Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01017 ATGGGTGCTTCTGGAAAATGGGTGAAGTCTCTAATAGGTTTCAAGAAGCCCGACAAGGAAGACCATGAAAAACCAAGTGGTAAGAGCAAGAAATGGAGGCTATGGAGAAACCCATCAGGCGATTTAGGCTCTGCTTGGAAAGGTTTCAAAGGAGGCCGGAGAGCAGCATCTGAGGGATCAGATTCTCCCCGAGCGGCTGATGCTTTTACGGCAGCCATGGCTACTGTCCTTCGAGCTCCGCCAAAAGATTTTAGGGTTGTGAAGCAAGAATGGGCGGCTATTCGGATCCAAACTGCCTTCCGTGGCTTCCTGGCAAGGCGTGCCCTGAGGGCGCTGAGAGGAGTGGTGAGGCTTCAAGCTCTTGTTCGGGGCCGTCTGGTGAGAAAGCAAGCAGCTGTGACTCTGCGATGCATGCAAGCTCTGGTTCGAGTCCAAGCTCGAGTGAGGGCCCGTCGAGTGAGAATGTCAATGGAGGGTCAGGCCGTCCAGCAAATACTAACTGAACATCGAACAAAGGCTGATCTCTTGAAGCAGGCTGAGGCAGGGTGGTGTGACAGTAGGGGAACGTTGGATGATGTTAAGACAAAGCTACAAATGAAGAAAGAAGGAGCTTTTAAGAGAGAGAGAGCAATTGCATACTCTCTTGCTCAAAAGCAATGGAAATCAACTCCCTCTGCAGTGTCTAGAACAAATGCTTCATCTATGAAGAATCAAGAGTTTGATAAGAACAGCTGGGGATGGAGCTGGTTAGAGAGATGGATGGCTGCTAAGCCTTGGGAAACTAGGCTGATGGAACAGTCCCAAAATGATCCACCGGAGTCTACGCCACCTCCCAAGAGCCTTATAGACTCCTCTTTGGGTAAACACTCAAAAGCGCCTGAACATGGCTATGTAAAAGTCAGAAAAAACAACATTTCTACAAGAATTTCTGCTAGACCTCCTCAATTTAATCAAGTTACTAGGTCCTCGTCTAGCCCGAGTTCTGAAGTACGGTACGAGGAGAGCTCGGCATCATCCTCGTTCTGCACCTCCACAACTCCCGTGTCCGGCAACACCTTGAAGGCTGGCGAAAGAACAGAAAACAGCTCGAGAAATCCGCCGAGTTACATGAATTTGACTGAGTCAACTAAAGCGAAACAAAAAATTAGTGGTCAGCTGTCTCATAGGATTCAAATGCAATCCATGGATGAGCTTAAGTTCATCAACAGCTCAGCAGATTTTTCAAATGGGGACTCCAAAAGTAGTGCTGGCTCTGACCCTTCTGTCAATTTATTCAAGTCGCTGGTCTTACCAATTGGATCCGGTAAGAATGCATGTAAGGTAAGATGTGTGTAG 1335 48.09 MGASGKWVKSLIGFKKPDKEDHEKPSGKSKKWRLWRNPSGDLGSAWKGFKGGRRAASEGSDSPRAADAFTAAMATVLRAPPKDFRVVKQEWAAIRIQTAFRGFLARRALRALRGVVRLQALVRGRLVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQQILTEHRTKADLLKQAEAGWCDSRGTLDDVKTKLQMKKEGAFKRERAIAYSLAQKQWKSTPSAVSRTNASSMKNQEFDKNSWGWSWLERWMAAKPWETRLMEQSQNDPPESTPPPKSLIDSSLGKHSKAPEHGYVKVRKNNISTRISARPPQFNQVTRSSSSPSSEVRYEESSASSSFCTSTTPVSGNTLKAGERTENSSRNPPSYMNLTESTKAKQKISGQLSHRIQMQSMDELKFINSSADFSNGDSKSSAGSDPSVNLFKSLVLPIGSGKNACKVRCV 444
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28111644 28113705 - BLOR05036 Blo12g01017 68278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01017 444 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 438 - -
Blo12g01017 444 MobiDBLite consensus disorder prediction 265 371 - -
Blo12g01017 444 MobiDBLite consensus disorder prediction 1 63 - -
Blo12g01017 444 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Blo12g01017 444 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Blo12g01017 444 SMART iq_5 111 132 IPR000048 GO:0005515
Blo12g01017 444 SMART iq_5 88 110 IPR000048 GO:0005515
Blo12g01017 444 PANTHER IQ-DOMAIN 5-RELATED 1 438 - -
Blo12g01017 444 MobiDBLite consensus disorder prediction 12 30 - -
Blo12g01017 444 MobiDBLite consensus disorder prediction 303 371 - -
Blo12g01017 444 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Blo12g01017 444 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Blo01g01460 Blo12g01017 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01017 Blo-Chr12:28111644 Blo18g00281 Blo-Chr18:2953121 5.71E-86 dispersed
Blo01g01460 Blo-Chr1:53769300 Blo12g01017 Blo-Chr12:28111644 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01017 - - qsu:112015613 587.415