTCAATATGATCTTTCTATTCTTTCTTCTGAGGAAGCTAATTCTACCTTTCTATTCGTTCACTCTCTTCTGCATAATTCTTCCAATGACCATGTTTGTTCCTGAGGCTGAGCTACCAGCTTGGGTTGTCTGCTACATTCCTGCGACAATGTCATTTCTTAACATTCTCCCTGCGCCAAAGTCCTTCCCCTTTATCGTCCCTTATCTTCTCTTTGAGAACACCATGTCTGTAACTAAGTTCAATGCGATGATCTCTGGTTTGTTTCAGCTGGGCAGTGCTTATGAGTGGGTAGTTACTAAGAAATCCGGTAGATCGTCCGAGGGTGATCTCGTTGCCTTGATTGAAAAAGAATCGACTCATCAAAGAGGGTCATCAGCTCCTAATCTGGATGAATTGAAGGAAGAGATTCAAAAGCAGGAGCAGAAAGCTTTGCTGAAGAAGAAGATGAAACACAATAGAATATACAGGAAGGAGCTGGCTTTAGCTTTTCTACTTCTAACAGCGTCCGCCCGAAGCCTCCTCTCGGCTCAGGGTATCCATTTTTACTTCTTGTTGTTTCAGGGGATCTCTTTTCTTCTGGTGGGTTTGGATCTGATCGGAGAGCAGGTGGAGTGA 2130 44.88 MAPSFDWWTKESHRGTPVVVKMENPNWSMVELEGPSEDYFLIAESPAGVREKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSAFVGLTAAVKRRVASGRTDADADNDNDNDIDCSREKENPTLKTRFYSCIKVFLLLSVLLLGFEVAAYFKGWHFSTPHLQLSYLWATPFGVKGTFDWIYSQWVLIRVDYLAPPLQFLANACIILFLIQSLDRLILCMGCFWIRFKKIKPVPKEAPIDDIESGEKGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPMTQVLIKEEVQKWQQEGASIVYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLIRTVPHFQDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPAIIRSKISLWKKFNMIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVALIEKESTHQRGSSAPNLDELKEEIQKQEQKALLKKKMKHNRIYRKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE 709
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 27995952 27998445 - BLOR05018 Blo12g00999 68260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g00999 709 SUPERFAMILY Nucleotide-diphospho-sugar transferases 250 527 IPR029044 -
Blo12g00999 709 Coils Coil 634 654 - -
Blo12g00999 709 Pfam Glycosyl transferase family group 2 342 536 IPR001173 -
Blo12g00999 709 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 240 465 IPR029044 -
Blo12g00999 709 PANTHER - 6 708 - -
Blo12g00999 709 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 6 708 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo01g01718 Blo-Chr1:56912992 Blo12g00999 Blo-Chr12:27995952 0 dispersed
Blo03g01064 Blo-Chr3:37017690 Blo12g00999 Blo-Chr12:27995952 1.75E-134 dispersed
Blo12g00502 Blo-Chr12:22870564 Blo12g00999 Blo-Chr12:27995952 2.44E-139 dispersed
Blo12g00794 Blo-Chr12:26331871 Blo12g00999 Blo-Chr12:27995952 0 dispersed
Blo05g00411 Blo-Chr5:5227737 Blo12g00999 Blo-Chr12:27995952 0 transposed
Blo01g01484 Blo-Chr1:54286886 Blo12g00999 Blo-Chr12:27995952 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g00999 - - zju:107420618 1226.08