Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01008 ATGGCTTGCTCGATGGAGTCCAAACGAGTCAGCATTGAAAGTTTTCGACGGAGGTTTTGGGTTTCAGAGAATGCCCTCGTTGCTTATCCTCGAGTGTTTCAGCGCTACCCGAATCCTCCGCCGCTAGCTCCGGCCTCCGTTGCCTCCATCTCTACGCTACCGTGCCGTCGGGCTGCTAAATCGGGAATCGATTCAACTAAATCGTTATATTATAACATTGTTTTTCATAGGAGTGATCTTGTTATTATCATTCGTAAGCTACCAGCAAAAAATTACAGAGAAAAATGCAAGCGGTCACATGTGTCTGATAAACGAGAGGGTCTGTTCGAAGGATTACTTCTTTCTGGCTCCAATAAGAGGAGAAACCCAGCAGTTCGAACAGACTGCTCTGTGGGACTGACATATGATGGAATGGCTACAGAAACACATTCGTACACAGAGGAAGAAAAGGTTGGAGTGCTGCTGCTTAATTTAGGAGGACCAGAAACGCTTAATGATGTCCAACCATTTCTTTTCAACCTATTTGCAGACCCAGATATTATTAGACTCCCTAGGTTGTTTAGGTTTCTCCAACGCCCATTGGCAAAACTAATTTCAGAGCTTCGAGCTCCTAAGAGCAAAGAAGGGTATGCTGCTATAGGAGGTGGCTCACCATTACGTAAAATAACAGATGAGCAGGCACATGCACTTGAAATGGCTTTGAAAGCAAAGAACATGCCTGCCAAGGTCTATGTGGGGATGCGCTATTGGTATCCATTCACCGAAGAAGCAGTACACCAAATTAAGAGGGATAGAATAACAAGGCTGGTTGTCCTTCCTTTATATCCCCAGTTTTCTATTTCCACAACTGGGTCAAGTATTCGTGTTCTTGAAAAAATGTTCAGGGAAGATACATATCTTTCAAGGTTGCCTGTTTCTATTATAAAGTCCTGGTATCAACGGGAGGGCTATTTTAAGTCAATGGCTGACTTGATTGAGAAAGAGCTAGAGAGTTTTCCTAATTCAAAGGAGGTAGTCATGATTTTCTTCAGTGCTCATGGAGTTCCTGTCAGTTATGTTGAGGAGGCGGGAGATCCATACAAAGATCAAATGGAAGAATGCATCCATTTAATCATGAAAGAGTTAAAAGCTAGAGGAATACACAATGAACATACTTTAGCTTACCAGAGCCGAGTTGGTCCTGTGCAATGGCTGAAACCCTACACTGACGAATCACTCGTTGAGCTTGGCCAGAAAGGTGTGAAGAGTCTCCTAGCAGTCCCTGTCAGCTTTGTGAGTGAACACATTGAGACACTGGAAGAAATTGACATGGAGTACAAACACTTGGCCCTGGAATCTGGAATTATAAATTGGGGCCGTGTTCCTGCACTCAATTGCACCACAACCTTTATAACAGATCTAGCCGATGCTGTAGTAGAAGCCCTTCCATCAGCGACAGCCATTTCAACCCCGAGAACCTCCTCTGAGATGGTTGATTATGACCCCCTTACATTTGCTATCAAAATTTTCTTTGGTTCCTTCTTAGCCTTTATTTTGCTGTTTTCACCAACAATGTTTACAAAATTGAGAAACCTCATCTGA 1581 43.39 MACSMESKRVSIESFRRRFWVSENALVAYPRVFQRYPNPPPLAPASVASISTLPCRRAAKSGIDSTKSLYYNIVFHRSDLVIIIRKLPAKNYREKCKRSHVSDKREGLFEGLLLSGSNKRRNPAVRTDCSVGLTYDGMATETHSYTEEEKVGVLLLNLGGPETLNDVQPFLFNLFADPDIIRLPRLFRFLQRPLAKLISELRAPKSKEGYAAIGGGSPLRKITDEQAHALEMALKAKNMPAKVYVGMRYWYPFTEEAVHQIKRDRITRLVVLPLYPQFSISTTGSSIRVLEKMFREDTYLSRLPVSIIKSWYQREGYFKSMADLIEKELESFPNSKEVVMIFFSAHGVPVSYVEEAGDPYKDQMEECIHLIMKELKARGIHNEHTLAYQSRVGPVQWLKPYTDESLVELGQKGVKSLLAVPVSFVSEHIETLEEIDMEYKHLALESGIINWGRVPALNCTTTFITDLADAVVEALPSATAISTPRTSSEMVDYDPLTFAIKIFFGSFLAFILLFSPTMFTKLRNLI 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28060629 28065117 + BLOR05027 Blo12g01008 68269

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01008 526 Gene3D - 312 456 - -
Blo12g01008 526 Gene3D - 150 476 - -
Blo12g01008 526 SUPERFAMILY Chelatase 149 481 - -
Blo12g01008 526 CDD Ferrochelatase_C 321 458 IPR033644 -
Blo12g01008 526 Hamap Coproporphyrin III ferrochelatase [cpfC]. 149 475 IPR001015 GO:0004325|GO:0006783
Blo12g01008 526 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 94 525 - -
Blo12g01008 526 Pfam Ferrochelatase 150 474 IPR001015 GO:0004325|GO:0006783
Blo12g01008 526 ProSitePatterns Ferrochelatase signature. 341 360 IPR019772 GO:0004325|GO:0006783
Blo12g01008 526 PANTHER FERROCHELATASE 94 525 IPR001015 GO:0004325|GO:0006783
Blo12g01008 526 TIGRFAM hemH: ferrochelatase 147 474 IPR001015 GO:0004325|GO:0006783
Blo12g01008 526 CDD Ferrochelatase_N 151 313 IPR033659 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01008 K01772 hemH, FECH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] - zju:107420114 642.499
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo02g00042 Blo-Chr2:231445 Blo12g01008 Blo-Chr12:28060629 7.04E-62 dispersed
Blo12g01008 Blo-Chr12:28060629 Blo15g00641 Blo-Chr15:17166112 4.53E-55 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g60 . Blo12g01008 . . . . . . Cmo05g00110 Cmo12g00571 . Cma05g00103 . Car12g00578 Sed08g1759 Cpe07g00551 . Bhi04g00495 Tan02g1649 Cmetu03g0633 . Hepe08g1382 . Lcy13g2176 . . . . . . . Cone4ag1651 Cone7ag1299 . . . . . . . . . . . . . . . . . . Cma12g00630 . Car05g00089 Cpe11g00083 . . . . . . . . . . . . . . . Lsi08g01574 Csa02g01847 Chy03g01637 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010052 0 1 1 0 0 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 1 2 1 33
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g01008 Blo_Chr12 FPKM 117.007088 125.546089 362.634216 368.213043 54.497726 53.298374 53.916843 174.054337 170.516357 173.68045