Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Blo12g01033 ATGAATCCAGATCCCACGAACGAGAGGCTGGAAGCTCCGGTCTTGACAACATTAAGAACCCGGCGATCAAGCGCCGTCCGATCCCCGTCGACGATGGCCATCGCCACCGCCACCGCCATTGCAGTTCTTCCCAAATATCTAATAGGAGGGAGACCACCTTCCTTTCCCTGTTTGTTTGGTAAACTCATAGTCAATACCCTCACTGAACTTGAAGACGACCTCTTGCTAAATAGTTTTGAACTTGGCTTCGTTTTGCCAAACTTTGGGGCTATCTGCTCGGAGAACTCGCCTCTTGTATTTATAGCTGCAGATATAGAAAGGCGGATTGAGCAAGAAACAAAGGCCGAAAAGCATATTCAGAAACTCCTTCTACTTGGTGCTGGGGAGTCTGGAAAATCCACAATTTTTAAGCAGGCAAGGTTTTTTGTTTATTCATCTGCTAAATTATACTGTCCGATTATAAAACTTTTGTTTCAAACTGGCTTTGATGAGGCCGAATTGAAAAGTTATACCTCGGTTGTCCATGCCAATGTATATCAGACTATAAAAATATTATATGATGGGTCGAAGGAGCTCTCCCAAAATGACGCAGATTCCTCAAAGTATGTCATATCCGGTGAAAATAAGGAAGTTGGGGAGAGACTATCTAAAATTGGAGGCGGATTGGATTACCCTCGTCTCACAAAAGAGCTTGCCCAAGATGTGGAAACTTTGTGGAAGGAAGCTGCTATACAGGAAACATATGCTCGTGGTAATGAACTCCAGGTTCCAGACTGTGCTCAATATTTCATGGGAAATTTGGAGCGATTATCTGACATAGAATATGTTCCAACCAAGGAGGATGTTCTCTATGCAAGAGTTCGTACAACAGGTGTAGTGGAGATTCAGTTCAGCCCGGTGGGAGAAAACAAGAAAAGTGGGGAAGTATACAGGCTCTTTGACGTTGGAGGTCAGAGAAATGAAAGGAGGAAGTGGATCCATCTATTTGAAGGTGTTTCAGCTGTAATCTTTTGTGCTGCCATTAGTGAGTATGATCAAACTCTCTTCGAAGATGAAAACAAAAACCGAATGATGGAGACAAAGGAACTCTTCGAGTGGGTGCTGAAACAAGAATGTTTTGAGAAAACGTCTTTCATGCTGTTTTTGAACAAATTTGACATATTCGAGAAGAAGGTTCTGAAGGTCCCACTGAATATCTGCAAATGGTTCAAAGATTACCACCCAGCTTCAAATGGAAAACAAGAGATTGAGCATGCCTATGAGTATGTGAAGAAGAAATTCGAGGAGCTGTATTTCCAGACCACTGCCCCGGATCGAGTGGACCGGGTTTTCAAGGTGTACAGGACGACTGCTCTTGATCAGAAACTCGTGAAGAAGGCTTTCAAGCTCGTCGACGAGACTCTAAGGCGGAGAAATCTCTTCGAGGCAGGCCTATTACGTACTTATGTGATTGTATTGTTATATGCGATCTTCGTTTTGGCTAATTGTGTGATTACTGAGATAATTTCAGATTTCTCTGCTGAGAGATCCTCGGACATTTTAGCAATTCCATCAGAAAATACCGATGTAGAATTCATTAATCAAAGATCATGTGAAGTTGAGAATCAAGAATGTGCTGGTCTATCTTATCCCAACTTGAAATGGACGAGTCATGCCACTGAACCCAAAACTGGCATTGAGTTTCCTGTGATGTTGGGTGATATTTTAGCAGGAGAGAACCTTTCCAACTTAAGATCAGAGGTACTCGTTGCTACTGGGTCCAGAAAAATGACAATATTCAAAATCAAATCTCTTAATGTATATGCTTTTGGCTTTTATGTTAATATGCACTCAGTCTTTGGCCCAAAATATTTTTCAATTTCAGCAGACAAACTAAACAAGGAGGAAATTGATATGACTGTTAGGCTTGTAGTTAATTGCAATGGGATAAAAATTAACACCGTGAAAGAGTATACAAATCCAGACGGTGATTATCAATGCTTGACAGCATTTAGTTCTTACTTTACCGAAGATATTGCCATACCTGCGGGTACAACAATTGATTTTCGACAAACTGCTGATGGGCGGCTAATAACTGAAATTGGAGGGTATGAGATTGGAGTAGTTCATAGTAAAGACTTGTGCAGGGCTTTCTTTGACATGTACATAGGAGAAGTTCCTGTATCTGAGCAAACAAAAGAAGAAATCGGCAGAAACGTCGCTAGTTGTTTCAGAAGATGCTAA 2223 41.48 MNPDPTNERLEAPVLTTLRTRRSSAVRSPSTMAIATATAIAVLPKYLIGGRPPSFPCLFGKLIVNTLTELEDDLLLNSFELGFVLPNFGAICSENSPLVFIAADIERRIEQETKAEKHIQKLLLLGAGESGKSTIFKQARFFVYSSAKLYCPIIKLLFQTGFDEAELKSYTSVVHANVYQTIKILYDGSKELSQNDADSSKYVISGENKEVGERLSKIGGGLDYPRLTKELAQDVETLWKEAAIQETYARGNELQVPDCAQYFMGNLERLSDIEYVPTKEDVLYARVRTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENKNRMMETKELFEWVLKQECFEKTSFMLFLNKFDIFEKKVLKVPLNICKWFKDYHPASNGKQEIEHAYEYVKKKFEELYFQTTAPDRVDRVFKVYRTTALDQKLVKKAFKLVDETLRRRNLFEAGLLRTYVIVLLYAIFVLANCVITEIISDFSAERSSDILAIPSENTDVEFINQRSCEVENQECAGLSYPNLKWTSHATEPKTGIEFPVMLGDILAGENLSNLRSEVLVATGSRKMTIFKIKSLNVYAFGFYVNMHSVFGPKYFSISADKLNKEEIDMTVRLVVNCNGIKINTVKEYTNPDGDYQCLTAFSSYFTEDIAIPAGTTIDFRQTADGRLITEIGGYEIGVVHSKDLCRAFFDMYIGEVPVSEQTKEEIGRNVASCFRRC 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 28207603 28217186 - BLOR05052 Blo12g01033 68294

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Blo12g01033 740 Gene3D - 554 715 IPR016088 -
Blo12g01033 740 Gene3D - 121 467 IPR027417 -
Blo12g01033 740 Gene3D - 163 288 IPR011025 GO:0007165
Blo12g01033 740 PRINTS Alpha G protein (transducin) signature 332 360 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 PRINTS Alpha G protein (transducin) signature 310 327 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 PRINTS Alpha G protein (transducin) signature 275 297 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 PRINTS Alpha G protein (transducin) signature 121 136 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 PRINTS Alpha G protein (transducin) signature 378 387 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 CDD G-alpha 120 473 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 101 479 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 Pfam G-protein alpha subunit 104 467 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 Pfam Chalcone isomerase like 655 729 IPR016087 GO:0016872
Blo12g01033 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 476 IPR027417 -
Blo12g01033 740 Gene3D - 611 730 IPR016089 -
Blo12g01033 740 SUPERFAMILY Transducin (alpha subunit), insertion domain 162 287 IPR011025 GO:0007165
Blo12g01033 740 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 101 479 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 ProSiteProfiles G-alpha domain profile. 118 479 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Blo12g01033 740 SUPERFAMILY Chalcone isomerase 554 737 IPR036298 GO:0016872
Blo12g01033 740 PRINTS Plant G protein alpha subunit signature 431 443 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 PRINTS Plant G protein alpha subunit signature 295 310 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 PRINTS Plant G protein alpha subunit signature 365 376 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 PRINTS Plant G protein alpha subunit signature 107 116 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 PRINTS Plant G protein alpha subunit signature 414 429 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Blo12g01033 740 SMART galpha_1 99 478 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Blo12g01033 K19729 GNAT3; guanine nucleotide-binding protein G(t) subunit alpha 3 - nnu:104600554 655.21
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Blo01g01439 Blo12g01033 BCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Blo12g01033 Blo-Chr12:28207603 Blo15g00023 Blo-Chr15:168508 1.81E-52 dispersed
Blo06g00446 Blo-Chr6:25372234 Blo12g01033 Blo-Chr12:28207603 3.68E-18 transposed
Blo01g01439 Blo-Chr1:53256025 Blo12g01033 Blo-Chr12:28207603 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g171 Blo01g01439 Blo12g01033 Bda01g00643 Bda03g00121 . Bpe02g00514 . Bma01g02190 . . . . Car09g00318 . . . Cpe06g00263 . . . . . . . Cla05g01634 Cam05g1743 Cec05g1752 Cco05g1809 Clacu05g1735 Cmu05g1619 Cre05g1747 Cone4ag1703 Cone7ag1619 . . Lsi04g01381 . . . . . . . . Bpe04g00106 . . . . Cmo09g00370 Cma09g00371 . Car01g01312 . . Cpe02g00295 Bhi09g03073 Tan01g3487 . . Hepe01g1922 . . . . . . . . . . . . Cme07g00170
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004075 2 3 2 1 2 1 1 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 0 0 7 2 1 44
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Blo12g01033 Blo_Chr12 FPKM 9.016175 10.667688 11.432597 13.00216 12.041877 12.858909 10.793069 21.620132 22.717949 22.94902