Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g01004 | ATGGGTTCCGATGATGTCTCCACCGGCCTTGTTCTTGGTCTGAGCCACCACCCCAAAGCAGAGAAATCTCTCAAATCATGTCATCTGAAAGGGAAGAATCCATCTTCAAATTTTGGAAGTGCCTTTCTCAGTCTAGGTCTCTCAGACGAGACCAACCCAATGGCTACCAACTCCCGCGTCAATACGCAACTTCCCTACGAACCAAATGATGCACTCCGGCGGCAGGCCTCTGCTTCAAACTCATCCAGTTTCAAGCGCGATAGAGACTTCTGCGACGGCGATGAGATGGAAGCAGAGGCTGAGGTGGAGTTAGAGCGCATCTCCTCTAGGCTCAGCGAGGAAGAAGAAGACGGCGTTGGCAGCCCGAGGAAAAAACTGAGACTCACAAAAGATCAATCTGCCATTTTAGAGTGCAGCTTCAAAGAGCATGCCACTCTAAACCCCAAACAAAAACAAGAGTTGGCAAGAAGGTTGAGTTTAAGCACAAGACAAGTGGAAGTCTGGTTCCAAAACAGGAGAGCCAGGACTAAGCTGAAGCAAACAGAAGAGAGCTGCGAGCTGTTGAAGAAATGCTGCGAATCACTAACAGAAGAGAACAAGAGGCTAAAGAAAGAGCTTCAAGACATCAAATCAGTAAAATCAGCAGCTCATCCGCCATTTTATATGCAGCTCCAAACAGCAACTCTCTCCATGTGTCCCTCTTGCGAGAGAATTTGCAGTATCGGCGATGGCTCTTCCCCCACAAGCACTCTCTCAGTTGGTCCAAAATCTAACCTCTGTAATTCCCCTTGA | 792 | 48.23 | MGSDDVSTGLVLGLSHHPKAEKSLKSCHLKGKNPSSNFGSAFLSLGLSDETNPMATNSRVNTQLPYEPNDALRRQASASNSSSFKRDRDFCDGDEMEAEAEVELERISSRLSEEEEDGVGSPRKKLRLTKDQSAILECSFKEHATLNPKQKQELARRLSLSTRQVEVWFQNRRARTKLKQTEESCELLKKCCESLTEENKRLKKELQDIKSVKSAAHPPFYMQLQTATLSMCPSCERICSIGDGSSPTSTLSVGPKSNLCNSP | 263 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 28027205 | 28028282 | + | BLOR05023 | Blo12g01004 | 68265 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g01004 | 263 | ProSiteProfiles | 'Homeobox' domain profile. | 119 | 179 | IPR001356 | GO:0003677 | |
Blo12g01004 | 263 | ProSitePatterns | 'Homeobox' domain signature. | 154 | 177 | IPR017970 | GO:0000981|GO:0006355 | |
Blo12g01004 | 263 | SMART | halz | 179 | 224 | IPR003106 | GO:0006355|GO:0043565 | |
Blo12g01004 | 263 | PANTHER | HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN | 62 | 249 | - | - | |
Blo12g01004 | 263 | CDD | homeodomain | 122 | 180 | IPR001356 | GO:0003677 | |
Blo12g01004 | 263 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Blo12g01004 | 263 | Pfam | Homeodomain | 123 | 177 | IPR001356 | GO:0003677 | |
Blo12g01004 | 263 | MobiDBLite | consensus disorder prediction | 51 | 89 | - | - | |
Blo12g01004 | 263 | Coils | Coil | 178 | 212 | - | - | |
Blo12g01004 | 263 | PANTHER | - | 62 | 249 | - | - | |
Blo12g01004 | 263 | MobiDBLite | consensus disorder prediction | 51 | 65 | - | - | |
Blo12g01004 | 263 | MobiDBLite | consensus disorder prediction | 106 | 125 | - | - | |
Blo12g01004 | 263 | Gene3D | - | 117 | 186 | - | - | |
Blo12g01004 | 263 | SUPERFAMILY | Homeodomain-like | 117 | 180 | IPR009057 | - | |
Blo12g01004 | 263 | SMART | HOX_1 | 121 | 183 | IPR001356 | GO:0003677 | |
Blo12g01004 | 263 | MobiDBLite | consensus disorder prediction | 243 | 263 | - | - | |
Blo12g01004 | 263 | Coils | Coil | 97 | 117 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g01480 | Blo12g01004 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo07g01279 | Blo-Chr7:32988904 | Blo12g01004 | Blo-Chr12:28027205 | 8.51E-55 | dispersed | |
Blo12g01004 | Blo-Chr12:28027205 | Blo14g00693 | Blo-Chr14:15928520 | 5.19E-35 | dispersed | |
Blo01g01480 | Blo-Chr1:54162228 | Blo12g01004 | Blo-Chr12:28027205 | 1.57E-131 | wgd | |
Blo12g01004 | Blo-Chr12:28027205 | Blo04g01103 | Blo-Chr4:17324118 | 9.33E-67 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13085 | PF00046 | Homeodomain | 5.80E-17 | CL0123 | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g01004 | K09338 | - | qsu:111996753 | 236.498 |