Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Blo12g01005 | ATGGAGGAATTCAACCAGCTAAGCGAGAATTCAAATCACAGGGGAAGTTTCTTTTACACCTCGGCTCTTCTTGCAGGCAATTCTTCTCCTTCTAATCATGGAAGATCAACAACTGGAGGCTCAAACACGAGCTCTCGGCAAACCCAAATAGCCATTAATAGCTTTCATGGCGACAGCTTTCAGCCTGATCCTATCGTTAAAACGGAAGCCTTCACTTCGATGCACTGTGTTCAGAAACATCATCGTCCACTGATAAGAAGCCATCAAAGTTCGATTCAAAGGACTGATGAAGGCTCTAATGATGTTGAGGAGATTAAGGCTAAGATCATTGCCCATCCACAGTATTCTAACCTCTTGGAAGCTTATATGGATTGTCAAAAGGTCGGAGCTCCACCAGAAGTGGCGGCTAGTCTCGCTGAGGCTCGCCGGGAGTTTGAAGCGCGGCATCGAACTGTGTCAAGAGACAATTCGAACGATCCCGAACTTGATAAGTTCATGGAAGCATATTACGATATGCTGGTGAAGTATCGCGACGAGATTGCGAGGCCCATTCAAGAAGCAACGGATTTTATGCATCGGATTGAATCTCAACTCAATGCGCTTTGCAGTGGCCCTATCCGGATCTTCACCTTCGATGAAAAATGCGAAGGCAATGGCTCATCGGAGGACGATCAGGACAACAGCAGAGGGGAAACAGAACTGCCGGAGATGGATCCTAGGGCGGAAGATCGAGAACTGAAGAATCAGCTTCTGAGGAAGTACAGTGGCTATTTAGGCAGTCTGAAGCAAGAACTTTCGAAGAAAAAAAAGAAAGGAAAGCTACCCAAAGATGCAAGGCAAAAGCTTCTGAACTGGTGGGAGATGCATTACAAATGGCCATACCCGTCGGAGACGGAGAAGGTGGCGCTGGCCGAGTCGACCGGTTTGGACCAGAAACAAATCAACAATTGGTTCATAAATCAAAGGAAGAGACACTGGAAACCTTCAGACGACGGGCAATTCTTGGTAATGGATGGACTTTATCCTCCCAATGGAGGGCTCTGTATGGACTCCCACTACATGCCTAATGCCCATTATCGCCTCGGACCCTGA | 1092 | 47.34 | MEEFNQLSENSNHRGSFFYTSALLAGNSSPSNHGRSTTGGSNTSSRQTQIAINSFHGDSFQPDPIVKTEAFTSMHCVQKHHRPLIRSHQSSIQRTDEGSNDVEEIKAKIIAHPQYSNLLEAYMDCQKVGAPPEVAASLAEARREFEARHRTVSRDNSNDPELDKFMEAYYDMLVKYRDEIARPIQEATDFMHRIESQLNALCSGPIRIFTFDEKCEGNGSSEDDQDNSRGETELPEMDPRAEDRELKNQLLRKYSGYLGSLKQELSKKKKKGKLPKDARQKLLNWWEMHYKWPYPSETEKVALAESTGLDQKQINNWFINQRKRHWKPSDDGQFLVMDGLYPPNGGLCMDSHYMPNAHYRLGP | 363 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 28031041 | 28033267 | - | BLOR05024 | Blo12g01005 | 68266 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Blo12g01005 | 363 | SMART | KNOX2_2 | 152 | 203 | IPR005541 | GO:0003677|GO:0005634 | |
Blo12g01005 | 363 | SMART | HOX_1 | 267 | 332 | IPR001356 | GO:0003677 | |
Blo12g01005 | 363 | MobiDBLite | consensus disorder prediction | 216 | 241 | - | - | |
Blo12g01005 | 363 | ProSiteProfiles | 'Homeobox' domain profile. | 265 | 328 | IPR001356 | GO:0003677 | |
Blo12g01005 | 363 | SUPERFAMILY | Homeodomain-like | 266 | 339 | IPR009057 | - | |
Blo12g01005 | 363 | ProSitePatterns | 'Homeobox' domain signature. | 303 | 326 | IPR017970 | GO:0000981|GO:0006355 | |
Blo12g01005 | 363 | Gene3D | - | 270 | 332 | - | - | |
Blo12g01005 | 363 | SMART | KNOX1_2 | 103 | 147 | IPR005540 | GO:0003677|GO:0005634 | |
Blo12g01005 | 363 | Pfam | Homeobox KN domain | 285 | 324 | IPR008422 | GO:0003677|GO:0006355 | |
Blo12g01005 | 363 | ProSiteProfiles | ELK domain profile. | 245 | 265 | IPR005539 | GO:0003677 | |
Blo12g01005 | 363 | CDD | homeodomain | 277 | 329 | IPR001356 | GO:0003677 | |
Blo12g01005 | 363 | Pfam | KNOX2 domain | 157 | 202 | IPR005541 | GO:0003677|GO:0005634 | |
Blo12g01005 | 363 | Pfam | ELK domain | 245 | 266 | IPR005539 | GO:0003677 | |
Blo12g01005 | 363 | MobiDBLite | consensus disorder prediction | 214 | 241 | - | - | |
Blo12g01005 | 363 | Pfam | KNOX1 domain | 105 | 146 | IPR005540 | GO:0003677|GO:0005634 | |
Blo12g01005 | 363 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 1 | 353 | - | - | |
Blo12g01005 | 363 | SMART | ELK_2 | 245 | 266 | IPR005539 | GO:0003677 | |
Blo12g01005 | 363 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 | 1 | 353 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Blo01g01479 | Blo12g01005 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Blo12g01005 | Blo-Chr12:28031041 | Blo13g00994 | Blo-Chr13:32344218 | 1.89E-88 | dispersed | |
Blo01g01479 | Blo-Chr1:54145214 | Blo12g01005 | Blo-Chr12:28031041 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
13086 | PF03791 | KNOX2 | 1.80E-22 | No_clan | Blo | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Blo12g01005 | - | - | vvi:100255834 | 504.982 |