Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01013 ATGAAACATCTACTGAGAAAGCTTCACATAGGTGGGAGTATGAACGAACATCAAAGATTGGGGGAGACTCCTTCTGTGATCAGGCCTGAACCGACTACTAATTCATCTGTTTCATCCTCTTGGGGGTCAACGTCGACTCCGGATTCACCTTCTTTGGGTACAATGGAGAGATTTGGGGCTGTTGCTTCGGTCGTCGATCAGAGTTCTGTAAACTTCAATTTATTGGAGGAGGAGTTTCAGGTGGAATTGGCGATGGCAATTAGCGCCTCAGATCCTGCTGTGAGAGAGGACCCTGAGTCGGCTCAGATCGATGCTGCAAAGCGGATGAGTCTAGGTTGTTTTCCTTCTGTTTCAGACACCCATGCCTTAGTCGAACTTCTATCGCTTCAGTATTGGAGCTACAATGTTATACATTATGATGAAAAAGTGTTGGATGGCTTTTATGACATACGTTGCACGACGTCAAACTCAGGTACACAAGGGAAGATGCCATTGTTGGTGGATCTTCAAGCAACATCTGTTTCTAGTGATGTTAATTATGATGCGATTTTGGTAAATGGCTTCGTTGATCTTGAACTTCAACAGCTGGAGAGACAAGTACATACTATATCTATAGATTGTAGAGACTCAAATGACTGGCTCATTTTTAGTGGCCTAATTCAAAAAATCGCTAATATTGTTGTCAATAGAATGGGTGGTCCTGTTGATGATACTGAAGAAATATTCAGAAGATGGAACACCAGGAGCTATGAGTTGCGTAGTTCTCTGAAAACTAATGTTCTACCCCTAGGACTCCTTGATATTGGACTTTCACGACATAGAGCCTTGCTTTTTAAGGTACTAGCTGATTGGATCAATCTTCCATGCATGCTGGTTAAAGGAAGCTACTACACAGGCACGGATGATGGGGCTATGAACTTGATTAAAGTTGATGGAGGAAGTGAGTACATTATTGATTTGATGGGTGCTCCTGGTACTCTGATTCCATCTGAGCCATCTGGCTGTCAACTATTAAATTCTGGATTTGGTGACGTGAGAATCAAAGAAATGCCAATAAGTGAACTGACCGAGGAAATTTTATCAAATTGTGTTAAAGCTGCGGAAATTAGCAACTTAATGTCCATGGAAGCATCTTTCTCCGAGGGTAGTAAAACAATGAAGGATGACAGAAATTCTGCCGAAACTCATAGTGGGATTGATGATGGGTTTAGATATCTTTCCAAGTTGCAACATAACTCAGACAAAACATTGGGTGCTTATGGAAAAAGATCCTTTGCCAATGAGAAGAAAGTTAAAAATGTTTCCAAGTATGTAATATCTGCAGCAAAGAACCCTGAATTTGCTCAGAAACTACACGCAGTTTTGTTAGAGAGTGGCACATCGCCTCCTCCAGATTTTCTTACAGATATAACTTCACTGGGCCCTGTTCAGACCAAAATGCAACAGCAAATTCATTCAGTCAATGGAAAAGATGTTGATGTATTTCAGTGTCAGTCCCGTGAGTTATCAGCAACTGATGGTCTTACACTCGCTTCTAATGTAATGGAGTCGTTTGACAATGTTATCTATGAAAGGAAGCAGAAACAATCTTCTGAGAGATTAGTCGAACAACTAAGAGAAACAGATTCATGTTTCGGGAATCACGAAGTTTCTCTTCAATGTTGTACCACAAGTGAAAAATTCACGCCTTTGGGTACTGGAATCTATAAACAGATCCAAGTAGATACTCATCAAGAATATATTGCCGAGCCTTCCATGACCGCTAACACCAGCCCTTGTCAAAGACAGCATGAAATGGCTTGGAGTGTCAACAACAAAATCACAGATAAGAATGAAAGCTTTCCTTATAAAAATGAGGCAAAAGAATCAGAAAATATGAAAACGATGGGTATAAGTGGCCTGCATATTGCGTGTGTTGGTCATTCTGAGAGGGTTGGGGCAGTGTTGAGTGACGTTGCGGAATGGGAAATTCCATGGGAGAATATTAACATTGGTGAACGTATTGGCATTGGCTCATATGGTGAGGTCTATCGAGCGGATTGGAATAGCACTGAAGTTGCTGTAAAGAAGTTTTTGAACCAAGATCTTTCTGGCGATGCATCGACTGAGTTAAAGAGTGAAGTTGAGATCATGTTAAGACTGAGGCATCCCAATGTTGTCCTTTTCATGGGAGCAGTTACCCGTGGTCCACATTTCTCTATCCTCACAGAGTTCCTTCCGAGGGGAAGTTTATTTGGGTTGCTGCATCGTTCAAACTACCAACTCAAGGAGAAGAGAAGGTTGAGAATGGCTCTTGACGTGGCAAAGGGAATGAATTACTTGCACACAAGCCATCCAACAGTTGTTCATCGAGATTTAAAGTCTCCGAATCTCCTTGTTGATAAAAACTGGGTTGTTAAGGTTTGTGACTTTGGTTTGTCACGCATAAAGCTCCATACTTTTCTGTCTTCCAACTCAACAGCTGGAACGTTTATAATTGAAAGTTGTACGATTCTATTGTTCTTGTTTTCATGCTGTAATAGTTTTACTGGAATGAATAGCTTTCCAGAATGGATGGCTCCAGAAGTTTTGAGGAATGAGCCAGCCAATGAGAAGTGTGATGTGTACAGTTTTGGTGTAATATTGTGGGAGTTGGCTACTTGCTCTATACCATGGAAAGGTTTGAACCCAATGCAGGTTGTGGGAGCTGTTGGATTCCAAGATAGGCAACTGGAGATTCCAGATGATGTCGATCCAGTTGTCGCTCAAATCATATTAGATTGTTTGCGATCGTAA 2775 41.41 MKHLLRKLHIGGSMNEHQRLGETPSVIRPEPTTNSSVSSSWGSTSTPDSPSLGTMERFGAVASVVDQSSVNFNLLEEEFQVELAMAISASDPAVREDPESAQIDAAKRMSLGCFPSVSDTHALVELLSLQYWSYNVIHYDEKVLDGFYDIRCTTSNSGTQGKMPLLVDLQATSVSSDVNYDAILVNGFVDLELQQLERQVHTISIDCRDSNDWLIFSGLIQKIANIVVNRMGGPVDDTEEIFRRWNTRSYELRSSLKTNVLPLGLLDIGLSRHRALLFKVLADWINLPCMLVKGSYYTGTDDGAMNLIKVDGGSEYIIDLMGAPGTLIPSEPSGCQLLNSGFGDVRIKEMPISELTEEILSNCVKAAEISNLMSMEASFSEGSKTMKDDRNSAETHSGIDDGFRYLSKLQHNSDKTLGAYGKRSFANEKKVKNVSKYVISAAKNPEFAQKLHAVLLESGTSPPPDFLTDITSLGPVQTKMQQQIHSVNGKDVDVFQCQSRELSATDGLTLASNVMESFDNVIYERKQKQSSERLVEQLRETDSCFGNHEVSLQCCTTSEKFTPLGTGIYKQIQVDTHQEYIAEPSMTANTSPCQRQHEMAWSVNNKITDKNESFPYKNEAKESENMKTMGISGLHIACVGHSERVGAVLSDVAEWEIPWENINIGERIGIGSYGEVYRADWNSTEVAVKKFLNQDLSGDASTELKSEVEIMLRLRHPNVVLFMGAVTRGPHFSILTEFLPRGSLFGLLHRSNYQLKEKRRLRMALDVAKGMNYLHTSHPTVVHRDLKSPNLLVDKNWVVKVCDFGLSRIKLHTFLSSNSTAGTFIIESCTILLFLFSCCNSFTGMNSFPEWMAPEVLRNEPANEKCDVYSFGVILWELATCSIPWKGLNPMQVVGAVGFQDRQLEIPDDVDPVVAQIILDCLRS 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28074927 28081473 - BLOR05032 Blo12g01013 68274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01013 924 CDD STKc_MAP3K-like 668 921 - -
Blo12g01013 924 ProSiteProfiles Protein kinase domain profile. 662 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01013 924 Gene3D Phosphorylase Kinase; domain 1 655 739 - -
Blo12g01013 924 PANTHER SERINE-THREONINE PROTEIN KINASE 380 823 - -
Blo12g01013 924 SMART serkin_6 662 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01013 924 ProSitePatterns Protein kinases ATP-binding region signature. 668 690 IPR017441 GO:0005524
Blo12g01013 924 PANTHER SERINE-THREONINE PROTEIN KINASE 848 922 - -
Blo12g01013 924 PANTHER SERINE-THREONINE PROTEIN KINASE 64 329 - -
Blo12g01013 924 Pfam Protein kinase domain 664 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Blo12g01013 924 Gene3D Transferase(Phosphotransferase) domain 1 740 924 - -
Blo12g01013 924 Pfam Ethylene-responsive protein kinase Le-CTR1 125 328 - -
Blo12g01013 924 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 848 922 - -
Blo12g01013 924 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 380 823 - -
Blo12g01013 924 MobiDBLite consensus disorder prediction 27 52 - -
Blo12g01013 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Blo12g01013 924 SUPERFAMILY Protein kinase-like (PK-like) 646 923 IPR011009 -
Blo12g01013 924 MobiDBLite consensus disorder prediction 8 53 - -
Blo12g01013 924 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 64 329 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01468 Blo12g01013 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo04g00851 Blo-Chr4:9318050 Blo12g01013 Blo-Chr12:28074927 2.21E-77 dispersed
Blo12g01013 Blo-Chr12:28074927 Blo16g00112 Blo-Chr16:2636185 1.52E-69 dispersed
Blo12g01013 Blo-Chr12:28074927 Blo01g01468 Blo-Chr1:53894919 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
84601 PF00069 Pkinase 3.20E-43 CL0016 Blo PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01013 K04424 - csv:101214554 966.837